RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Lrp12Q8BUJ9 858 aa18.73■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Pla2g3Q8BZT7 504 aa18.73■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Olfr434Q8VF17 321 aa18.73■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Olfr47Q8VF18 321 aa18.73■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Hrh4Q91ZY2 391 aa18.73■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Yif1bQ9CX30 311 aa18.73■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Coq5Q9CXI0 327 aa18.73■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Rpl22l1Q9D7S7 122 aaKnown RBP18.73■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Ceacam13Q9DAT7 263 aa18.73■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Mcts1Q9DB27 181 aa18.73■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 DhdhQ9DBB8 333 aa18.73■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 SrrQ9QZX7 339 aa18.73■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Gm39566A0A1B0GT45 1251 aa18.72■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Gm10358A0A1D5RLD8 333 aa18.72■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Ifit3bE9PV48 403 aa18.72■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Gm20683H3BKJ1 410 aa18.72■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Pgam2O70250 253 aa18.72■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Chst3O88199 472 aa18.72■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 NgfP01139 241 aa18.72■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 GapdhP16858 333 aaKnown RBP18.72■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Cd48P18181 240 aa18.72■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Rps11P62281 158 aaKnown RBP18.72■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Olfr90Q0VEL5 310 aa18.72■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Olfr988Q7TRA1 309 aa18.72■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Olfr374Q7TRY0 313 aa18.72■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Negr1Q80Z24 348 aa18.72■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Arhgap22Q8BL80 702 aa18.72■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Gm17324Q8C6J8 137 aa18.72■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Cnppd1Q8K158 407 aa18.72■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Vmn1r32Q8R2D9 302 aa18.72■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Olfr1254Q8VFB1 314 aa18.72■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Olfr1487Q8VFQ6 315 aa18.72■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Prss28Q924N9 274 aa18.72■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 D10Wsu102eQ9CX66 185 aa18.72■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 BvesQ9ES83 358 aa18.72■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Gm3839S4R1W1 333 aa18.72■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Dcaf4A0A1Y7VNZ0 532 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Samt3A2ARK7 233 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Vmn1r34G3XA52 309 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Bcap29Q61334 240 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Bend6Q6PFX2 281 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Ptbp3Q8BHD7 523 aaKnown RBP18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Steap2Q8BWB6 489 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Plekhn1Q8C886 359 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Henmt1Q8CAE2 395 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Slc6a8Q8VBW1 640 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Ccdc92Q8VDN4 314 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Olfr164Q8VF87 315 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Olfr497Q8VG08 314 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Gbgt1Q8VI38 347 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Mettl18Q9CZ09 362 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Raet1eQ9CZQ6 251 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Hmg20aQ9DC33 346 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Vmn1r56Q9EPS9 310 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Adh4Q9QYY9 377 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Lmx1bO88609 395 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Sc5dO88822 299 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 PlatP11214 559 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Lyl1P27792 278 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Rfx3P48381 749 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Arhgap9Q1HDU4 648 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Znf354aQ61751 572 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Olfr429Q7TRW1 312 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Coro2bQ8BH44 480 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Pars2Q8CFI5 475 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Cml2Q8CHQ9 238 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Gpx6Q91WR8 221 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Dctn2Q99KJ8 402 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 PccbQ99MN9 541 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Cryba2Q9JJV1 197 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 Gabrg1Q9R0Y8 465 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 CcniQ9Z2V9 377 aa18.71■□□□□ 0.59
Ccdc88a-202ENSMUST00000109477 A4gntQ14BT6 341 aa18.7■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Olfr524Q7TRU0 318 aa18.7■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Fam98bQ80VD1 429 aaKnown RBP18.7■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Gadl1Q80WP8 550 aa18.7■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Stk35Q80ZW0 539 aa18.7■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Dlgap2Q8BJ42 1059 aa18.7■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Klhl12Q8BZM0 568 aa18.7■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Olfr308Q8VFP2 308 aa18.7■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Q91WE4 72 aa18.7■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 4930412O13RikQ9D5M9 106 aa18.7■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Serpinb7Q9D695 380 aa18.7■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Tceal6Q9DB24 200 aa18.7■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Rarres2Q9DD06 162 aa18.7■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Fam89bQ9QUI1 189 aa18.7■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Gm364A2AFI6 671 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 MsmpB1AWI6 139 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 CrnnD3YUU6 520 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Vmn1r13G5E8I3 300 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Gm5225J3QPL3 108 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Dpm1O70152 260 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Atxn2O70305 1285 aaKnown RBP18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Tcstv3O70518 169 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 SparcP07214 302 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Tgtp2Q3T9E4 415 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Tgtp1Q62293 415 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Ticam1Q80UF7 732 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Olfr70Q80ZX9 316 aa18.69■□□□□ 0.58
Ccdc88a-202ENSMUST00000109477 Zfp747Q8BHM7 422 aa18.69■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 40.1 ms