RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 M0R135 149 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 INMTO95050 263 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 IGKV3-15P01624 115 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 ANXA2P07355 339 aaKnown RBP8.12□□□□□ -1.11
PHGDH-228ENST00000641847 DBHP09172 617 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 COX5BP10606 129 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 PAX1P15863 534 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 PPP3CBP16298 524 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 ZNF14P17017 642 aaPredicted RBP8.12□□□□□ -1.11
PHGDH-228ENST00000641847 STOMP27105 288 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 APLNRP35414 380 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 CX3CR1P49238 355 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 GDI2P50395 445 aaKnown RBP8.12□□□□□ -1.11
PHGDH-228ENST00000641847 ZNF83P51522 516 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 PRKXP51817 358 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 GTF2A1P52655 376 aaPredicted RBP8.12□□□□□ -1.11
PHGDH-228ENST00000641847 GBX2P52951 348 aaPredicted RBP8.12□□□□□ -1.11
PHGDH-228ENST00000641847 GP2P55259 537 aaKnown RBP8.12□□□□□ -1.11
PHGDH-228ENST00000641847 TAS2R43P59537 309 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 GALK2Q01415 458 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 MFGE8Q08431 387 aaPredicted RBP8.12□□□□□ -1.11
PHGDH-228ENST00000641847 MRPL28Q13084 256 aaKnown RBP8.12□□□□□ -1.11
PHGDH-228ENST00000641847 TIGD6Q17RP2 521 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 CLEC12BQ2HXU8 276 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 ZNF829Q3KNS6 432 aaPredicted RBP8.12□□□□□ -1.11
PHGDH-228ENST00000641847 KRTAP27-1Q3LI81 207 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 C1QTNF12Q5T7M4 302 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 RHOUQ7L0Q8 258 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 MYPOPQ86VE0 399 aaPredicted RBP8.12□□□□□ -1.11
PHGDH-228ENST00000641847 EGFL6Q8IUX8 553 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 ZFP41Q8N8Y5 198 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 SLC30A7Q8NEW0 376 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 HSD17B8Q92506 261 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 UFD1Q92890 307 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 ZNF799Q96GE5 643 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 ZC3HAV1LQ96H79 300 aaKnown RBP8.12□□□□□ -1.11
PHGDH-228ENST00000641847 ZNF75AQ96N20 296 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 OPALINQ96PE5 141 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 C1QTNF6Q9BXI9 259 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 BEX2Q9BXY8 128 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 REG4Q9BYZ8 158 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 NIPAL2Q9H841 368 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 MOB1AQ9H8S9 216 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 MOV10Q9HCE1 1003 aaKnown RBP8.12□□□□□ -1.11
PHGDH-228ENST00000641847 FAM206AQ9NX38 181 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 BABAM2Q9NXR7 383 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 NPAP1Q9NZP6 1156 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 CRNNQ9UBG3 495 aaPredicted RBP8.12□□□□□ -1.11
PHGDH-228ENST00000641847 GTF2A1LQ9UNN4 478 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 BOLA1Q9Y3E2 137 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 R4GMQ9 66 aa8.12□□□□□ -1.11
PHGDH-228ENST00000641847 LOC100509620A0A075B734 347 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 IGHV1-18A0A0C4DH31 117 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 PNMA8CA0A1B0GUJ8 204 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 C5orf49A4QMS7 147 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 LOC110117498-PIK3R3F6TDL0 507 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 M0R1B8 84 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 SPRY1O43609 319 aaPredicted RBP8.11□□□□□ -1.11
PHGDH-228ENST00000641847 SRSF10O75494 262 aaKnown RBP8.11□□□□□ -1.11
PHGDH-228ENST00000641847 IGLV1-44P01699 117 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 APOC1P02654 83 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 SERPINA5P05154 406 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 TFAP2AP05549 437 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 THBDP07204 575 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 ACSM4P0C7M7 580 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 CECR9P0C854 216 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 CCL2P13500 99 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 JUNBP17275 347 aaPredicted RBP8.11□□□□□ -1.11
PHGDH-228ENST00000641847 CCNOP22674 350 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 PAX7P23759 505 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 OTX1P32242 354 aaPredicted RBP8.11□□□□□ -1.11
PHGDH-228ENST00000641847 DCTDP32321 178 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 SLC6A9P48067 706 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 TGM4P49221 684 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 NR1H2P55055 460 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 TPTEP56180 551 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 ZNF121P58317 390 aaPredicted RBP8.11□□□□□ -1.11
PHGDH-228ENST00000641847 HGFACQ04756 655 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 KRTAP1-1Q07627 177 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 ACSM1Q08AH1 577 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 MLLT11Q13015 90 aaPredicted RBP8.11□□□□□ -1.11
PHGDH-228ENST00000641847 CDK5R1Q15078 307 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 TSTQ16762 297 aaKnown RBP8.11□□□□□ -1.11
PHGDH-228ENST00000641847 TBC1D28Q2M2D7 210 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 KRTAP24-1Q3LI83 254 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 ARMCX4Q5H9R4 360 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 WDR38Q5JTN6 314 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 BCL2L15Q5TBC7 163 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 ZNF544Q6NX49 715 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 DRAM2Q6UX65 266 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 SEZ6L2Q6UXD5 910 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 SSX8Q7RTT4 187 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 WFDC8Q8IUA0 241 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 PAQR4Q8N4S7 273 aaPredicted RBP8.11□□□□□ -1.11
PHGDH-228ENST00000641847 FAM169BQ8N8A8 192 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 OR1J2Q8NGS2 313 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 HAVCR2Q8TDQ0 301 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 RNF166Q96A37 237 aaPredicted RBP8.11□□□□□ -1.11
PHGDH-228ENST00000641847 C4orf45Q96LM5 186 aa8.11□□□□□ -1.11
PHGDH-228ENST00000641847 COG8Q96MW5 612 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms