RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 PLCXD2Q0VAA5 305 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 TMEM244Q5VVB8 128 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 AWAT2Q6E213 333 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 ZNF813Q6ZN06 617 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 ZNF248Q8NDW4 579 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 BHLHE23Q8NDY6 225 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 OR4K15Q8NH41 348 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 ADAMTS18Q8TE60 1221 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 ZC3H10Q96K80 434 aaKnown RBP9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 TGM7Q96PF1 710 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 FN3KRPQ9HA64 309 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 PPP1R14DQ9NXH3 145 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 SLC2A8Q9NY64 477 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 ZNF107Q9UII5 783 aaPredicted RBP9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 PCDHGA1Q9Y5H4 931 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 FGF16O43320 207 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 DUS4LO95620 317 aaKnown RBP9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 SEMA4FO95754 770 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 MT-ATP6P00846 226 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 THEGLP0DJG4 465 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 VSIG8P0DPA2 414 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 LAP3P28838 519 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 DLX2Q07687 328 aaPredicted RBP9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 PHF19Q5T6S3 580 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 COL13A1Q5TAT6 717 aaPredicted RBP9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 PTCRAQ6ISU1 281 aaPredicted RBP9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 FOXRED2Q8IWF2 684 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 NKAIN3Q8N8D7 197 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 ZSCAN4Q8NAM6 433 aaPredicted RBP9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 OR4A4PQ8NGN8 299 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 RXFP4Q8TDU9 374 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 CYYR1Q96J86 154 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 NICN1Q9BSH3 213 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 FOXQ1Q9C009 403 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 BLACEA4D250 179 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 C2orf72A6NCS6 295 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 FRG2CA6NGY1 282 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 MSGN1A6NI15 193 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 H0YIZ8 118 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 PLPP3O14495 311 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 AGPAT2O15120 278 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 SYT7O43581 403 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 CTHP32929 405 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 RABIFP47224 123 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 GFERP55789 205 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 COMMD2Q86X83 199 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 ANGPTL5Q86XS5 388 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 RNASE11Q8TAA1 199 aaKnown RBP9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 ADAT3Q96EY9 351 aaPredicted RBP9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 TMEM41AQ96HV5 264 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 RNF126Q9BV68 326 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 FBRSQ9HAH7 460 aa9.37□□□□□ -0.91
CX3CL1-201ENST00000006053 IGKV1D-43A0A0B4J1Z2 117 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 OR2T1O43869 369 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 H2AFB1P0C5Y9 115 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 COX5BP10606 129 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 RAB6AP20340 208 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 EIF2S3P41091 472 aaKnown RBP9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 EMP2P54851 167 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 PDZK1IP1Q13113 114 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 EIF2S3LQ2VIR3 472 aaKnown RBP9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 DMRTC1Q5HYR2 192 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 RNF144BQ7Z419 303 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 TCTN2Q96GX1 697 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 MED29Q9NX70 200 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 TEX13DA0A0J9YY54 714 aaPredicted RBP9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 A8MVM7 634 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 NPIPA5E9PKD4 350 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 H0YIG0 161 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 SLC31A2O15432 143 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 SRSF10O75494 262 aaKnown RBP9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 DXOO77932 396 aaKnown RBP9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 MPIG6BO95866 241 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 POLR2HP52434 150 aaKnown RBP9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 SLC26A5P58743 744 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 SPCS3P61009 180 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 FABP9Q0Z7S8 132 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 STOML3Q8TAV4 291 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 ADIPOR1Q96A54 375 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 UQCC1Q9NVA1 299 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 GSKIPQ9P0R6 139 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 NPIPA1Q9UND3 350 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 LOC390937A0A1W2PQ73 354 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 C1orf196B1AJZ1 125 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 TCAPO15273 167 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 CD79AP11912 226 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 FZD2Q14332 565 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 RNF212Q495C1 297 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 DHRS7BQ6IAN0 325 aaPredicted RBP9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 KLHL24Q6TFL4 600 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 SLC22A24Q8N4F4 322 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 SLC30A7Q8NEW0 376 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 SLC26A10Q8NG04 563 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 EMC6Q9BV81 110 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 BANF2Q9H503 90 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 METTL8Q9H825 291 aaKnown RBP9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 CYTL1Q9NRR1 136 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 OR5AC2Q9NZP5 309 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 PIAS3Q9Y6X2 628 aa9.36□□□□□ -0.91
CX3CL1-201ENST00000006053 IGHV5-51A0A0C4DH38 117 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms