RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Abhd13Q80UX8 337 aa14.77□□□□□ -0.04
Shh-201ENSMUST00000002708 QdprQ8BVI4 241 aa14.77□□□□□ -0.04
Shh-201ENSMUST00000002708 Slc25a28Q8R0Z5 364 aa14.77□□□□□ -0.04
Shh-201ENSMUST00000002708 BphlQ8R164 291 aa14.77□□□□□ -0.04
Shh-201ENSMUST00000002708 GcaQ8VC88 220 aa14.77□□□□□ -0.04
Shh-201ENSMUST00000002708 Mtif3Q9CZD5 276 aa14.77□□□□□ -0.04
Shh-201ENSMUST00000002708 Ppa1Q9D819 289 aa14.77□□□□□ -0.04
Shh-201ENSMUST00000002708 Sdf2Q9DCT5 211 aa14.77□□□□□ -0.04
Shh-201ENSMUST00000002708 Ldb3Q9JKS4 723 aaKnown RBP14.77□□□□□ -0.04
Shh-201ENSMUST00000002708 Tmsb15aA2AEH9 79 aa14.77□□□□□ -0.05
Shh-201ENSMUST00000002708 Gm5519D3Z175 170 aa14.77□□□□□ -0.05
Shh-201ENSMUST00000002708 Fam170bE9PXT9 378 aa14.77□□□□□ -0.05
Shh-201ENSMUST00000002708 Gm20390E9PZF0 267 aa14.77□□□□□ -0.05
Shh-201ENSMUST00000002708 P01808 119 aa14.77□□□□□ -0.05
Shh-201ENSMUST00000002708 Serpinf1P97298 417 aa14.77□□□□□ -0.05
Shh-201ENSMUST00000002708 Nme2Q01768 152 aa14.77□□□□□ -0.05
Shh-201ENSMUST00000002708 F830045P16RikQ8BJ95 487 aa14.77□□□□□ -0.05
Shh-201ENSMUST00000002708 Vmn1r208Q8R275 308 aa14.77□□□□□ -0.05
Shh-201ENSMUST00000002708 Acy3Q91XE4 318 aa14.77□□□□□ -0.05
Shh-201ENSMUST00000002708 Stard10Q9JMD3 291 aa14.77□□□□□ -0.05
Shh-201ENSMUST00000002708 Gm7173A0A0G2JEB6 3132 aa14.76□□□□□ -0.05
Shh-201ENSMUST00000002708 Vmn1r82A0A087WRV1 305 aa14.76□□□□□ -0.05
Shh-201ENSMUST00000002708 Mettl7a3G3X9G9 244 aa14.76□□□□□ -0.05
Shh-201ENSMUST00000002708 Bcl2l11O54918 196 aa14.76□□□□□ -0.05
Shh-201ENSMUST00000002708 Myf5P24699 255 aa14.76□□□□□ -0.05
Shh-201ENSMUST00000002708 RoraP51448 523 aa14.76□□□□□ -0.05
Shh-201ENSMUST00000002708 Trim69Q80X56 500 aa14.76□□□□□ -0.05
Shh-201ENSMUST00000002708 Hbq1aQ8BYM1 145 aa14.76□□□□□ -0.05
Shh-201ENSMUST00000002708 Hist1h2akQ8CGP7 130 aa14.76□□□□□ -0.05
Shh-201ENSMUST00000002708 Mic13Q8R404 119 aaKnown RBP14.76□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr131Q8VGC8 314 aa14.76□□□□□ -0.05
Shh-201ENSMUST00000002708 Glipr2Q9CYL5 154 aa14.76□□□□□ -0.05
Shh-201ENSMUST00000002708 Fam219aQ9D772 157 aa14.76□□□□□ -0.05
Shh-201ENSMUST00000002708 Lin37Q9D8N6 246 aa14.76□□□□□ -0.05
Shh-201ENSMUST00000002708 Sema7aQ9QUR8 664 aa14.76□□□□□ -0.05
Shh-201ENSMUST00000002708 Heatr5aQ5PRF0 2038 aa14.76□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr911-ps1A0A140T8K0 311 aa14.76□□□□□ -0.05
Shh-201ENSMUST00000002708 Gm16434J3QN10 205 aa14.76□□□□□ -0.05
Shh-201ENSMUST00000002708 Syt3O35681 587 aa14.76□□□□□ -0.05
Shh-201ENSMUST00000002708 Ccr6O54689 367 aa14.76□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr1136Q0VBI4 310 aa14.76□□□□□ -0.05
Shh-201ENSMUST00000002708 LipnQ3U4B4 400 aa14.76□□□□□ -0.05
Shh-201ENSMUST00000002708 Phf21aQ6ZPK0 659 aa14.76□□□□□ -0.05
Shh-201ENSMUST00000002708 Hs3st3a1Q8BKN6 393 aa14.76□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr862Q8VFJ1 306 aa14.76□□□□□ -0.05
Shh-201ENSMUST00000002708 Dmbx1Q91ZK4 381 aa14.76□□□□□ -0.05
Shh-201ENSMUST00000002708 Cryzl1Q921W4 348 aa14.76□□□□□ -0.05
Shh-201ENSMUST00000002708 Gm5788A0A1Y7VK80 144 aa14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 BC035044E0CXF8 138 aa14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 Vmn1r94K7N6X3 305 aa14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 Sp100O35892 482 aa14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 GipP48756 144 aa14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 FapP97321 761 aa14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 Plpp5Q3UMZ3 260 aa14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 Zfp235Q499D5 702 aa14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 Gm527Q4KL13 310 aa14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 Zfp748Q7TPL6 888 aa14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr1225Q7TR01 311 aa14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr285Q7TS17 319 aa14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 Gpat4Q8K2C8 456 aa14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr584Q8VGW0 319 aa14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 Adipor1Q91VH1 375 aa14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 Flvcr2Q91X85 551 aa14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 TardbpQ921F2 414 aaKnown RBP14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 Tmem25Q9DCF1 365 aa14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 Fbxl6Q9QXW0 535 aa14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 Insl6Q9QY05 191 aa14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 Cldn13Q9Z0S4 211 aa14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 Gm21411J3KMS0 136 aa14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 Sox1P53783 391 aa14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 Hrh3P58406 445 aa14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 Galk2Q68FH4 458 aa14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 GcsamQ6RFH4 181 aa14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr1126Q7TR49 314 aa14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr1388Q8VFA3 311 aa14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 VcanQ62059 3357 aa14.75□□□□□ -0.05
Shh-201ENSMUST00000002708 Gm28897A0A087WP44 222 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Gm15821A6X8J8 139 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr1218L7MU54 311 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Mtnd4lP03903 98 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Zfp11P10751 647 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Mmp9P41245 730 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Nrsn1P97799 196 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Fbxw22Q5XG67 466 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr884Q7TRE1 309 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Cggbp1Q8BHG9 167 aaKnown RBP14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Cacul1Q8R0X2 377 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Pttg1ipQ8R143 174 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Olfr539Q8VGL9 319 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Fam96bQ9D187 163 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Phospho2Q9D9M5 241 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Ceacam13Q9DAT7 263 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Kcne4Q9WTW3 170 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Col4a4Q9QZR9 1682 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Gm2022A0A1Y7VLT7 144 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Pusl1A2ADA5 291 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Fndc7A2AED3 737 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Gm8888J3QPX5 126 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Vmn2r58K7N6V2 862 aa14.74□□□□□ -0.05
Shh-201ENSMUST00000002708 Adam10O35598 749 aa14.74□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 191.4 ms