RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 A0A1W2PPZ6 126 aa15.19■□□□□ 0.02
SRSF1-201ENST00000258962 NKX2-6A6NCS4 301 aa15.19■□□□□ 0.02
SRSF1-201ENST00000258962 FABP12A6NFH5 140 aa15.19■□□□□ 0.02
SRSF1-201ENST00000258962 IFITM5A6NNB3 132 aa15.19■□□□□ 0.02
SRSF1-201ENST00000258962 M0R135 149 aa15.19■□□□□ 0.02
SRSF1-201ENST00000258962 SYT7O43581 403 aa15.19■□□□□ 0.02
SRSF1-201ENST00000258962 MAS1P04201 325 aa15.19■□□□□ 0.02
SRSF1-201ENST00000258962 CD2P06729 351 aa15.19■□□□□ 0.02
SRSF1-201ENST00000258962 CCL1P22362 96 aa15.19■□□□□ 0.02
SRSF1-201ENST00000258962 GRNP28799 593 aaKnown RBP15.19■□□□□ 0.02
SRSF1-201ENST00000258962 OPRM1P35372 400 aa15.19■□□□□ 0.02
SRSF1-201ENST00000258962 PSMD7P51665 324 aa15.19■□□□□ 0.02
SRSF1-201ENST00000258962 HGFACQ04756 655 aa15.19■□□□□ 0.02
SRSF1-201ENST00000258962 SFRP5Q5T4F7 317 aa15.19■□□□□ 0.02
SRSF1-201ENST00000258962 HES5Q5TA89 166 aa15.19■□□□□ 0.02
SRSF1-201ENST00000258962 FBXW9Q5XUX1 488 aa15.19■□□□□ 0.02
SRSF1-201ENST00000258962 TFAP2EQ6VUC0 442 aa15.19■□□□□ 0.02
SRSF1-201ENST00000258962 LIX1LQ8IVB5 337 aa15.19■□□□□ 0.02
SRSF1-201ENST00000258962 GDPD1Q8N9F7 314 aa15.19■□□□□ 0.02
SRSF1-201ENST00000258962 NAXEQ8NCW5 288 aa15.19■□□□□ 0.02
SRSF1-201ENST00000258962 OR5H6Q8NGV6 325 aa15.19■□□□□ 0.02
SRSF1-201ENST00000258962 TRMT10AQ8TBZ6 339 aaKnown RBP15.19■□□□□ 0.02
SRSF1-201ENST00000258962 LRRC46Q96FV0 321 aa15.19■□□□□ 0.02
SRSF1-201ENST00000258962 ZNF799Q96GE5 643 aa15.19■□□□□ 0.02
SRSF1-201ENST00000258962 SOX7Q9BT81 388 aa15.19■□□□□ 0.02
SRSF1-201ENST00000258962 OCEL1Q9H607 264 aa15.19■□□□□ 0.02
SRSF1-201ENST00000258962 ZNF275Q9NSD4 429 aaPredicted RBP15.19■□□□□ 0.02
SRSF1-201ENST00000258962 TBCCD1Q9NVR7 557 aa15.19■□□□□ 0.02
SRSF1-201ENST00000258962 TAS2R4Q9NYW5 299 aa15.19■□□□□ 0.02
SRSF1-201ENST00000258962 FOXJ3Q9UPW0 622 aa15.19■□□□□ 0.02
SRSF1-201ENST00000258962 UTP20O75691 2785 aaKnown RBP15.19■□□□□ 0.02
SRSF1-201ENST00000258962 A0A1B0GVI7 797 aa15.18■□□□□ 0.02
SRSF1-201ENST00000258962 ZNF503-AS2A6NEH8 195 aa15.18■□□□□ 0.02
SRSF1-201ENST00000258962 AIPO00170 330 aa15.18■□□□□ 0.02
SRSF1-201ENST00000258962 IL18BPO95998 194 aa15.18■□□□□ 0.02
SRSF1-201ENST00000258962 IGLV3-1P01715 115 aa15.18■□□□□ 0.02
SRSF1-201ENST00000258962 ITGA5P08648 1049 aa15.18■□□□□ 0.02
SRSF1-201ENST00000258962 OCMP0CE72 109 aaPredicted RBP15.18■□□□□ 0.02
SRSF1-201ENST00000258962 SNRPBP14678 240 aaKnown RBP15.18■□□□□ 0.02
SRSF1-201ENST00000258962 ELK1P19419 428 aa15.18■□□□□ 0.02
SRSF1-201ENST00000258962 ECH1Q13011 328 aa15.18■□□□□ 0.02
SRSF1-201ENST00000258962 CNIH2Q6PI25 160 aa15.18■□□□□ 0.02
SRSF1-201ENST00000258962 FAM131AQ6UXB0 335 aa15.18■□□□□ 0.02
SRSF1-201ENST00000258962 DCDC5Q6ZRR9 648 aa15.18■□□□□ 0.02
SRSF1-201ENST00000258962 FAM214BQ7L5A3 538 aa15.18■□□□□ 0.02
SRSF1-201ENST00000258962 SPTSSAQ969W0 71 aa15.18■□□□□ 0.02
SRSF1-201ENST00000258962 PGAM5Q96HS1 289 aa15.18■□□□□ 0.02
SRSF1-201ENST00000258962 LYZL4Q96KX0 146 aa15.18■□□□□ 0.02
SRSF1-201ENST00000258962 SOSTQ9BQB4 213 aa15.18■□□□□ 0.02
SRSF1-201ENST00000258962 GPR84Q9NQS5 396 aa15.18■□□□□ 0.02
SRSF1-201ENST00000258962 ABCB10Q9NRK6 738 aa15.18■□□□□ 0.02
SRSF1-201ENST00000258962 ABRACLQ9P1F3 81 aa15.18■□□□□ 0.02
SRSF1-201ENST00000258962 RTTNQ86VV8 2226 aa15.18■□□□□ 0.02
SRSF1-201ENST00000258962 APOA1P02647 267 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 EIF4EP06730 217 aaKnown RBP15.17■□□□□ 0.02
SRSF1-201ENST00000258962 COX6B1P14854 86 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 MPGP29372 298 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 TALDO1P37837 337 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 HTR5AP47898 357 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 SLC6A9P48067 706 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 EVX1P49640 407 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 PABPC1L2AQ5JQF8 200 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 DRAM2Q6UX65 266 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 ABHD12BQ7Z5M8 362 aaPredicted RBP15.17■□□□□ 0.02
SRSF1-201ENST00000258962 LUZP2Q86TE4 346 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 CENPSQ8N2Z9 138 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 SAMD12Q8N8I0 201 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 OR1J2Q8NGS2 313 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 FGGYQ96C11 551 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 ADAT3Q96EY9 351 aaPredicted RBP15.17■□□□□ 0.02
SRSF1-201ENST00000258962 SFXN3Q9BWM7 321 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 SRRQ9GZT4 340 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 SP140LQ9H930 580 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 NOX3Q9HBY0 568 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 RABL2AQ9UBK7 228 aaPredicted RBP15.17■□□□□ 0.02
SRSF1-201ENST00000258962 RABL2BQ9UNT1 228 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 A0A1B0GVG6 124 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 ANXA2P2A6NMY6 339 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 TBX1O43435 398 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 APOC1P02654 83 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 CRHP06850 196 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 KIR2DL2P43627 348 aaPredicted RBP15.17■□□□□ 0.02
SRSF1-201ENST00000258962 SNAI3Q3KNW1 292 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 SLC36A2Q495M3 483 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 LYSMD2Q8IV50 215 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 CPEB3Q8NE35 698 aaKnown RBP15.17■□□□□ 0.02
SRSF1-201ENST00000258962 OR51A2Q8NGJ7 313 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 OR1K1Q8NGR3 316 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 SETD6Q8TBK2 473 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 LGALS14Q8TCE9 139 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 CMTM3Q96MX0 182 aa15.17■□□□□ 0.02
SRSF1-201ENST00000258962 SETXQ7Z333 2677 aaKnown RBP15.16■□□□□ 0.02
SRSF1-201ENST00000258962 A0A0U1RQV5 110 aa15.16■□□□□ 0.02
SRSF1-201ENST00000258962 HLA-HP01893 362 aa15.16■□□□□ 0.02
SRSF1-201ENST00000258962 CFPP27918 469 aa15.16■□□□□ 0.02
SRSF1-201ENST00000258962 TPTEP56180 551 aa15.16■□□□□ 0.02
SRSF1-201ENST00000258962 CLDN12P56749 244 aa15.16■□□□□ 0.02
SRSF1-201ENST00000258962 FOXF2Q12947 444 aa15.16■□□□□ 0.02
SRSF1-201ENST00000258962 MADCAM1Q13477 382 aa15.16■□□□□ 0.02
SRSF1-201ENST00000258962 OXA1LQ15070 435 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms