RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Olfr920E9Q413 310 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Vmn1r169L7N275 304 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Cd79bP15530 228 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Smim4Q8C1Q6 80 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Fbxl22Q8C7B6 236 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Vmn1r83Q8R287 306 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Letmd1Q924L1 360 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Olfr373E9Q4J3 314 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Tacr1P30548 407 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 S100a3P62818 101 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Sh3bp2Q06649 559 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Olfr372Q7TRY2 314 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Duoxa1Q8VE49 341 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Olfr1491Q8VEZ5 319 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Olfr551Q8VG23 315 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Mnx1Q9QZW9 404 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Thbs4Q9Z1T2 963 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Barhl1P63157 327 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Rack1P68040 317 aaKnown RBP12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Nufip2Q5F2E7 692 aaKnown RBP12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Olfr366Q7TRY4 309 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 SccpdhQ8R127 429 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Calhm2Q8VEC4 323 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Olfr1424Q8VFV1 313 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Olfr887Q9EQA6 309 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Tcstv3O70518 169 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Rplp1P47955 114 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 ShhQ62226 437 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Nudt9Q8BVU5 350 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Olfr486Q8VFD0 314 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 PecrQ99MZ7 303 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Gm15140A2BEE3 237 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Agr2O88312 175 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Slc11a1P41251 548 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Sox9Q04887 507 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Slc47a2Q3V050 573 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Olfr881Q8VF63 314 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Prl5a1Q9JII2 230 aa12.87□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Hpse2B2RY83 592 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Zfp988F6VKC7 633 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 PtgdsO09114 189 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Lhx8O35652 367 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Dnmt3bO88509 859 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Rpl18P35980 188 aaKnown RBP12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Rims4P60191 269 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Tmprss9P69525 1065 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Olfr1111Q7TR55 312 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Tnfsfm13Q8BXS2 410 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Hmgcll1Q8JZS7 343 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Olfr206Q8VGP9 306 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Fam3cQ91VU0 227 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Ube2tQ9CQ37 204 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Ambra1A2AH22 1300 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Cfap77A0A087WRI3 283 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Fbxw28E9Q8A4 466 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Fignl2J3QK54 644 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Gnb1P62874 340 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Mmp25Q3U435 615 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Mettl7a2Q5I0W6 244 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Slc34a1Q60825 637 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Eddm3bQ8K0E4 149 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Olfr38Q8VGP4 317 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Dppa2Q9CWH0 301 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Tomm34Q9CYG7 309 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Dusp3Q9D7X3 185 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Enpp5Q9EQG7 477 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Cbll1Q9JIY2 491 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Cacna1bO55017 2327 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Gm4565A0A140LJ87 301 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Gm6176J3QK59 301 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Sftpa1P35242 248 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Hist1h3aP68433 136 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Q0VG62 139 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Gm4567Q3UTA8 301 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 PhyhipQ8K0S0 330 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Zfp958Q99LG7 467 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Ms4a6dQ99N07 247 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Mmp1bQ9EPL6 463 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Ubl3Q9Z2M6 117 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Zfp979A2A799 407 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Ccl26F8VQM2 93 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 H2-M10.6Q85ZW5 330 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Uqcc3Q8K2T4 89 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Olfr460Q8VF31 314 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Olfr669Q8VGU9 317 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Olfr572Q8VGZ3 318 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Gjc3Q921C1 269 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Senp8Q9D2Z4 221 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Tmem8aQ9ESN3 769 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Vmn1r88E9Q235 316 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Esp3J3QN49 87 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Hax1O35387 280 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Slc6a9P28571 692 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Dcaf7P61963 342 aaKnown RBP12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Trib1Q8K4K4 372 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Cys1Q8R4T1 145 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 Egln1Q91YE3 400 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 ManfQ9CXI5 179 aaKnown RBP12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 TrilQ9DBY4 809 aa12.86□□□□□ -0.35
Col5a1-201ENSMUST00000028280 MNCb-2990Q9JJ93 142 aa12.86□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 38.9 ms