RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 PAQR4Q8N4S7 273 aaPredicted RBP19.64■□□□□ 0.74
CCDC9-201ENST00000221922 ACBD4Q8NC06 268 aa19.64■□□□□ 0.74
CCDC9-201ENST00000221922 CNTD2Q9H8S5 307 aa19.64■□□□□ 0.74
CCDC9-201ENST00000221922 VSIG4Q9Y279 399 aa19.64■□□□□ 0.74
CCDC9-201ENST00000221922 NR2C1P13056 603 aa19.64■□□□□ 0.73
CCDC9-201ENST00000221922 FOLR3P41439 243 aa19.64■□□□□ 0.73
CCDC9-201ENST00000221922 QRFPP83859 136 aa19.64■□□□□ 0.73
CCDC9-201ENST00000221922 ZMYND11Q15326 602 aa19.64■□□□□ 0.73
CCDC9-201ENST00000221922 SCGB2B2Q4G0G5 96 aa19.64■□□□□ 0.73
CCDC9-201ENST00000221922 GTPBP8Q8N3Z3 284 aaPredicted RBP19.64■□□□□ 0.73
CCDC9-201ENST00000221922 KCNRGQ8N5I3 272 aa19.64■□□□□ 0.73
CCDC9-201ENST00000221922 OR4S1Q8NGB4 309 aa19.64■□□□□ 0.73
CCDC9-201ENST00000221922 OR10S1Q8NGN2 331 aa19.64■□□□□ 0.73
CCDC9-201ENST00000221922 ST8SIA2Q92186 375 aa19.64■□□□□ 0.73
CCDC9-201ENST00000221922 FGGYQ96C11 551 aa19.64■□□□□ 0.73
CCDC9-201ENST00000221922 B3GNT4Q9C0J1 378 aa19.64■□□□□ 0.73
CCDC9-201ENST00000221922 LHFPL6Q9Y693 200 aa19.64■□□□□ 0.73
CCDC9-201ENST00000221922 ZNF726A6NNF4 738 aa19.63■□□□□ 0.73
CCDC9-201ENST00000221922 SULT2B1O00204 365 aa19.63■□□□□ 0.73
CCDC9-201ENST00000221922 LGALS8O00214 317 aa19.63■□□□□ 0.73
CCDC9-201ENST00000221922 TLX3O43711 291 aaPredicted RBP19.63■□□□□ 0.73
CCDC9-201ENST00000221922 ZBTB25P24278 435 aa19.63■□□□□ 0.73
CCDC9-201ENST00000221922 MPLP40238 635 aa19.63■□□□□ 0.73
CCDC9-201ENST00000221922 FOXK1P85037 733 aa19.63■□□□□ 0.73
CCDC9-201ENST00000221922 TFAP2EQ6VUC0 442 aa19.63■□□□□ 0.73
CCDC9-201ENST00000221922 FJX1Q86VR8 437 aa19.63■□□□□ 0.73
CCDC9-201ENST00000221922 TNFSF18Q9UNG2 199 aa19.63■□□□□ 0.73
CCDC9-201ENST00000221922 IGHEP01854 428 aa19.63■□□□□ 0.73
CCDC9-201ENST00000221922 HLA-AP01891 365 aaKnown RBP19.63■□□□□ 0.73
CCDC9-201ENST00000221922 BTN1A1Q13410 526 aa19.63■□□□□ 0.73
CCDC9-201ENST00000221922 ZNF528Q3MIS6 628 aa19.63■□□□□ 0.73
CCDC9-201ENST00000221922 RNASE10Q5GAN6 216 aaKnown RBP19.63■□□□□ 0.73
CCDC9-201ENST00000221922 LIN54Q6MZP7 749 aa19.63■□□□□ 0.73
CCDC9-201ENST00000221922 CFAP77Q6ZQR2 320 aa19.63■□□□□ 0.73
CCDC9-201ENST00000221922 C17orf107Q6ZR85 190 aa19.63■□□□□ 0.73
CCDC9-201ENST00000221922 TMPPEQ6ZT21 453 aa19.63■□□□□ 0.73
CCDC9-201ENST00000221922 FAM46BQ96A09 425 aa19.63■□□□□ 0.73
CCDC9-201ENST00000221922 MRGPRFQ96AM1 343 aa19.63■□□□□ 0.73
CCDC9-201ENST00000221922 NTNG2Q96CW9 530 aa19.63■□□□□ 0.73
CCDC9-201ENST00000221922 TRIM77I1YAP6 450 aa19.62■□□□□ 0.73
CCDC9-201ENST00000221922 M0R296 226 aa19.62■□□□□ 0.73
CCDC9-201ENST00000221922 CDK2AP1O14519 115 aa19.62■□□□□ 0.73
CCDC9-201ENST00000221922 OR2F2O95006 317 aa19.62■□□□□ 0.73
CCDC9-201ENST00000221922 BPNT1O95861 308 aa19.62■□□□□ 0.73
CCDC9-201ENST00000221922 IL2RAP01589 272 aa19.62■□□□□ 0.73
CCDC9-201ENST00000221922 CD63P08962 238 aa19.62■□□□□ 0.73
CCDC9-201ENST00000221922 GNALP38405 381 aa19.62■□□□□ 0.73
CCDC9-201ENST00000221922 SSR4P51571 173 aa19.62■□□□□ 0.73
CCDC9-201ENST00000221922 CXADRP78310 365 aa19.62■□□□□ 0.73
CCDC9-201ENST00000221922 UNC119Q13432 240 aa19.62■□□□□ 0.73
CCDC9-201ENST00000221922 OR2F1Q13607 317 aa19.62■□□□□ 0.73
CCDC9-201ENST00000221922 TAF13Q15543 124 aa19.62■□□□□ 0.73
CCDC9-201ENST00000221922 KCNMB1Q16558 191 aa19.62■□□□□ 0.73
CCDC9-201ENST00000221922 HIST3H3Q16695 136 aa19.62■□□□□ 0.73
CCDC9-201ENST00000221922 TCEAL6Q6IPX3 200 aa19.62■□□□□ 0.73
CCDC9-201ENST00000221922 C11orf87Q6NUJ2 197 aa19.62■□□□□ 0.73
CCDC9-201ENST00000221922 JMJD6Q6NYC1 403 aaPredicted RBP19.62■□□□□ 0.73
CCDC9-201ENST00000221922 LYG2Q86SG7 212 aa19.62■□□□□ 0.73
CCDC9-201ENST00000221922 ARMC10Q8N2F6 343 aa19.62■□□□□ 0.73
CCDC9-201ENST00000221922 ZDHHC22Q8N966 263 aa19.62■□□□□ 0.73
CCDC9-201ENST00000221922 OR1M1Q8NGA1 313 aa19.62■□□□□ 0.73
CCDC9-201ENST00000221922 OR5D14Q8NGL3 314 aa19.62■□□□□ 0.73
CCDC9-201ENST00000221922 ST8SIA4Q92187 359 aa19.62■□□□□ 0.73
CCDC9-201ENST00000221922 TCEAL3Q969E4 200 aa19.62■□□□□ 0.73
CCDC9-201ENST00000221922 NECAB3Q96P71 396 aaPredicted RBP19.62■□□□□ 0.73
CCDC9-201ENST00000221922 UQCC2Q9BRT2 126 aa19.62■□□□□ 0.73
CCDC9-201ENST00000221922 ANGPTL4Q9BY76 406 aa19.62■□□□□ 0.73
CCDC9-201ENST00000221922 RYDENQ9NUL5 291 aaKnown RBP19.62■□□□□ 0.73
CCDC9-201ENST00000221922 GPR160Q9UJ42 338 aa19.62■□□□□ 0.73
CCDC9-201ENST00000221922 NSG1A0A0A6YYJ2 146 aa19.61■□□□□ 0.73
CCDC9-201ENST00000221922 ZNF814B7Z6K7 855 aa19.61■□□□□ 0.73
CCDC9-201ENST00000221922 GABREP78334 506 aa19.61■□□□□ 0.73
CCDC9-201ENST00000221922 NKPD1Q17RQ9 610 aa19.61■□□□□ 0.73
CCDC9-201ENST00000221922 CDNFQ49AH0 187 aa19.61■□□□□ 0.73
CCDC9-201ENST00000221922 DCAF12Q5T6F0 453 aa19.61■□□□□ 0.73
CCDC9-201ENST00000221922 CARD17Q5XLA6 110 aa19.61■□□□□ 0.73
CCDC9-201ENST00000221922 TRAPPC6BQ86SZ2 158 aa19.61■□□□□ 0.73
CCDC9-201ENST00000221922 SLC22A24Q8N4F4 322 aa19.61■□□□□ 0.73
CCDC9-201ENST00000221922 RASL12Q9NYN1 266 aa19.61■□□□□ 0.73
CCDC9-201ENST00000221922 FBLN5Q9UBX5 448 aa19.61■□□□□ 0.73
CCDC9-201ENST00000221922 NOP16Q9Y3C1 178 aaKnown RBP19.61■□□□□ 0.73
CCDC9-201ENST00000221922 CLDN6P56747 220 aa19.61■□□□□ 0.73
CCDC9-201ENST00000221922 ZNF529Q6P280 563 aa19.61■□□□□ 0.73
CCDC9-201ENST00000221922 CD163Q86VB7 1156 aa19.61■□□□□ 0.73
CCDC9-201ENST00000221922 STPG2Q8N412 459 aa19.61■□□□□ 0.73
CCDC9-201ENST00000221922 PXT1Q8NFP0 134 aa19.61■□□□□ 0.73
CCDC9-201ENST00000221922 OR52N4Q8NGI2 321 aa19.61■□□□□ 0.73
CCDC9-201ENST00000221922 RHBDD1Q8TEB9 315 aa19.61■□□□□ 0.73
CCDC9-201ENST00000221922 NKD1Q969G9 470 aa19.61■□□□□ 0.73
CCDC9-201ENST00000221922 NUDT16L1Q9BRJ7 211 aaKnown RBP19.61■□□□□ 0.73
CCDC9-201ENST00000221922 DNTTIP1Q9H147 329 aa19.61■□□□□ 0.73
CCDC9-201ENST00000221922 SH2D2AQ9NP31 389 aa19.61■□□□□ 0.73
CCDC9-201ENST00000221922 TEX46H3BTG2 121 aa19.6■□□□□ 0.73
CCDC9-201ENST00000221922 ERCC1P07992 297 aaPredicted RBP19.6■□□□□ 0.73
CCDC9-201ENST00000221922 SP9P0CG40 484 aa19.6■□□□□ 0.73
CCDC9-201ENST00000221922 RAB3AP20336 220 aa19.6■□□□□ 0.73
CCDC9-201ENST00000221922 GSK3AP49840 483 aa19.6■□□□□ 0.73
CCDC9-201ENST00000221922 FAHD2BQ6P2I3 314 aaPredicted RBP19.6■□□□□ 0.73
CCDC9-201ENST00000221922 PAQR8Q8TEZ7 354 aa19.6■□□□□ 0.73
CCDC9-201ENST00000221922 MITD1Q8WV92 249 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms