RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 FBXL17Q9UF56 701 aa12.79□□□□□ -0.36
SFXN3-201ENST00000224807 SLC17A4Q9Y2C5 497 aa12.79□□□□□ -0.36
SFXN3-201ENST00000224807 PCNX3Q9H6A9 2034 aa12.79□□□□□ -0.36
SFXN3-201ENST00000224807 K7EPK0 472 aa12.79□□□□□ -0.36
SFXN3-201ENST00000224807 UTS2O95399 124 aa12.79□□□□□ -0.36
SFXN3-201ENST00000224807 VSIG8P0DPA2 414 aa12.79□□□□□ -0.36
SFXN3-201ENST00000224807 FCGR2CP31995 323 aa12.79□□□□□ -0.36
SFXN3-201ENST00000224807 S100A12P80511 92 aa12.79□□□□□ -0.36
SFXN3-201ENST00000224807 ZNF674Q2M3X9 581 aa12.79□□□□□ -0.36
SFXN3-201ENST00000224807 ZNF343Q6P1L6 599 aa12.79□□□□□ -0.36
SFXN3-201ENST00000224807 FAM71E2Q8N5Q1 922 aa12.79□□□□□ -0.36
SFXN3-201ENST00000224807 DEFB119Q8N690 84 aa12.79□□□□□ -0.36
SFXN3-201ENST00000224807 RPS4Y2Q8TD47 263 aa12.79□□□□□ -0.36
SFXN3-201ENST00000224807 TSLPQ969D9 159 aa12.79□□□□□ -0.36
SFXN3-201ENST00000224807 SUCNR1Q9BXA5 334 aa12.79□□□□□ -0.36
SFXN3-201ENST00000224807 TBL1XR1Q9BZK7 514 aa12.79□□□□□ -0.36
SFXN3-201ENST00000224807 C5orf66Q9H5L9 145 aa12.79□□□□□ -0.36
SFXN3-201ENST00000224807 PRSS37A4D1T9 235 aa12.78□□□□□ -0.36
SFXN3-201ENST00000224807 DUS4LO95620 317 aaKnown RBP12.78□□□□□ -0.36
SFXN3-201ENST00000224807 GIMD1P0DJR0 217 aa12.78□□□□□ -0.36
SFXN3-201ENST00000224807 ACKR3P25106 362 aa12.78□□□□□ -0.36
SFXN3-201ENST00000224807 LAP3P28838 519 aa12.78□□□□□ -0.36
SFXN3-201ENST00000224807 RGS19P49795 217 aa12.78□□□□□ -0.36
SFXN3-201ENST00000224807 LINC00114Q6XXX2 140 aa12.78□□□□□ -0.36
SFXN3-201ENST00000224807 ABHD12BQ7Z5M8 362 aaPredicted RBP12.78□□□□□ -0.36
SFXN3-201ENST00000224807 CPEB2Q7Z5Q1 589 aaKnown RBP12.78□□□□□ -0.36
SFXN3-201ENST00000224807 PAQR4Q8N4S7 273 aaPredicted RBP12.78□□□□□ -0.36
SFXN3-201ENST00000224807 OR5H2Q8NGV7 314 aa12.78□□□□□ -0.36
SFXN3-201ENST00000224807 ZNF700Q9H0M5 742 aa12.78□□□□□ -0.36
SFXN3-201ENST00000224807 CARHSP1Q9Y2V2 147 aaKnown RBP12.78□□□□□ -0.36
SFXN3-201ENST00000224807 FRYLO94915 3013 aa12.78□□□□□ -0.36
SFXN3-201ENST00000224807 CLDN4O14493 209 aa12.78□□□□□ -0.36
SFXN3-201ENST00000224807 OR3A4PP47883 348 aa12.78□□□□□ -0.36
SFXN3-201ENST00000224807 GSK3AP49840 483 aa12.78□□□□□ -0.36
SFXN3-201ENST00000224807 RPS4XP62701 263 aaKnown RBP12.78□□□□□ -0.36
SFXN3-201ENST00000224807 DEFA6Q01524 100 aa12.78□□□□□ -0.36
SFXN3-201ENST00000224807 GAB4Q2WGN9 574 aa12.78□□□□□ -0.36
SFXN3-201ENST00000224807 ATG4DQ86TL0 474 aaPredicted RBP12.78□□□□□ -0.36
SFXN3-201ENST00000224807 SUMF1Q8NBK3 374 aa12.78□□□□□ -0.36
SFXN3-201ENST00000224807 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.78□□□□□ -0.36
SFXN3-201ENST00000224807 ARHGAP5-AS1Q96IT6 56 aa12.78□□□□□ -0.36
SFXN3-201ENST00000224807 PARPBPQ9NWS1 579 aa12.78□□□□□ -0.36
SFXN3-201ENST00000224807 MUC22E2RYF6 1773 aaPredicted RBP12.78□□□□□ -0.36
SFXN3-201ENST00000224807 IGKV1D-43A0A0B4J1Z2 117 aa12.77□□□□□ -0.36
SFXN3-201ENST00000224807 FGF16O43320 207 aa12.77□□□□□ -0.36
SFXN3-201ENST00000224807 OR8U8P0C7N1 319 aa12.77□□□□□ -0.36
SFXN3-201ENST00000224807 SMIM6P0DI80 62 aa12.77□□□□□ -0.36
SFXN3-201ENST00000224807 CD79AP11912 226 aa12.77□□□□□ -0.36
SFXN3-201ENST00000224807 ZNF20P17024 532 aa12.77□□□□□ -0.36
SFXN3-201ENST00000224807 ZNF93P35789 620 aaPredicted RBP12.77□□□□□ -0.36
SFXN3-201ENST00000224807 POU3F1Q03052 451 aaPredicted RBP12.77□□□□□ -0.36
SFXN3-201ENST00000224807 EGR3Q06889 387 aa12.77□□□□□ -0.36
SFXN3-201ENST00000224807 USF2Q15853 346 aaPredicted RBP12.77□□□□□ -0.36
SFXN3-201ENST00000224807 C14orf28Q4W4Y0 310 aa12.77□□□□□ -0.36
SFXN3-201ENST00000224807 DNM1P46Q6ZS02 220 aa12.77□□□□□ -0.36
SFXN3-201ENST00000224807 OR10D4PQ8NGN7 298 aa12.77□□□□□ -0.36
SFXN3-201ENST00000224807 FAM213BQ8TBF2 198 aa12.77□□□□□ -0.36
SFXN3-201ENST00000224807 RAB3CQ96E17 227 aa12.77□□□□□ -0.36
SFXN3-201ENST00000224807 PDE7BQ9NP56 450 aa12.77□□□□□ -0.36
SFXN3-201ENST00000224807 C5orf52A6NGY3 159 aa12.77□□□□□ -0.37
SFXN3-201ENST00000224807 IFNA2P01563 188 aa12.77□□□□□ -0.37
SFXN3-201ENST00000224807 IL12BP29460 328 aa12.77□□□□□ -0.37
SFXN3-201ENST00000224807 CDAP32320 146 aa12.77□□□□□ -0.37
SFXN3-201ENST00000224807 ECH1Q13011 328 aa12.77□□□□□ -0.37
SFXN3-201ENST00000224807 ZNF260Q3ZCT1 412 aa12.77□□□□□ -0.37
SFXN3-201ENST00000224807 ZNF383Q8NA42 475 aa12.77□□□□□ -0.37
SFXN3-201ENST00000224807 SLC30A7Q8NEW0 376 aa12.77□□□□□ -0.37
SFXN3-201ENST00000224807 NT5CQ8TCD5 201 aa12.77□□□□□ -0.37
SFXN3-201ENST00000224807 SH3BGRL3Q9H299 93 aa12.77□□□□□ -0.37
SFXN3-201ENST00000224807 FBP1P09467 338 aa12.77□□□□□ -0.37
SFXN3-201ENST00000224807 H2AFB1P0C5Y9 115 aa12.77□□□□□ -0.37
SFXN3-201ENST00000224807 RAB5AP20339 215 aa12.77□□□□□ -0.37
SFXN3-201ENST00000224807 S100PP25815 95 aa12.77□□□□□ -0.37
SFXN3-201ENST00000224807 RPL12P30050 165 aaKnown RBP12.77□□□□□ -0.37
SFXN3-201ENST00000224807 TMEM33P57088 247 aa12.77□□□□□ -0.37
SFXN3-201ENST00000224807 GLO1Q04760 184 aa12.77□□□□□ -0.37
SFXN3-201ENST00000224807 RUNX3Q13761 415 aa12.77□□□□□ -0.37
SFXN3-201ENST00000224807 KIR2DS3Q14952 304 aa12.77□□□□□ -0.37
SFXN3-201ENST00000224807 HIST2H3AQ71DI3 136 aa12.77□□□□□ -0.37
SFXN3-201ENST00000224807 EXD3Q8N9H8 876 aa12.77□□□□□ -0.37
SFXN3-201ENST00000224807 OR10H5Q8NGA6 315 aa12.77□□□□□ -0.37
SFXN3-201ENST00000224807 TERB2Q8NHR7 220 aa12.77□□□□□ -0.37
SFXN3-201ENST00000224807 SLC37A2Q8TED4 501 aa12.77□□□□□ -0.37
SFXN3-201ENST00000224807 CTHRC1Q96CG8 243 aa12.77□□□□□ -0.37
SFXN3-201ENST00000224807 CDC6Q99741 560 aa12.77□□□□□ -0.37
SFXN3-201ENST00000224807 THAP10Q9P2Z0 257 aaPredicted RBP12.77□□□□□ -0.37
SFXN3-201ENST00000224807 C2orf74A8MZ97 194 aa12.76□□□□□ -0.37
SFXN3-201ENST00000224807 S100A8P05109 93 aa12.76□□□□□ -0.37
SFXN3-201ENST00000224807 ASAH2BP0C7U1 165 aa12.76□□□□□ -0.37
SFXN3-201ENST00000224807 SMIM10L1P0DMW3 83 aa12.76□□□□□ -0.37
SFXN3-201ENST00000224807 GABRR1P24046 479 aa12.76□□□□□ -0.37
SFXN3-201ENST00000224807 S100A2P29034 98 aa12.76□□□□□ -0.37
SFXN3-201ENST00000224807 SLC25A1P53007 311 aa12.76□□□□□ -0.37
SFXN3-201ENST00000224807 ZNF117Q03924 483 aa12.76□□□□□ -0.37
SFXN3-201ENST00000224807 PDCD1Q15116 288 aa12.76□□□□□ -0.37
SFXN3-201ENST00000224807 CLEC12BQ2HXU8 276 aa12.76□□□□□ -0.37
SFXN3-201ENST00000224807 GFI1BQ5VTD9 330 aa12.76□□□□□ -0.37
SFXN3-201ENST00000224807 ZNF561Q8N587 486 aa12.76□□□□□ -0.37
SFXN3-201ENST00000224807 ERGIC1Q969X5 290 aa12.76□□□□□ -0.37
SFXN3-201ENST00000224807 SMIM10Q96HG1 83 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms