RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 PSENENQ9NZ42 101 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 TRGV10A0A0A0MS01 117 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 A0A0B4J203 849 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 IGHV5-51A0A0C4DH38 117 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 ALG1L2C9J202 215 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 TXNL1O43396 289 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 GPX5O75715 221 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 ZNF816Q0VGE8 651 aaPredicted RBP7.85□□□□□ -1.15
PTCD3-201ENST00000254630 CDK5R1Q15078 307 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 FAHD1Q6P587 224 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 BAGE3Q86Y29 109 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 BAGE2Q86Y30 109 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 GPX8Q8TED1 209 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 SEH1LQ96EE3 360 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 MYOZ1Q9NP98 299 aaPredicted RBP7.85□□□□□ -1.15
PTCD3-201ENST00000254630 LRP12Q9Y561 859 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 RAB19A4D1S5 217 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 GALR2O43603 387 aaPredicted RBP7.85□□□□□ -1.15
PTCD3-201ENST00000254630 TLE1Q04724 770 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 FUT7Q11130 342 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 RAB35Q15286 201 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 PCK2Q16822 640 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 OR10G3Q8NGC4 313 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 CT55Q8WUE5 264 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 DHHO43323 396 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 NME2P1O60361 137 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 SBK3P0C264 359 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 SLC25A6P12236 298 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 TAS2R45P59539 299 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 TRIP6Q15654 476 aaKnown RBP7.85□□□□□ -1.15
PTCD3-201ENST00000254630 PRICKLE4Q2TBC4 344 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 CEACAM16Q2WEN9 425 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 SPANXN5Q5MJ07 72 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 TMEM268Q5VZI3 342 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 LFNGQ8NES3 379 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 LILRB4Q8NHJ6 448 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 DDOQ99489 341 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 NIPSNAP3BQ9BS92 247 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 PPIL1Q9Y3C6 166 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 FCGR2CP31995 323 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 DHRS13Q6UX07 377 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 ZFP62Q8NB50 900 aaPredicted RBP7.85□□□□□ -1.15
PTCD3-201ENST00000254630 CDX2Q99626 313 aaPredicted RBP7.85□□□□□ -1.15
PTCD3-201ENST00000254630 PTDSS2Q9BVG9 487 aa7.85□□□□□ -1.15
PTCD3-201ENST00000254630 ESRP2Q9H6T0 727 aaKnown RBP7.85□□□□□ -1.15
PTCD3-201ENST00000254630 FGF20Q9NP95 211 aaPredicted RBP7.85□□□□□ -1.15
PTCD3-201ENST00000254630 RCL1Q9Y2P8 373 aaKnown RBP7.85□□□□□ -1.15
PTCD3-201ENST00000254630 ANKRD31Q8N7Z5 1873 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 NUPL2O15504 423 aaKnown RBP7.84□□□□□ -1.15
PTCD3-201ENST00000254630 IL9P15248 144 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 TGM1P22735 817 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 FABP6P51161 128 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 ZNF83P51522 516 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 BTN1A1Q13410 526 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 TMEM211Q6ICI0 200 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 MOB3BQ86TA1 216 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 SFT2D1Q8WV19 159 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 GALMQ96C23 342 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 YIPF6Q96EC8 236 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 TIMM9Q9Y5J7 89 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 TRAV17A0A0B4J275 112 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 K7EQS6 105 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 CELA2BP08218 269 aaPredicted RBP7.84□□□□□ -1.15
PTCD3-201ENST00000254630 POU2F2P09086 479 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 HES3Q5TGS1 186 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 BTLAQ7Z6A9 289 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 ZNF439Q8NDP4 499 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 OR10AD1Q8NGE0 317 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 MARC2Q969Z3 335 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 SIGLEC11Q96RL6 698 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 RPP25Q9BUL9 199 aaKnown RBP7.84□□□□□ -1.15
PTCD3-201ENST00000254630 NMES1Q9C002 83 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 IKZF5Q9H5V7 419 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 PRDM7Q9NQW5 492 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 ING1Q9UK53 422 aaPredicted RBP7.84□□□□□ -1.15
PTCD3-201ENST00000254630 ST3GAL6Q9Y274 331 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 TFAP2AP05549 437 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 ASAH1Q13510 395 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 PNLIPRP3Q17RR3 467 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 CREB3L2Q70SY1 520 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 KCNRGQ8N5I3 272 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 FBXO17Q96EF6 278 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 PLA2G12AQ9BZM1 189 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 ACTR3CQ9C0K3 210 aaPredicted RBP7.84□□□□□ -1.15
PTCD3-201ENST00000254630 MED9Q9NWA0 146 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 TMEM30CPA0ZSE6 113 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 TMEM235A6NFC5 223 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 ST8SIA3O43173 380 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 COX7A2P2O60397 106 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 NDUFA6P56556 154 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 NXPH1P58417 271 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 MPPED2Q15777 294 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.84□□□□□ -1.15
PTCD3-201ENST00000254630 M1APQ8TC57 530 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 SLC7A6Q92536 515 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 CLDN23Q96B33 292 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 ALKBH3Q96Q83 286 aaPredicted RBP7.84□□□□□ -1.15
PTCD3-201ENST00000254630 GABRG3Q99928 467 aa7.84□□□□□ -1.15
PTCD3-201ENST00000254630 STRAPQ9Y3F4 350 aaKnown RBP7.84□□□□□ -1.15
PTCD3-201ENST00000254630 KCNE1BA0A087WTH5 132 aa7.84□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms