RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 TSPO2Q5TGU0 170 aa20.42■□□□□ 0.86
SYNGR3-201ENST00000248121 DOK3Q7L591 496 aa20.42■□□□□ 0.86
SYNGR3-201ENST00000248121 TUSC5Q8IXB3 177 aa20.42■□□□□ 0.86
SYNGR3-201ENST00000248121 OR5AS1Q8N127 324 aa20.42■□□□□ 0.86
SYNGR3-201ENST00000248121 FGFBP3Q8TAT2 258 aa20.42■□□□□ 0.86
SYNGR3-201ENST00000248121 FOXRED1Q96CU9 486 aaPredicted RBP20.42■□□□□ 0.86
SYNGR3-201ENST00000248121 C7orf50Q9BRJ6 194 aaKnown RBP20.42■□□□□ 0.86
SYNGR3-201ENST00000248121 MYEF2Q9P2K5 600 aaKnown RBP20.42■□□□□ 0.86
SYNGR3-201ENST00000248121 LHX6Q9UPM6 363 aa20.42■□□□□ 0.86
SYNGR3-201ENST00000248121 TP53TG5Q9Y2B4 290 aa20.42■□□□□ 0.86
SYNGR3-201ENST00000248121 NOSIPQ9Y314 301 aaKnown RBP20.42■□□□□ 0.86
SYNGR3-201ENST00000248121 TGM6O95932 706 aa20.41■□□□□ 0.86
SYNGR3-201ENST00000248121 TRAPPC2P0DI81 140 aa20.41■□□□□ 0.86
SYNGR3-201ENST00000248121 TRAPPC2BP0DI82 140 aa20.41■□□□□ 0.86
SYNGR3-201ENST00000248121 GABRA1P14867 456 aa20.41■□□□□ 0.86
SYNGR3-201ENST00000248121 ZNF20P17024 532 aa20.41■□□□□ 0.86
SYNGR3-201ENST00000248121 RAB3AP20336 220 aa20.41■□□□□ 0.86
SYNGR3-201ENST00000248121 HLA-DMAP28067 261 aa20.41■□□□□ 0.86
SYNGR3-201ENST00000248121 SLC6A9P48067 706 aa20.41■□□□□ 0.86
SYNGR3-201ENST00000248121 CCR6P51684 374 aa20.41■□□□□ 0.86
SYNGR3-201ENST00000248121 ADGRE4PQ86SQ3 457 aa20.41■□□□□ 0.86
SYNGR3-201ENST00000248121 SORCS2Q96PQ0 1159 aa20.41■□□□□ 0.86
SYNGR3-201ENST00000248121 ATG5Q9H1Y0 275 aa20.41■□□□□ 0.86
SYNGR3-201ENST00000248121 DPAGT1Q9H3H5 408 aa20.41■□□□□ 0.86
SYNGR3-201ENST00000248121 M0R135 149 aa20.41■□□□□ 0.86
SYNGR3-201ENST00000248121 SGCEO43556 437 aa20.41■□□□□ 0.86
SYNGR3-201ENST00000248121 GMDSO60547 372 aa20.41■□□□□ 0.86
SYNGR3-201ENST00000248121 TCRBP04435 133 aa20.41■□□□□ 0.86
SYNGR3-201ENST00000248121 RAB35Q15286 201 aa20.41■□□□□ 0.86
SYNGR3-201ENST00000248121 ZNF774Q6NX45 483 aa20.41■□□□□ 0.86
SYNGR3-201ENST00000248121 SLC22A24Q8N4F4 322 aa20.41■□□□□ 0.86
SYNGR3-201ENST00000248121 C15orf40Q8WUR7 153 aa20.41■□□□□ 0.86
SYNGR3-201ENST00000248121 ZNF799Q96GE5 643 aa20.41■□□□□ 0.86
SYNGR3-201ENST00000248121 METTL17Q9H7H0 456 aaPredicted RBP20.41■□□□□ 0.86
SYNGR3-201ENST00000248121 HRASLSQ9HDD0 168 aa20.41■□□□□ 0.86
SYNGR3-201ENST00000248121 DIABLOQ9NR28 239 aa20.41■□□□□ 0.86
SYNGR3-201ENST00000248121 ZZEF1O43149 2961 aa20.4■□□□□ 0.86
SYNGR3-201ENST00000248121 TRAV18A0A075B6X5 111 aa20.4■□□□□ 0.86
SYNGR3-201ENST00000248121 ANKRD20A5PA0PJZ0 165 aa20.4■□□□□ 0.86
SYNGR3-201ENST00000248121 A8MV72 311 aaPredicted RBP20.4■□□□□ 0.86
SYNGR3-201ENST00000248121 RRP8O43159 456 aaKnown RBP20.4■□□□□ 0.86
SYNGR3-201ENST00000248121 SYNGR4O95473 234 aa20.4■□□□□ 0.86
SYNGR3-201ENST00000248121 CPN1P15169 458 aa20.4■□□□□ 0.86
SYNGR3-201ENST00000248121 ZNF32P17041 273 aa20.4■□□□□ 0.86
SYNGR3-201ENST00000248121 ID4P47928 161 aa20.4■□□□□ 0.86
SYNGR3-201ENST00000248121 HGFACQ04756 655 aa20.4■□□□□ 0.86
SYNGR3-201ENST00000248121 PLEKHN1Q494U1 663 aaPredicted RBP20.4■□□□□ 0.86
SYNGR3-201ENST00000248121 CACNG6Q9BXT2 260 aa20.4■□□□□ 0.86
SYNGR3-201ENST00000248121 SLCO5A1Q9H2Y9 848 aa20.4■□□□□ 0.86
SYNGR3-201ENST00000248121 NUDT15Q9NV35 164 aa20.4■□□□□ 0.86
SYNGR3-201ENST00000248121 PAQR5Q9NXK6 330 aaPredicted RBP20.4■□□□□ 0.86
SYNGR3-201ENST00000248121 MCTS1Q9ULC4 181 aaKnown RBP20.4■□□□□ 0.86
SYNGR3-201ENST00000248121 PIEZO2Q9H5I5 2752 aa20.39■□□□□ 0.86
SYNGR3-201ENST00000248121 A0A0U1RQV5 110 aa20.39■□□□□ 0.86
SYNGR3-201ENST00000248121 MKRN2OSH3BPM6 223 aa20.39■□□□□ 0.86
SYNGR3-201ENST00000248121 MRPL33O75394 65 aaKnown RBP20.39■□□□□ 0.86
SYNGR3-201ENST00000248121 BTG1P62324 171 aa20.39■□□□□ 0.86
SYNGR3-201ENST00000248121 TBRG1Q3YBR2 411 aa20.39■□□□□ 0.86
SYNGR3-201ENST00000248121 ATAD3CQ5T2N8 411 aa20.39■□□□□ 0.86
SYNGR3-201ENST00000248121 SFRP5Q5T4F7 317 aa20.39■□□□□ 0.86
SYNGR3-201ENST00000248121 CALHM2Q9HA72 323 aa20.39■□□□□ 0.86
SYNGR3-201ENST00000248121 SLC7A10Q9NS82 523 aa20.39■□□□□ 0.86
SYNGR3-201ENST00000248121 TRAV6A0A075B6T7 132 aa20.39■□□□□ 0.85
SYNGR3-201ENST00000248121 C1QTNF9BB2RNN3 333 aa20.39■□□□□ 0.85
SYNGR3-201ENST00000248121 C1QTNF9P0C862 333 aa20.39■□□□□ 0.85
SYNGR3-201ENST00000248121 SNAI3Q3KNW1 292 aa20.39■□□□□ 0.85
SYNGR3-201ENST00000248121 SKA3Q8IX90 412 aa20.39■□□□□ 0.85
SYNGR3-201ENST00000248121 PAQR4Q8N4S7 273 aaPredicted RBP20.39■□□□□ 0.85
SYNGR3-201ENST00000248121 SPACA5Q96QH8 159 aa20.39■□□□□ 0.85
SYNGR3-201ENST00000248121 GAL3ST1Q99999 423 aa20.39■□□□□ 0.85
SYNGR3-201ENST00000248121 UQCC2Q9BRT2 126 aa20.39■□□□□ 0.85
SYNGR3-201ENST00000248121 ECDO95905 644 aaPredicted RBP20.38■□□□□ 0.85
SYNGR3-201ENST00000248121 QRFPP83859 136 aa20.38■□□□□ 0.85
SYNGR3-201ENST00000248121 PSG4Q00888 419 aa20.38■□□□□ 0.85
SYNGR3-201ENST00000248121 GUCA2AQ02747 115 aa20.38■□□□□ 0.85
SYNGR3-201ENST00000248121 KRTAP27-1Q3LI81 207 aa20.38■□□□□ 0.85
SYNGR3-201ENST00000248121 Q6ZSR3 168 aa20.38■□□□□ 0.85
SYNGR3-201ENST00000248121 AKR7LQ8NHP1 331 aa20.38■□□□□ 0.85
SYNGR3-201ENST00000248121 SPTSSAQ969W0 71 aa20.38■□□□□ 0.85
SYNGR3-201ENST00000248121 PRRG4Q9BZD6 226 aa20.38■□□□□ 0.85
SYNGR3-201ENST00000248121 BCO1Q9HAY6 547 aa20.38■□□□□ 0.85
SYNGR3-201ENST00000248121 MYO7BQ6PIF6 2116 aa20.38■□□□□ 0.85
SYNGR3-201ENST00000248121 IGKV1-9A0A0C4DH69 117 aa20.38■□□□□ 0.85
SYNGR3-201ENST00000248121 OR6C6A6NF89 314 aa20.38■□□□□ 0.85
SYNGR3-201ENST00000248121 H7C417 338 aa20.38■□□□□ 0.85
SYNGR3-201ENST00000248121 SCRN3Q0VDG4 424 aa20.38■□□□□ 0.85
SYNGR3-201ENST00000248121 UNC119Q13432 240 aa20.38■□□□□ 0.85
SYNGR3-201ENST00000248121 MOGAT2Q3SYC2 334 aa20.38■□□□□ 0.85
SYNGR3-201ENST00000248121 OR5M9Q8NGP3 310 aa20.38■□□□□ 0.85
SYNGR3-201ENST00000248121 OR1F12Q8NHA8 337 aa20.38■□□□□ 0.85
SYNGR3-201ENST00000248121 PTX4Q96A99 478 aa20.38■□□□□ 0.85
SYNGR3-201ENST00000248121 LINC00470Q9BZP3 86 aa20.38■□□□□ 0.85
SYNGR3-201ENST00000248121 MTFP1Q9UDX5 166 aa20.38■□□□□ 0.85
SYNGR3-201ENST00000248121 POU2F3Q9UKI9 436 aa20.38■□□□□ 0.85
SYNGR3-201ENST00000248121 NUBP2Q9Y5Y2 271 aa20.38■□□□□ 0.85
SYNGR3-201ENST00000248121 V9GYS6 101 aa20.38■□□□□ 0.85
SYNGR3-201ENST00000248121 GTF3C1Q12789 2109 aa20.37■□□□□ 0.85
SYNGR3-201ENST00000248121 PGAP1Q75T13 922 aa20.37■□□□□ 0.85
SYNGR3-201ENST00000248121 SSC4DQ8WTU2 575 aa20.37■□□□□ 0.85
SYNGR3-201ENST00000248121 PRDM14Q9GZV8 571 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms