RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 CDCA4Q9BXL8 241 aa17.06■□□□□ 0.32
SMPD3-201ENST00000219334 FAHP16930 419 aa17.06■□□□□ 0.32
SMPD3-201ENST00000219334 THBS4P35443 961 aa17.06■□□□□ 0.32
SMPD3-201ENST00000219334 ADIRFQ15847 76 aa17.06■□□□□ 0.32
SMPD3-201ENST00000219334 C2orf76Q3KRA6 126 aa17.06■□□□□ 0.32
SMPD3-201ENST00000219334 PRSS36Q5K4E3 855 aa17.06■□□□□ 0.32
SMPD3-201ENST00000219334 DRAXINQ8NBI3 349 aaPredicted RBP17.06■□□□□ 0.32
SMPD3-201ENST00000219334 KTI12Q96EK9 354 aaPredicted RBP17.06■□□□□ 0.32
SMPD3-201ENST00000219334 PATZ1Q9HBE1 687 aaKnown RBP17.06■□□□□ 0.32
SMPD3-201ENST00000219334 NCBP2LA6PVI3 153 aaKnown RBP17.06■□□□□ 0.32
SMPD3-201ENST00000219334 MGMTP16455 207 aa17.06■□□□□ 0.32
SMPD3-201ENST00000219334 S100A11P31949 105 aa17.06■□□□□ 0.32
SMPD3-201ENST00000219334 GPM6AP51674 278 aa17.06■□□□□ 0.32
SMPD3-201ENST00000219334 BPIFB3P59826 476 aa17.06■□□□□ 0.32
SMPD3-201ENST00000219334 PTOV1Q86YD1 416 aa17.06■□□□□ 0.32
SMPD3-201ENST00000219334 PP6455Q8WZ26 134 aa17.06■□□□□ 0.32
SMPD3-201ENST00000219334 CMTM3Q96MX0 182 aa17.06■□□□□ 0.32
SMPD3-201ENST00000219334 GPR87Q9BY21 358 aa17.06■□□□□ 0.32
SMPD3-201ENST00000219334 MN1Q10571 1320 aaPredicted RBP17.06■□□□□ 0.32
SMPD3-201ENST00000219334 SIX6O95475 246 aa17.06■□□□□ 0.32
SMPD3-201ENST00000219334 Q8IYB0 196 aa17.06■□□□□ 0.32
SMPD3-201ENST00000219334 OR2G2Q8NGZ5 317 aa17.06■□□□□ 0.32
SMPD3-201ENST00000219334 TRMT61AQ96FX7 289 aaKnown RBP17.06■□□□□ 0.32
SMPD3-201ENST00000219334 NUPL2O15504 423 aaKnown RBP17.05■□□□□ 0.32
SMPD3-201ENST00000219334 ATF1P18846 271 aa17.05■□□□□ 0.32
SMPD3-201ENST00000219334 GNG3P63215 75 aa17.05■□□□□ 0.32
SMPD3-201ENST00000219334 DBX2Q6ZNG2 339 aa17.05■□□□□ 0.32
SMPD3-201ENST00000219334 ZNF391Q9UJN7 358 aa17.05■□□□□ 0.32
SMPD3-201ENST00000219334 CCSO14618 274 aa17.05■□□□□ 0.32
SMPD3-201ENST00000219334 DTYMKP23919 212 aa17.05■□□□□ 0.32
SMPD3-201ENST00000219334 ZNF117Q03924 483 aa17.05■□□□□ 0.32
SMPD3-201ENST00000219334 TMEM268Q5VZI3 342 aa17.05■□□□□ 0.32
SMPD3-201ENST00000219334 TMEM215Q68D42 235 aa17.05■□□□□ 0.32
SMPD3-201ENST00000219334 RNF150Q9ULK6 438 aa17.05■□□□□ 0.32
SMPD3-201ENST00000219334 OSGIN2Q9Y236 505 aa17.05■□□□□ 0.32
SMPD3-201ENST00000219334 OR5H15A6NDH6 313 aa17.05■□□□□ 0.32
SMPD3-201ENST00000219334 OR5H14A6NHG9 310 aa17.05■□□□□ 0.32
SMPD3-201ENST00000219334 OR5H1A6NKK0 313 aa17.05■□□□□ 0.32
SMPD3-201ENST00000219334 HOXD12P35452 270 aa17.05■□□□□ 0.32
SMPD3-201ENST00000219334 CASP3P42574 277 aa17.05■□□□□ 0.32
SMPD3-201ENST00000219334 PAQR6Q6TCH4 344 aa17.05■□□□□ 0.32
SMPD3-201ENST00000219334 OR10AD1Q8NGE0 317 aa17.05■□□□□ 0.32
SMPD3-201ENST00000219334 IKZF5Q9H5V7 419 aa17.05■□□□□ 0.32
SMPD3-201ENST00000219334 BARX1Q9HBU1 254 aaPredicted RBP17.05■□□□□ 0.32
SMPD3-201ENST00000219334 GABRA1P14867 456 aa17.05■□□□□ 0.32
SMPD3-201ENST00000219334 TMEM41BQ5BJD5 291 aa17.05■□□□□ 0.32
SMPD3-201ENST00000219334 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.05■□□□□ 0.32
SMPD3-201ENST00000219334 NUDCD2Q8WVJ2 157 aa17.05■□□□□ 0.32
SMPD3-201ENST00000219334 YIPF5Q969M3 257 aa17.05■□□□□ 0.32
SMPD3-201ENST00000219334 STRAPQ9Y3F4 350 aaKnown RBP17.05■□□□□ 0.32
SMPD3-201ENST00000219334 PWWP2BQ6NUJ5 590 aa17.04■□□□□ 0.32
SMPD3-201ENST00000219334 OR13G1Q8NGZ3 307 aa17.04■□□□□ 0.32
SMPD3-201ENST00000219334 CT55Q8WUE5 264 aa17.04■□□□□ 0.32
SMPD3-201ENST00000219334 PELI1Q96FA3 418 aa17.04■□□□□ 0.32
SMPD3-201ENST00000219334 ADAM19Q9H013 955 aa17.04■□□□□ 0.32
SMPD3-201ENST00000219334 KNTC1P50748 2209 aa17.04■□□□□ 0.32
SMPD3-201ENST00000219334 TMEM30CPA0ZSE6 113 aa17.04■□□□□ 0.32
SMPD3-201ENST00000219334 VMA21Q3ZAQ7 101 aa17.04■□□□□ 0.32
SMPD3-201ENST00000219334 STAC2Q6ZMT1 411 aa17.04■□□□□ 0.32
SMPD3-201ENST00000219334 SLC7A6Q92536 515 aa17.04■□□□□ 0.32
SMPD3-201ENST00000219334 IGLV3-16A0A075B6K0 115 aa17.04■□□□□ 0.32
SMPD3-201ENST00000219334 IFITM5A6NNB3 132 aa17.04■□□□□ 0.32
SMPD3-201ENST00000219334 PEX11BO96011 259 aa17.04■□□□□ 0.32
SMPD3-201ENST00000219334 TMIGD3P0DMS9 266 aaPredicted RBP17.04■□□□□ 0.32
SMPD3-201ENST00000219334 PAX6P26367 422 aa17.04■□□□□ 0.32
SMPD3-201ENST00000219334 NPAP1Q9NZP6 1156 aa17.04■□□□□ 0.32
SMPD3-201ENST00000219334 ITGB4P16144 1822 aa17.04■□□□□ 0.32
SMPD3-201ENST00000219334 TERB2Q8NHR7 220 aa17.04■□□□□ 0.32
SMPD3-201ENST00000219334 GPX8Q8TED1 209 aa17.04■□□□□ 0.32
SMPD3-201ENST00000219334 TAF9BQ9HBM6 251 aa17.04■□□□□ 0.32
SMPD3-201ENST00000219334 MED9Q9NWA0 146 aa17.04■□□□□ 0.32
SMPD3-201ENST00000219334 PCYT1BQ9Y5K3 369 aaPredicted RBP17.04■□□□□ 0.32
SMPD3-201ENST00000219334 CD1EP15812 388 aa17.03■□□□□ 0.32
SMPD3-201ENST00000219334 SRD5A2P31213 254 aa17.03■□□□□ 0.32
SMPD3-201ENST00000219334 BMI1P35226 326 aa17.03■□□□□ 0.32
SMPD3-201ENST00000219334 NKG7Q16617 165 aa17.03■□□□□ 0.32
SMPD3-201ENST00000219334 LFNGQ8NES3 379 aa17.03■□□□□ 0.32
SMPD3-201ENST00000219334 HES4Q9HCC6 221 aa17.03■□□□□ 0.32
SMPD3-201ENST00000219334 DRD3P35462 400 aa17.03■□□□□ 0.32
SMPD3-201ENST00000219334 FZD5Q13467 585 aa17.03■□□□□ 0.32
SMPD3-201ENST00000219334 RHBDD2Q6NTF9 364 aa17.03■□□□□ 0.32
SMPD3-201ENST00000219334 MOB3AQ96BX8 217 aa17.03■□□□□ 0.32
SMPD3-201ENST00000219334 A0A1W2PR80 420 aa17.03■□□□□ 0.32
SMPD3-201ENST00000219334 DHODHQ02127 395 aa17.03■□□□□ 0.32
SMPD3-201ENST00000219334 BAGE3Q86Y29 109 aa17.03■□□□□ 0.32
SMPD3-201ENST00000219334 BAGE2Q86Y30 109 aa17.03■□□□□ 0.32
SMPD3-201ENST00000219334 OR13C5Q8NGS8 318 aa17.03■□□□□ 0.32
SMPD3-201ENST00000219334 OR10D3Q8NH80 312 aa17.03■□□□□ 0.32
SMPD3-201ENST00000219334 OR2A5Q96R48 311 aa17.03■□□□□ 0.32
SMPD3-201ENST00000219334 RAB1BQ9H0U4 201 aa17.03■□□□□ 0.32
SMPD3-201ENST00000219334 FSCN3Q9NQT6 498 aa17.03■□□□□ 0.32
SMPD3-201ENST00000219334 MT-ND4LP03901 98 aa17.03■□□□□ 0.32
SMPD3-201ENST00000219334 H2AFB1P0C5Y9 115 aa17.03■□□□□ 0.32
SMPD3-201ENST00000219334 DRAM2Q6UX65 266 aa17.03■□□□□ 0.32
SMPD3-201ENST00000219334 SKA3Q8IX90 412 aa17.03■□□□□ 0.32
SMPD3-201ENST00000219334 BPIFCQ8NFQ6 507 aa17.03■□□□□ 0.32
SMPD3-201ENST00000219334 KCNE3Q9Y6H6 103 aa17.03■□□□□ 0.32
SMPD3-201ENST00000219334 SPRY1O43609 319 aaPredicted RBP17.03■□□□□ 0.32
SMPD3-201ENST00000219334 CXorf67Q86X51 503 aaPredicted RBP17.03■□□□□ 0.32
SMPD3-201ENST00000219334 OR10R2Q8NGX6 335 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms