RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 SS18L1O75177 396 aaPredicted RBP11.52□□□□□ -0.57
SGCA-201ENST00000262018 GATBO75879 557 aaKnown RBP11.52□□□□□ -0.57
SGCA-201ENST00000262018 CLEC2LP0C7M8 214 aa11.52□□□□□ -0.57
SGCA-201ENST00000262018 PTBP1P26599 531 aaKnown RBP eCLIP11.52□□□□□ -0.57
SGCA-201ENST00000262018 MXD1Q05195 221 aa11.52□□□□□ -0.57
SGCA-201ENST00000262018 RASGEF1BQ0VAM2 473 aa11.52□□□□□ -0.57
SGCA-201ENST00000262018 ACSM3Q53FZ2 586 aa11.52□□□□□ -0.57
SGCA-201ENST00000262018 CEACAM19Q7Z692 300 aa11.52□□□□□ -0.57
SGCA-201ENST00000262018 KRT77Q7Z794 578 aa11.52□□□□□ -0.57
SGCA-201ENST00000262018 DTX2Q86UW9 622 aa11.52□□□□□ -0.57
SGCA-201ENST00000262018 C20orf196Q8IYI0 205 aa11.52□□□□□ -0.57
SGCA-201ENST00000262018 MFSD4AQ8N468 514 aa11.52□□□□□ -0.57
SGCA-201ENST00000262018 OR6N1Q8NGY5 312 aa11.52□□□□□ -0.57
SGCA-201ENST00000262018 FAM168AQ92567 244 aa11.52□□□□□ -0.57
SGCA-201ENST00000262018 MAP6Q96JE9 813 aa11.52□□□□□ -0.57
SGCA-201ENST00000262018 MROQ9BYG7 248 aa11.52□□□□□ -0.57
SGCA-201ENST00000262018 SP140LQ9H930 580 aa11.52□□□□□ -0.57
SGCA-201ENST00000262018 BCO1Q9HAY6 547 aa11.52□□□□□ -0.57
SGCA-201ENST00000262018 ELOVL3Q9HB03 270 aa11.52□□□□□ -0.57
SGCA-201ENST00000262018 CISD1Q9NZ45 108 aaKnown RBP11.52□□□□□ -0.57
SGCA-201ENST00000262018 EMC3Q9P0I2 261 aa11.52□□□□□ -0.57
SGCA-201ENST00000262018 CLEC4AQ9UMR7 237 aa11.52□□□□□ -0.57
SGCA-201ENST00000262018 ZNF281Q9Y2X9 895 aa11.52□□□□□ -0.57
SGCA-201ENST00000262018 EMC9Q9Y3B6 208 aa11.52□□□□□ -0.57
SGCA-201ENST00000262018 IGKV3D-15A0A087WSY6 115 aa11.51□□□□□ -0.57
SGCA-201ENST00000262018 SHISA3A0PJX4 238 aa11.51□□□□□ -0.57
SGCA-201ENST00000262018 GPR171O14626 319 aa11.51□□□□□ -0.57
SGCA-201ENST00000262018 ZNF254O75437 659 aa11.51□□□□□ -0.57
SGCA-201ENST00000262018 RPP14O95059 124 aaKnown RBP11.51□□□□□ -0.57
SGCA-201ENST00000262018 SELENOPP49908 381 aa11.51□□□□□ -0.57
SGCA-201ENST00000262018 RIDAP52758 137 aaKnown RBP11.51□□□□□ -0.57
SGCA-201ENST00000262018 DEFA1P59665 94 aa11.51□□□□□ -0.57
SGCA-201ENST00000262018 DEFA3P59666 94 aa11.51□□□□□ -0.57
SGCA-201ENST00000262018 YIF1BQ5BJH7 314 aa11.51□□□□□ -0.57
SGCA-201ENST00000262018 ZMAT1Q5H9K5 638 aa11.51□□□□□ -0.57
SGCA-201ENST00000262018 PHYHD1Q5SRE7 291 aa11.51□□□□□ -0.57
SGCA-201ENST00000262018 DEGS2Q6QHC5 323 aa11.51□□□□□ -0.57
SGCA-201ENST00000262018 LRRN1Q6UXK5 716 aa11.51□□□□□ -0.57
SGCA-201ENST00000262018 DCXRQ7Z4W1 244 aa11.51□□□□□ -0.57
SGCA-201ENST00000262018 OR6K3Q8NGY3 331 aa11.51□□□□□ -0.57
SGCA-201ENST00000262018 OR2G2Q8NGZ5 317 aa11.51□□□□□ -0.57
SGCA-201ENST00000262018 RNF133Q8WVZ7 376 aa11.51□□□□□ -0.57
SGCA-201ENST00000262018 HSD17B8Q92506 261 aa11.51□□□□□ -0.57
SGCA-201ENST00000262018 PHYHIPQ92561 330 aa11.51□□□□□ -0.57
SGCA-201ENST00000262018 TMEM45BQ96B21 275 aa11.51□□□□□ -0.57
SGCA-201ENST00000262018 S100PBPQ96BU1 408 aa11.51□□□□□ -0.57
SGCA-201ENST00000262018 CEP19Q96LK0 163 aa11.51□□□□□ -0.57
SGCA-201ENST00000262018 PDCD1LG2Q9BQ51 273 aa11.51□□□□□ -0.57
SGCA-201ENST00000262018 CACNG6Q9BXT2 260 aa11.51□□□□□ -0.57
SGCA-201ENST00000262018 C6orf62Q9GZU0 229 aaPredicted RBP11.51□□□□□ -0.57
SGCA-201ENST00000262018 OR10A4Q9H209 315 aa11.51□□□□□ -0.57
SGCA-201ENST00000262018 NGBQ9NPG2 151 aa11.51□□□□□ -0.57
SGCA-201ENST00000262018 POLE4Q9NR33 117 aa11.51□□□□□ -0.57
SGCA-201ENST00000262018 FRRS1LQ9P0K9 344 aa11.51□□□□□ -0.57
SGCA-201ENST00000262018 CYB5R1Q9UHQ9 305 aa11.51□□□□□ -0.57
SGCA-201ENST00000262018 OR4C45A6NMZ5 311 aa11.5□□□□□ -0.57
SGCA-201ENST00000262018 ZNF724A8MTY0 619 aa11.5□□□□□ -0.57
SGCA-201ENST00000262018 PFDN1O60925 122 aa11.5□□□□□ -0.57
SGCA-201ENST00000262018 SLC43A1O75387 559 aa11.5□□□□□ -0.57
SGCA-201ENST00000262018 SRSF10O75494 262 aaKnown RBP11.5□□□□□ -0.57
SGCA-201ENST00000262018 ZFPL1O95159 310 aa11.5□□□□□ -0.57
SGCA-201ENST00000262018 WNT11O96014 354 aa11.5□□□□□ -0.57
SGCA-201ENST00000262018 YES1P07947 543 aa11.5□□□□□ -0.57
SGCA-201ENST00000262018 UCHL1P09936 223 aa11.5□□□□□ -0.57
SGCA-201ENST00000262018 OCM2P0CE71 109 aa11.5□□□□□ -0.57
SGCA-201ENST00000262018 OCMP0CE72 109 aaPredicted RBP11.5□□□□□ -0.57
SGCA-201ENST00000262018 BMP4P12644 408 aa11.5□□□□□ -0.57
SGCA-201ENST00000262018 AGTR1P30556 359 aa11.5□□□□□ -0.57
SGCA-201ENST00000262018 CCR9P51686 369 aa11.5□□□□□ -0.57
SGCA-201ENST00000262018 HNRNPA0Q13151 305 aaKnown RBP11.5□□□□□ -0.57
SGCA-201ENST00000262018 TRIM16LQ309B1 348 aa11.5□□□□□ -0.57
SGCA-201ENST00000262018 BEND4Q6ZU67 534 aa11.5□□□□□ -0.57
SGCA-201ENST00000262018 TPRA1Q86W33 373 aa11.5□□□□□ -0.57
SGCA-201ENST00000262018 LINC00346Q8IVM7 164 aa11.5□□□□□ -0.57
SGCA-201ENST00000262018 STEAP2Q8NFT2 490 aa11.5□□□□□ -0.57
SGCA-201ENST00000262018 OR13C5Q8NGS8 318 aa11.5□□□□□ -0.57
SGCA-201ENST00000262018 SETD6Q8TBK2 473 aa11.5□□□□□ -0.57
SGCA-201ENST00000262018 C10orf105Q8TEF2 133 aa11.5□□□□□ -0.57
SGCA-201ENST00000262018 ACOT12Q8WYK0 555 aa11.5□□□□□ -0.57
SGCA-201ENST00000262018 RGP1Q92546 391 aaPredicted RBP11.5□□□□□ -0.57
SGCA-201ENST00000262018 MSI2Q96DH6 328 aaKnown RBP11.5□□□□□ -0.57
SGCA-201ENST00000262018 C4orf45Q96LM5 186 aa11.5□□□□□ -0.57
SGCA-201ENST00000262018 PPIL3Q9H2H8 161 aaKnown RBP11.5□□□□□ -0.57
SGCA-201ENST00000262018 TPK1Q9H3S4 243 aa11.5□□□□□ -0.57
SGCA-201ENST00000262018 SMURF1Q9HCE7 757 aa11.5□□□□□ -0.57
SGCA-201ENST00000262018 ADAM30Q9UKF2 790 aa11.5□□□□□ -0.57
SGCA-201ENST00000262018 LRP12Q9Y561 859 aa11.5□□□□□ -0.57
SGCA-201ENST00000262018 LHFPL6Q9Y693 200 aa11.5□□□□□ -0.57
SGCA-201ENST00000262018 CADP27708 2225 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 TRAV1-2A0A0B4J238 106 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 TRBV5-5A0A0J9YX44 114 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 TMEM212A6NML5 194 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 DHHO43323 396 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 UPK1BO75841 260 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 PTTG1O95997 202 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 PSMB1P20618 241 aaKnown RBP11.49□□□□□ -0.57
SGCA-201ENST00000262018 MYL9P24844 172 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 CDAP32320 146 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 DCTDP32321 178 aa11.49□□□□□ -0.57
SGCA-201ENST00000262018 NTF4P34130 210 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms