RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 RAB1BQ9H0U4 201 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 MS4A5Q9H3V2 200 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 ISYNA1Q9NPH2 558 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 SNTG1Q9NSN8 517 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 ZNF462Q96JM2 2506 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 DHRS3O75911 302 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 GRPP07492 148 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 OR4A8P0C604 315 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 SERPINF1P36955 418 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 MZT2AQ6P582 158 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 SPERTQ8NA61 448 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 OR2Z1Q8NG97 314 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 POM121L2Q96KW2 1035 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 DDX28Q9NUL7 540 aaKnown RBP9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 ING4Q9UNL4 249 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 SMIM31A0A1B0GVY4 71 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 CD300LBA8K4G0 201 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 J3QW42 95 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 KDM4BO94953 1096 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 MMP7P09237 267 aaPredicted RBP9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 GRNP28799 593 aaKnown RBP9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 LIPAP38571 399 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 MTCP1P56278 107 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 SPOCK1Q08629 439 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 NHLRC1Q6VVB1 395 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 RAB2BQ8WUD1 216 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 AP3S1Q92572 193 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 OR14A2Q96R54 314 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 ABCB9Q9NP78 766 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 CA10Q9NS85 328 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 FBXO9Q9UK97 447 aaPredicted RBP9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 ROS1P08922 2347 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 ANKRD61A6NGH8 418 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 NGFP01138 241 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 RAC2P15153 192 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 FAHP16930 419 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 RIN1Q13671 783 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 HLXQ14774 488 aaPredicted RBP9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 FBXL19-AS1Q494R0 122 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 ZDHHC23Q8IYP9 409 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 CLEC4MQ9H2X3 399 aaPredicted RBP9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 GPR173Q9NS66 373 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 PAK1IP1Q9NWT1 392 aaPredicted RBP9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 ADAM30Q9UKF2 790 aa9.64□□□□□ -0.87
TNFAIP3-201ENST00000237289 LRRC30A6NM36 301 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 FAM25AB3EWG3 89 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 FAM25CB3EWG5 89 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 FAM25GB3EWG6 89 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 C1QL1O75973 258 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 TNFRSF1AP19438 455 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 CRYGSP22914 178 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 APOBEC3AP31941 199 aaPredicted RBP9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 TALDO1P37837 337 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 SRP9P49458 86 aaKnown RBP9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 MFGE8Q08431 387 aaPredicted RBP9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 CLVS2Q5SYC1 327 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 ZNF627Q7L945 461 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 NAA40Q86UY6 237 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 FAM169BQ8N8A8 192 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 DNAJB11Q9UBS4 358 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 RSL24D1Q9UHA3 163 aaKnown RBP9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 USP24Q9UPU5 2620 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 LOC100509620A0A075B734 347 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 ZNF850A8MQ14 1090 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 ZFPL1O95159 310 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 CDRT1O95170 752 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 PCSK6P29122 969 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 INPP1P49441 399 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 ZNF81P51508 661 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 PRSS12P56730 875 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 UBE2UQ5VVX9 321 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 C16orf87Q6PH81 154 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 CATSPERDQ86XM0 798 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 MUC15Q8N387 334 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 GLS2Q9UI32 602 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 MGAQ8IWI9 3026 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 CA6P23280 308 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 GSK3AP49840 483 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 RPS25P62851 125 aaKnown RBP9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 DGUOKQ16854 277 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 CEP78Q5JTW2 689 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 GLYATL3Q5SZD4 288 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 RNLSQ5VYX0 342 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 GDPGP1Q6ZNW5 385 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 ELMOD3Q96FG2 381 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 LAMP3Q9UQV4 416 aa9.63□□□□□ -0.87
TNFAIP3-201ENST00000237289 ISPDA4D126 451 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 E9PI62 339 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 GABRPO00591 440 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 CD53P19397 219 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 GADD45AP24522 165 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 THBS4P35443 961 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 TLE4Q04727 773 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 IDNKQ5T6J7 187 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 DDI2Q5TDH0 399 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 RFPL4BQ6ZWI9 263 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 PHC2Q8IXK0 858 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 KLF14Q8TD94 323 aaPredicted RBP9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 PHYHIPQ92561 330 aa9.62□□□□□ -0.87
TNFAIP3-201ENST00000237289 PIGTQ969N2 578 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms