RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 NOTCH2Q04721 2471 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 LRP5LA4QPB2 252 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 MPTX1A8MV57 137 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 HCN1O60741 890 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 KIR2DL3P43628 341 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 SMSP52788 366 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 ACTA2P62736 377 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 ACTG2P63267 376 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 PSG4Q00888 419 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 SELENBP1Q13228 472 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 CAMK2DQ13557 499 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 SGCBQ16585 318 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 HACD4Q5VWC8 232 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 JMJD6Q6NYC1 403 aaPredicted RBP4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 KCTD18Q6PI47 426 aaPredicted RBP4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 USP43Q70EL4 1123 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 TMPRSS12Q86WS5 348 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 UPRTQ96BW1 309 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 GPER1Q99527 375 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 CDC6Q99741 560 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 ZNRD1Q9P1U0 126 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 TP53TG5Q9Y2B4 290 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 TRAPPC13A5PLN9 417 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 RGS10O43665 173 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 RPL5P46777 297 aaKnown RBP4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 NOVA1P51513 510 aaKnown RBP4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 FOXD4Q12950 439 aaPredicted RBP4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 SWI5Q1ZZU3 235 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 GDPD3Q7L5L3 318 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 TUSC5Q8IXB3 177 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 NINJ1Q92982 152 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 RFT1Q96AA3 541 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 OPA3Q9H6K4 179 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 SLC7A11Q9UPY5 501 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 CACNG2Q9Y698 323 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 TMED7-TICAM2A0A0A6YYA0 188 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 CGB1A6NKQ9 187 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 KHNYNO15037 678 aaKnown RBP4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 HNRNPCP07910 306 aaKnown RBP eCLIP4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 CPT2P23786 658 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 PSMB10P40306 273 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 NPBWR2P48146 333 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 AADACL3Q5VUY0 350 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 HCP5Q6MZN7 132 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 FAM219AQ8IW50 185 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 ASCC1Q8N9N2 400 aaKnown RBP4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 SPRYD4Q8WW59 207 aaPredicted RBP4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 ABHD6Q9BV23 337 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 CHMP1AQ9HD42 196 aaPredicted RBP4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 TMED7Q9Y3B3 224 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 LRP12Q9Y561 859 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 MGAM2Q2M2H8 2515 aa4.8□□□□□ -1.64
TOPBP1-201ENST00000260810 F8P00451 2351 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 PRSS37A4D1T9 235 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 DISC1C4P0D8 188 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 BCKDKO14874 412 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 MMP23AO75900 390 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 MRPL3P09001 348 aaKnown RBP4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 PCBD1P61457 104 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 POU6F2P78424 691 aaPredicted RBP4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 C1orf140Q5VVS0 124 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 C11orf71Q6IPW1 123 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 GALNTL5Q7Z4T8 443 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 SGK3Q96BR1 496 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 WDFY2Q96P53 400 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 MND1Q9BWT6 205 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 ACKR4Q9NPB9 350 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 DECR2Q9NUI1 292 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 SLC39A1Q9NY26 324 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 MALT1Q9UDY8 824 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 FIGNL2A6NMB9 653 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 RRP8O43159 456 aaKnown RBP4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 RAD1O60671 282 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 ZNF205O95201 554 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 SERPINA7P05543 415 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 NAT2P11245 290 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 HSD11B1P28845 292 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 CSNK2A1P68400 391 aaPredicted RBP4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 ZNF829Q3KNS6 432 aaPredicted RBP4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 OTOSQ8NHW6 89 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 SLAMF9Q96A28 289 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 HSPBAP1Q96EW2 488 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 TMEM204Q9BSN7 226 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 PIPOXQ9P0Z9 390 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 TINAGQ9UJW2 476 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 PTRH2Q9Y3E5 179 aaKnown RBP4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 RAB27BO00194 218 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 SCO2O43819 266 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 DBIP07108 87 aaKnown RBP4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 CSF3P09919 207 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 APEHP13798 732 aaKnown RBP4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 ZBED5Q49AG3 693 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 STEAP3Q658P3 488 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 STAC2Q6ZMT1 411 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 AHSA2Q719I0 299 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 FAM90A1Q86YD7 464 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 IZUMO1Q8IYV9 350 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 OR5L1Q8NGL2 311 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 OR10D3Q8NH80 312 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 OIT3Q8WWZ8 545 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms