RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 A8MXK9 166 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 STMND1H3BQB6 276 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 DNASE2O00115 360 aaPredicted RBP13.39□□□□□ -0.27
EFNB1-201ENST00000204961 RRADP55042 308 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 GUSBP11Q6P575 273 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 SMRP1Q8NCR6 262 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 OR1M1Q8NGA1 313 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 OR10Z1Q8NGY1 313 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 PCDHB10Q9UN67 800 aa13.39□□□□□ -0.27
EFNB1-201ENST00000204961 A0A1B0GX78 115 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 E9PLN8 166 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 SERPINA5P05154 406 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 AMY2BP19961 511 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 ITGA3P26006 1051 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 CD27P26842 260 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 RFC3P40938 356 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 GPR85P60893 370 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 RBM39Q14498 530 aaKnown RBP13.38□□□□□ -0.27
EFNB1-201ENST00000204961 GUCA2BQ16661 112 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 PNLDC1Q8NA58 520 aaKnown RBP13.38□□□□□ -0.27
EFNB1-201ENST00000204961 HOXB13Q92826 284 aaPredicted RBP13.38□□□□□ -0.27
EFNB1-201ENST00000204961 USB1Q9BQ65 265 aaKnown RBP13.38□□□□□ -0.27
EFNB1-201ENST00000204961 ATPIF1Q9UII2 106 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 RIF1Q5UIP0 2472 aaKnown RBP13.38□□□□□ -0.27
EFNB1-201ENST00000204961 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 MSGN1A6NI15 193 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 ZNF98A6NK75 572 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 ZNF726A6NNF4 738 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 TNFSF12O43508 249 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 RAB3AP20336 220 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 NME2P22392 152 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 CCNOP22674 350 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 CEBPGP53567 150 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 CLDN6P56747 220 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 CSNK2A1P68400 391 aaPredicted RBP13.38□□□□□ -0.27
EFNB1-201ENST00000204961 OVCH2Q7RTZ1 564 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 PLXDC1Q8IUK5 500 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 CSNK2A3Q8NEV1 391 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 OR5M9Q8NGP3 310 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 UCN2Q96RP3 112 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 SLC2A4RGQ9NR83 387 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 CYB5R1Q9UHQ9 305 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 IGHV3-64DA0A0J9YX35 117 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 FAM230AA0A1W2PPH8 454 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 RFPL4AA6NLU0 287 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 OR6C76A6NM76 312 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 LMO7DNF2Z398 122 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 RFPL4AL1F8VTS6 287 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 OR2T1O43869 369 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 SCRG1O75711 98 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 PMS2P2O95744 297 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 FGF2P09038 288 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 CBR1P16152 277 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 ZNF43P17038 809 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 PDSS1Q5T2R2 415 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 TSPO2Q5TGU0 170 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 RAET1LQ5VY80 246 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 HAGHLQ6PII5 290 aaPredicted RBP13.38□□□□□ -0.27
EFNB1-201ENST00000204961 FAM180AQ6UWF9 173 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 UEVLDQ8IX04 471 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 OR4K17Q8NGC6 315 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 OR10S1Q8NGN2 331 aa13.38□□□□□ -0.27
EFNB1-201ENST00000204961 NKX6-2Q9C056 277 aaPredicted RBP13.38□□□□□ -0.27
EFNB1-201ENST00000204961 PIAS2O75928 621 aa13.37□□□□□ -0.27
EFNB1-201ENST00000204961 NKAIN1Q4KMZ8 207 aa13.37□□□□□ -0.27
EFNB1-201ENST00000204961 ZNF585AQ6P3V2 769 aa13.37□□□□□ -0.27
EFNB1-201ENST00000204961 ST7LQ8TDW4 575 aa13.37□□□□□ -0.27
EFNB1-201ENST00000204961 RAB3CQ96E17 227 aa13.37□□□□□ -0.27
EFNB1-201ENST00000204961 ZNF837Q96EG3 531 aaPredicted RBP13.37□□□□□ -0.27
EFNB1-201ENST00000204961 PGAM5Q96HS1 289 aa13.37□□□□□ -0.27
EFNB1-201ENST00000204961 WNT16Q9UBV4 365 aa13.37□□□□□ -0.27
EFNB1-201ENST00000204961 C9orf170A2RU37 121 aa13.37□□□□□ -0.27
EFNB1-201ENST00000204961 MTRF1O75570 445 aaKnown RBP13.37□□□□□ -0.27
EFNB1-201ENST00000204961 DXOO77932 396 aaKnown RBP13.37□□□□□ -0.27
EFNB1-201ENST00000204961 TXNDC12O95881 172 aa13.37□□□□□ -0.27
EFNB1-201ENST00000204961 BLVRBP30043 206 aaPredicted RBP13.37□□□□□ -0.27
EFNB1-201ENST00000204961 MICBQ29980 383 aa13.37□□□□□ -0.27
EFNB1-201ENST00000204961 PLEKHN1Q494U1 663 aaPredicted RBP13.37□□□□□ -0.27
EFNB1-201ENST00000204961 EMC4Q5J8M3 183 aa13.37□□□□□ -0.27
EFNB1-201ENST00000204961 GTPBP8Q8N3Z3 284 aaPredicted RBP13.37□□□□□ -0.27
EFNB1-201ENST00000204961 ASB17Q8WXJ9 295 aa13.37□□□□□ -0.27
EFNB1-201ENST00000204961 TMEM234Q8WY98 164 aa13.37□□□□□ -0.27
EFNB1-201ENST00000204961 ZC3H10Q96K80 434 aaKnown RBP13.37□□□□□ -0.27
EFNB1-201ENST00000204961 LRFN5Q96NI6 719 aa13.37□□□□□ -0.27
EFNB1-201ENST00000204961 PHB2Q99623 299 aa13.37□□□□□ -0.27
EFNB1-201ENST00000204961 C1orf198Q9H425 327 aa13.37□□□□□ -0.27
EFNB1-201ENST00000204961 ZNF275Q9NSD4 429 aaPredicted RBP13.37□□□□□ -0.27
EFNB1-201ENST00000204961 EHFQ9NZC4 300 aa13.37□□□□□ -0.27
EFNB1-201ENST00000204961 GPN3Q9UHW5 284 aaPredicted RBP13.37□□□□□ -0.27
EFNB1-201ENST00000204961 ZNF175Q9Y473 711 aa13.37□□□□□ -0.27
EFNB1-201ENST00000204961 OR14I1A6ND48 311 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 SULT2B1O00204 365 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 HSPB6O14558 160 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 SPRY1O43609 319 aaPredicted RBP13.36□□□□□ -0.27
EFNB1-201ENST00000204961 RAD51DO75771 328 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 LDOC1O95751 146 aaPredicted RBP13.36□□□□□ -0.27
EFNB1-201ENST00000204961 ITGB2P05107 769 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 CFIP05156 583 aa13.36□□□□□ -0.27
EFNB1-201ENST00000204961 RCC1P18754 421 aaPredicted RBP13.36□□□□□ -0.27
EFNB1-201ENST00000204961 GUCA1AP43080 201 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms