RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Foxj3Q8BUR3 623 aa9.4□□□□□ -0.9
Lig4-201ENSMUST00000095476 Zfp874aQ8BX23 447 aa9.4□□□□□ -0.9
Lig4-201ENSMUST00000095476 ApehQ8R146 732 aa9.4□□□□□ -0.9
Lig4-201ENSMUST00000095476 Olfr641Q8VGX6 312 aa9.4□□□□□ -0.9
Lig4-201ENSMUST00000095476 Sucnr1Q99MT6 317 aa9.4□□□□□ -0.9
Lig4-201ENSMUST00000095476 Mrm2Q9CPY0 246 aa9.4□□□□□ -0.9
Lig4-201ENSMUST00000095476 Lmntd1Q9D4C1 413 aa9.4□□□□□ -0.9
Lig4-201ENSMUST00000095476 Olfr632Q9EPN9 317 aa9.4□□□□□ -0.9
Lig4-201ENSMUST00000095476 Scamp2Q9ERN0 329 aa9.4□□□□□ -0.9
Lig4-201ENSMUST00000095476 Phf1Q9Z1B8 559 aa9.4□□□□□ -0.9
Lig4-201ENSMUST00000095476 Vmn1r5B2RQT2 315 aa9.4□□□□□ -0.91
Lig4-201ENSMUST00000095476 Vmn1r176G3UW31 304 aa9.4□□□□□ -0.91
Lig4-201ENSMUST00000095476 Socs1O35716 212 aa9.4□□□□□ -0.91
Lig4-201ENSMUST00000095476 Psmb5O55234 264 aa9.4□□□□□ -0.91
Lig4-201ENSMUST00000095476 P01664 111 aa9.4□□□□□ -0.91
Lig4-201ENSMUST00000095476 DaoP18894 345 aa9.4□□□□□ -0.91
Lig4-201ENSMUST00000095476 B3gat2P59270 324 aa9.4□□□□□ -0.91
Lig4-201ENSMUST00000095476 Trp53rkaQ5U452 244 aa9.4□□□□□ -0.91
Lig4-201ENSMUST00000095476 Olfr1386Q7TQT0 309 aa9.4□□□□□ -0.91
Lig4-201ENSMUST00000095476 Tmem202Q80W35 275 aa9.4□□□□□ -0.91
Lig4-201ENSMUST00000095476 Q80W69 301 aa9.4□□□□□ -0.91
Lig4-201ENSMUST00000095476 Fem1abQ8C0T1 654 aa9.4□□□□□ -0.91
Lig4-201ENSMUST00000095476 Olfr96Q8VFE3 313 aa9.4□□□□□ -0.91
Lig4-201ENSMUST00000095476 Olfr46Q8VGJ4 318 aa9.4□□□□□ -0.91
Lig4-201ENSMUST00000095476 Tp53rkQ99PW4 244 aa9.4□□□□□ -0.91
Lig4-201ENSMUST00000095476 Rab5aQ9CQD1 215 aa9.4□□□□□ -0.91
Lig4-201ENSMUST00000095476 Pex14Q9R0A0 376 aa9.4□□□□□ -0.91
Lig4-201ENSMUST00000095476 Mbd4Q9Z2D7 554 aa9.4□□□□□ -0.91
Lig4-201ENSMUST00000095476 Fem1aaQ9Z2G1 654 aa9.4□□□□□ -0.91
Lig4-201ENSMUST00000095476 MfngO09008 321 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Mtco2P00405 227 aaKnown RBP9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Tcfl5Q32NY8 489 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Slc17a1Q61983 465 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Heatr6Q6P1G0 1184 aaKnown RBP9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Defb19Q8K3I8 83 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Swsap1Q8VCI7 278 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Dusp18Q8VE01 188 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Olfr446Q8VEV0 308 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Olfr1241Q8VF91 314 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Cmtm8Q9CZR4 173 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Sec13Q9D1M0 322 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Ceacam13Q9DAT7 263 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Exo1Q9QZ11 837 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Gm15737D3YZR0 106 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Olfr872E9PVW2 323 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 BC049352E9Q2Z6 85 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Nid1P10493 1245 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Hsd3b2P26149 373 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Uck1P52623 277 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 CtdsplP58465 276 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Kcnj3P63250 501 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Olfr733Q14AK5 308 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Rbm38Q62176 237 aaKnown RBP9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Tmem130Q6NXM3 419 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Olfr205Q7TS37 305 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Cpt1cQ8BGD5 798 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Znf2Q8BIQ3 427 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Ssxb2Q8C5Z3 165 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Scgb2b27Q8R1E9 112 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Olfr584Q8VGW0 319 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Mrgpra7Q91ZC5 305 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Dram2Q9CR48 267 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 2610524H06RikQ9CZU9 139 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Pex13Q9D0K1 405 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 NmuQ9QXK8 174 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Siglec1Q62230 1695 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Olfr587-ps1A0A1B0GSS1 159 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Vmn1r180B9EK86 305 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Olfr1513L7N457 313 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 DffbO54788 344 aaKnown RBP9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Apobec1P51908 229 aaKnown RBP9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Mettl7a2Q5I0W6 244 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Sec14l3Q5SQ27 401 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Elavl3Q60900 367 aaKnown RBP9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Olfr43Q7TRX1 313 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Olfr403Q7TRX2 313 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Olfr198Q7TS40 306 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 9130023H24RikQ8BG98 337 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Zfpm2Q8CCH7 1151 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Rep15Q9D7T1 230 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Cpn1Q9JJN5 457 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Hapln1Q9QUP5 356 aaKnown RBP9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Rnf165E9QAU8 347 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Gm21818J3KMS6 170 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Gm8660K7N6J2 305 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Olfr224M9MMJ7 314 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 AF067061O70616 171 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Adrb2P18762 418 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 MgmtP26187 211 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 NodalP43021 354 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 ShhQ62226 437 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Tmem106cQ80VP8 260 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Tns4Q8BZ33 696 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Vash1Q8C1W1 375 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Fahd1Q8R0F8 227 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Olfr472Q8VG43 310 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Olfr1240Q8VG73 314 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 MeiobQ9D513 470 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Prl8a1Q9DAV8 240 aa9.39□□□□□ -0.91
Lig4-201ENSMUST00000095476 Olfr937Q9EQB4 311 aa9.39□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 45.1 ms