RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Ntng2Q8R4F1 589 aaKnown RBP12.78□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Ttc36Q8VBW8 186 aa12.78□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Efcab7Q8VDY4 628 aa12.78□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Calhm2Q8VEC4 323 aa12.78□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Olfr1143Q8VEU8 314 aa12.78□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Olfr820Q8VFU5 312 aa12.78□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Olfr1497Q8VG11 314 aa12.78□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Nudt16l1Q8VHN8 211 aaKnown RBP12.78□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Commd4Q9CQ02 199 aa12.78□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Hcfc1r1Q9CYQ5 120 aa12.78□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Derl3Q9D8K3 228 aa12.78□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Mrpl39Q9JKF7 336 aa12.78□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Phf1Q9Z1B8 559 aa12.78□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Abhd16aQ9Z1Q2 558 aa12.78□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Trip12G5E870 2025 aaKnown RBP12.78□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Ighv1-78A0A0G2JGN3 117 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Klhl15A2AAX3 604 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Dcaf10A2AKB9 566 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Olfr1224-ps1A3KGY4 311 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Zfp229E9PWT2 705 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Vmn1r91E9PZR7 307 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 C2cd4dP0CG09 341 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 VtnP29788 478 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Drd3P30728 446 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Fkbp2P45878 140 aaKnown RBP12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Rpl27P61358 136 aaKnown RBP12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Klhdc2Q4G5Y1 406 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Fbxw20Q5U467 468 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Olfr145Q60882 310 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Prm3Q62100 101 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Adh7Q64437 374 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 ToxQ66JW3 526 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Cpeb3Q7TN99 716 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Olfr304Q7TS03 333 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Q80UB0 333 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Spata2lQ8BNN1 426 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Cdcp2Q8BQH6 427 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Foxj3Q8BUR3 623 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Xkr8Q8C0T0 401 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Cmtm4Q8CJ61 208 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Plpp7Q91WB2 271 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Nop16Q9CPT5 178 aaKnown RBP12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 MmabQ9D273 237 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Mgat4cQ9D306 478 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Vstm2bQ9JME9 285 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Avpr1bQ9WU02 421 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Asah1Q9WV54 394 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Gm17087V9GXQ2 156 aa12.77□□□□□ -0.36
Ssr1-204ENSMUST00000225319 Ighv1-13A0A075B5I0 98 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Gm42517A0A1Y7VLQ2 374 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Olfr1511E9PWU0 318 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Olfr1510E9PZZ6 318 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Olfr550E9Q544 316 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Vmn1r152E9Q9N3 307 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Vmn1r104L7N293 307 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Lin7bO88951 207 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 P01852 173 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Tgif1P70284 272 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Tmprss11bQ14C59 416 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Scand1Q2M4I6 142 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Rbm38Q62176 237 aaKnown RBP12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Psmf1Q8BHL8 271 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Fam120cQ8C3F2 1091 aaKnown RBP12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Elfn1Q8C8T7 828 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Zdhhc1Q8R0N9 484 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Vmn1r23Q8R2D0 302 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Olfr518Q8VEW1 333 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 D6Wsu163eQ91YN0 552 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 MrgprdQ91ZB8 321 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 GpnmbQ99P91 574 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Mrps28Q9CY16 186 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 MeiobQ9D513 470 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Rtl8cQ9D6I0 112 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Cldnd2Q9D9H2 167 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 RangrfQ9JIB0 185 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Pard6gQ9JK84 382 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Ndrg3Q9QYF9 375 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Fbxo15Q9QZN0 433 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Znf346Q9R0B7 294 aa12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 RbpmsQ9WVB0 197 aaKnown RBP12.77□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Prune2Q52KR3 3084 aa12.76□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Bod1lE9Q6J5 3032 aa12.76□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Ggta1l1A2AUQ7 319 aa12.76□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Olfr115B2RTB9 312 aa12.76□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Olfr547E9PXN3 311 aa12.76□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Gm9493F6SVV1 192 aaKnown RBP12.76□□□□□ -0.37
Ssr1-204ENSMUST00000225319 4933403O08RikF6UK53 379 aa12.76□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Olfr1425K7N659 312 aa12.76□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Vmn2r29L7N2D4 852 aa12.76□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Ogg1O08760 345 aa12.76□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Hps1O08983 704 aa12.76□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Pcdh12O55134 1180 aa12.76□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Ifi204P0DOV2 619 aa12.76□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Spi1P17433 272 aa12.76□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Slc6a1P31648 599 aa12.76□□□□□ -0.37
Ssr1-204ENSMUST00000225319 S1pr2P52592 352 aa12.76□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Hes5P70120 167 aa12.76□□□□□ -0.37
Ssr1-204ENSMUST00000225319 G6pd2P97324 513 aa12.76□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Shisa3Q3UPR0 238 aa12.76□□□□□ -0.37
Ssr1-204ENSMUST00000225319 Lefty1Q64280 368 aa12.76□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 46.2 ms