RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Ackr4Q924I3 350 aa14.63□□□□□ -0.07
Trim28-201ENSMUST00000005705 1810009J06RikQ9CPN7 247 aa14.63□□□□□ -0.07
Trim28-201ENSMUST00000005705 Tmem216Q9CQC4 141 aa14.63□□□□□ -0.07
Trim28-201ENSMUST00000005705 1700013G24RikQ9DAC6 286 aa14.63□□□□□ -0.07
Trim28-201ENSMUST00000005705 Sdf2Q9DCT5 211 aa14.63□□□□□ -0.07
Trim28-201ENSMUST00000005705 Sult1b1Q9QWG7 299 aa14.63□□□□□ -0.07
Trim28-201ENSMUST00000005705 Muc5acE9QAQ8 3455 aa14.63□□□□□ -0.07
Trim28-201ENSMUST00000005705 A0A286YDP4 300 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Fam90a1aA2A4E2 429 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gm3727J3QM54 205 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Vmn2r32K7N686 852 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Vmn2r42O35192 852 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gabrg2P22723 474 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 CtgfP29268 348 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Agtr1bP29755 359 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Pax2P32114 414 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Sox18P43680 377 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Nos3P70313 1202 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Acsf3Q3URE1 583 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Dhrs9Q58NB6 319 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Akt2Q60823 481 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Doxl2Q6IMK7 723 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Ddhd2Q80Y98 699 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Cbln2Q8BGU2 224 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Ankrd34cQ8BLB8 534 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Fam180aQ8BR21 173 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 QdprQ8BVI4 241 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Rcc1Q8VE37 421 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Olfr1378Q8VGH0 315 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 TardbpQ921F2 414 aaKnown RBP14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Pink1Q99MQ3 580 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Mid1ip1Q9CQ20 182 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Slco1a1Q9QXZ6 670 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Plek2Q9WV52 353 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Cacna1aP97445 2368 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Galr2O88854 371 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Ube2iP63280 158 aaKnown RBP14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Dlx4P70436 240 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Agbl5Q09M02 886 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Trim63Q38HM4 350 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Alg11Q3TZM9 492 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Psg26Q4KL65 475 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Slc39a12Q5FWH7 689 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Abhd16bQ80YU0 474 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Crtac1Q8R555 646 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Slc48a1Q9D8M3 146 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Clec3aQ9EPW4 196 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gm20696H3BJN7 74 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gm21761J3QK00 171 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Vmn2r28L7N203 852 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Ier2P17950 221 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Il2rgP34902 369 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Ackr3P56485 362 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Map2k6P70236 334 aaKnown RBP14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Klri2Q5DT36 248 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Lpar4Q8BLG2 370 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Ldlrad4Q8BWJ4 306 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Neurl3Q8CJC5 254 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 SdhaQ8K2B3 664 aaKnown RBP14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Tceal3Q8R0A5 200 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Ubac2Q8R1K1 345 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Slc19a3Q99PL8 488 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Mtif3Q9CZD5 276 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Med29Q9DB91 199 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Fzd5Q9EQD0 585 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Il18bpQ9Z0M9 193 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gm17087V9GXQ2 156 aa14.62□□□□□ -0.07
Trim28-201ENSMUST00000005705 Igkv6-20A0A140T8P2 115 aa14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 Dpy19l1A6X919 746 aa14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 Vmn1r88E9Q235 316 aa14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 Nr1h5E9Q5A6 505 aa14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 Psmd4O35226 376 aaKnown RBP14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 Elavl1P70372 326 aaKnown RBP14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 Atf7ip2Q3UL97 452 aa14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 Guk1Q64520 198 aa14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 Impad1Q80V26 356 aa14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 Pqlc2Q8C4N4 293 aa14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 CmblQ8R1G2 245 aa14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 Hebp2Q9WU63 205 aa14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 PrnA0A075B668 197 aa14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gm29797A0A140LIA7 188 aa14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gm13102A2ASJ3 519 aa14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 Usp36B1AQJ2 1098 aaKnown RBP14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gm21411J3KMS0 136 aa14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gm3685J3QPP2 205 aa14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 Ggta1P23336 394 aa14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 Tnfsf9P41274 309 aa14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 Slc30a2Q2HJ10 371 aa14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 Slc25a33Q3TZX3 320 aa14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 Eif4e1bQ3UTA9 244 aa14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 Fam220aQ3ZN08 260 aa14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 NarflQ7TMW6 476 aa14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 Rtp2Q80ZI2 223 aa14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 Cpt1cQ8BGD5 798 aa14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 PpifQ99KR7 206 aaKnown RBP14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 Cnih4Q9CX13 139 aa14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 Prl8a1Q9DAV8 240 aa14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 Stard5Q9EPQ7 213 aa14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 PrndQ9QUG3 179 aa14.61□□□□□ -0.07
Trim28-201ENSMUST00000005705 Gm2022A0A1Y7VLT7 144 aa14.6□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 43.3 ms