RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 TRBV6-7A0A0A0MS04 114 aa17.88■□□□□ 0.45
SYNGAP1-227ENST00000638142 A0A1W2PR77 199 aa17.88■□□□□ 0.45
SYNGAP1-227ENST00000638142 F8VVB4 439 aa17.88■□□□□ 0.45
SYNGAP1-227ENST00000638142 F8VWA3 439 aa17.88■□□□□ 0.45
SYNGAP1-227ENST00000638142 FGF16O43320 207 aa17.88■□□□□ 0.45
SYNGAP1-227ENST00000638142 CHRM2P08172 466 aa17.88■□□□□ 0.45
SYNGAP1-227ENST00000638142 CX3CR1P49238 355 aa17.88■□□□□ 0.45
SYNGAP1-227ENST00000638142 HOXA1P49639 335 aaPredicted RBP17.88■□□□□ 0.45
SYNGAP1-227ENST00000638142 SUMO3P55854 103 aaPredicted RBP17.88■□□□□ 0.45
SYNGAP1-227ENST00000638142 CYCSP99999 105 aaKnown RBP17.88■□□□□ 0.45
SYNGAP1-227ENST00000638142 C17orf67Q0P5P2 114 aa17.88■□□□□ 0.45
SYNGAP1-227ENST00000638142 ARMC10Q8N2F6 343 aa17.88■□□□□ 0.45
SYNGAP1-227ENST00000638142 OR13C9Q8NGT0 318 aa17.88■□□□□ 0.45
SYNGAP1-227ENST00000638142 DDIT4LQ96D03 193 aa17.88■□□□□ 0.45
SYNGAP1-227ENST00000638142 PIK3IP1Q96FE7 263 aa17.88■□□□□ 0.45
SYNGAP1-227ENST00000638142 C5orf34Q96MH7 638 aa17.88■□□□□ 0.45
SYNGAP1-227ENST00000638142 CDC6Q99741 560 aa17.88■□□□□ 0.45
SYNGAP1-227ENST00000638142 FN3KRPQ9HA64 309 aa17.88■□□□□ 0.45
SYNGAP1-227ENST00000638142 TEX13DA0A0J9YY54 714 aaPredicted RBP17.88■□□□□ 0.45
SYNGAP1-227ENST00000638142 C5orf51A6NDU8 294 aa17.88■□□□□ 0.45
SYNGAP1-227ENST00000638142 LMO7DNF2Z398 122 aa17.88■□□□□ 0.45
SYNGAP1-227ENST00000638142 HFEQ30201 348 aa17.88■□□□□ 0.45
SYNGAP1-227ENST00000638142 ANGPTL5Q86XS5 388 aa17.88■□□□□ 0.45
SYNGAP1-227ENST00000638142 OR4K15Q8NH41 348 aa17.88■□□□□ 0.45
SYNGAP1-227ENST00000638142 PISDQ9UG56 409 aa17.88■□□□□ 0.45
SYNGAP1-227ENST00000638142 SUSD2Q9UGT4 822 aa17.88■□□□□ 0.45
SYNGAP1-227ENST00000638142 FBXO9Q9UK97 447 aaPredicted RBP17.88■□□□□ 0.45
SYNGAP1-227ENST00000638142 A0A1B0GX78 115 aa17.87■□□□□ 0.45
SYNGAP1-227ENST00000638142 TPT1P13693 172 aaKnown RBP17.87■□□□□ 0.45
SYNGAP1-227ENST00000638142 ZNF93P35789 620 aaPredicted RBP17.87■□□□□ 0.45
SYNGAP1-227ENST00000638142 RNF4P78317 190 aa17.87■□□□□ 0.45
SYNGAP1-227ENST00000638142 NAAAQ02083 359 aa17.87■□□□□ 0.45
SYNGAP1-227ENST00000638142 LANCL3Q6ZV70 420 aa17.87■□□□□ 0.45
SYNGAP1-227ENST00000638142 PUSL1Q8N0Z8 303 aaKnown RBP17.87■□□□□ 0.45
SYNGAP1-227ENST00000638142 MOB1AQ9H8S9 216 aa17.87■□□□□ 0.45
SYNGAP1-227ENST00000638142 FANCFQ9NPI8 374 aa17.87■□□□□ 0.45
SYNGAP1-227ENST00000638142 ASF1BQ9NVP2 202 aa17.87■□□□□ 0.45
SYNGAP1-227ENST00000638142 KLHL13Q9P2N7 655 aa17.87■□□□□ 0.45
SYNGAP1-227ENST00000638142 CTSFQ9UBX1 484 aa17.87■□□□□ 0.45
SYNGAP1-227ENST00000638142 ANAPC10Q9UM13 185 aa17.87■□□□□ 0.45
SYNGAP1-227ENST00000638142 CSAG2Q9Y5P2 127 aa17.87■□□□□ 0.45
SYNGAP1-227ENST00000638142 CCDC85CA6NKD9 419 aa17.87■□□□□ 0.45
SYNGAP1-227ENST00000638142 PMP2P02689 132 aa17.87■□□□□ 0.45
SYNGAP1-227ENST00000638142 PGAM2P15259 253 aa17.87■□□□□ 0.45
SYNGAP1-227ENST00000638142 CD27P26842 260 aa17.87■□□□□ 0.45
SYNGAP1-227ENST00000638142 SERPINF1P36955 418 aa17.87■□□□□ 0.45
SYNGAP1-227ENST00000638142 EMP2P54851 167 aa17.87■□□□□ 0.45
SYNGAP1-227ENST00000638142 PNLIPRP3Q17RR3 467 aa17.87■□□□□ 0.45
SYNGAP1-227ENST00000638142 UNQ6126/PRO20091Q6UXV3 157 aa17.87■□□□□ 0.45
SYNGAP1-227ENST00000638142 D2HGDHQ8N465 521 aa17.87■□□□□ 0.45
SYNGAP1-227ENST00000638142 PLPP5Q8NEB5 264 aa17.87■□□□□ 0.45
SYNGAP1-227ENST00000638142 ARID1BQ8NFD5 2236 aaPredicted RBP17.87■□□□□ 0.45
SYNGAP1-227ENST00000638142 MARCH1Q8TCQ1 289 aa17.87■□□□□ 0.45
SYNGAP1-227ENST00000638142 FOXQ1Q9C009 403 aa17.87■□□□□ 0.45
SYNGAP1-227ENST00000638142 B3GALT5Q9Y2C3 310 aa17.87■□□□□ 0.45
SYNGAP1-227ENST00000638142 IGHV1OR15-9A0A0B4J2B8 117 aa17.86■□□□□ 0.45
SYNGAP1-227ENST00000638142 ZNF98A6NK75 572 aa17.86■□□□□ 0.45
SYNGAP1-227ENST00000638142 GPR31O00270 319 aa17.86■□□□□ 0.45
SYNGAP1-227ENST00000638142 GSTP1P09211 210 aaKnown RBP17.86■□□□□ 0.45
SYNGAP1-227ENST00000638142 ZNF20P17024 532 aa17.86■□□□□ 0.45
SYNGAP1-227ENST00000638142 ACTBL2Q562R1 376 aa17.86■□□□□ 0.45
SYNGAP1-227ENST00000638142 TMEM128Q5BJH2 165 aa17.86■□□□□ 0.45
SYNGAP1-227ENST00000638142 C1orf189Q5VU69 101 aa17.86■□□□□ 0.45
SYNGAP1-227ENST00000638142 ZNF101Q8IZC7 436 aa17.86■□□□□ 0.45
SYNGAP1-227ENST00000638142 GTPBP8Q8N3Z3 284 aaPredicted RBP17.86■□□□□ 0.45
SYNGAP1-227ENST00000638142 SLC30A7Q8NEW0 376 aa17.86■□□□□ 0.45
SYNGAP1-227ENST00000638142 OR10S1Q8NGN2 331 aa17.86■□□□□ 0.45
SYNGAP1-227ENST00000638142 TERB2Q8NHR7 220 aa17.86■□□□□ 0.45
SYNGAP1-227ENST00000638142 LPAR5Q9H1C0 372 aa17.86■□□□□ 0.45
SYNGAP1-227ENST00000638142 ALKBH4Q9NXW9 302 aa17.86■□□□□ 0.45
SYNGAP1-227ENST00000638142 ZNF217O75362 1048 aa17.86■□□□□ 0.45
SYNGAP1-227ENST00000638142 BIDP55957 195 aa17.86■□□□□ 0.45
SYNGAP1-227ENST00000638142 LDLRAD3Q86YD5 345 aa17.86■□□□□ 0.45
SYNGAP1-227ENST00000638142 ARRDC1Q8N5I2 433 aa17.86■□□□□ 0.45
SYNGAP1-227ENST00000638142 DCUN1D4Q92564 292 aa17.86■□□□□ 0.45
SYNGAP1-227ENST00000638142 MLXQ9UH92 298 aa17.86■□□□□ 0.45
SYNGAP1-227ENST00000638142 C13orf42A0A1B0GVH6 325 aa17.85■□□□□ 0.45
SYNGAP1-227ENST00000638142 A0A1W2PNV4 684 aa17.85■□□□□ 0.45
SYNGAP1-227ENST00000638142 LIPT2A6NK58 231 aa17.85■□□□□ 0.45
SYNGAP1-227ENST00000638142 FOLR1P15328 257 aa17.85■□□□□ 0.45
SYNGAP1-227ENST00000638142 LAP3P28838 519 aa17.85■□□□□ 0.45
SYNGAP1-227ENST00000638142 SCRN3Q0VDG4 424 aa17.85■□□□□ 0.45
SYNGAP1-227ENST00000638142 VAX1Q5SQQ9 334 aa17.85■□□□□ 0.45
SYNGAP1-227ENST00000638142 C10orf91Q5T1B1 145 aa17.85■□□□□ 0.45
SYNGAP1-227ENST00000638142 COX15Q7KZN9 410 aa17.85■□□□□ 0.45
SYNGAP1-227ENST00000638142 SYT13Q7L8C5 426 aa17.85■□□□□ 0.45
SYNGAP1-227ENST00000638142 TMEM100Q9NV29 134 aa17.85■□□□□ 0.45
SYNGAP1-227ENST00000638142 SZT2Q5T011 3432 aa17.85■□□□□ 0.45
SYNGAP1-227ENST00000638142 C2orf72A6NCS6 295 aa17.84■□□□□ 0.45
SYNGAP1-227ENST00000638142 VSTM2BA6NLU5 285 aa17.84■□□□□ 0.45
SYNGAP1-227ENST00000638142 CEACAM18A8MTB9 384 aa17.84■□□□□ 0.45
SYNGAP1-227ENST00000638142 NUDT19A8MXV4 375 aa17.84■□□□□ 0.45
SYNGAP1-227ENST00000638142 FBXW4P57775 412 aa17.84■□□□□ 0.45
SYNGAP1-227ENST00000638142 OR1D5P58170 312 aa17.84■□□□□ 0.45
SYNGAP1-227ENST00000638142 HNRNPKP61978 463 aaKnown RBP eCLIP17.84■□□□□ 0.45
SYNGAP1-227ENST00000638142 HAGHLQ6PII5 290 aaPredicted RBP17.84■□□□□ 0.45
SYNGAP1-227ENST00000638142 PLXDC1Q8IUK5 500 aa17.84■□□□□ 0.45
SYNGAP1-227ENST00000638142 BAP18Q8IXM2 172 aa17.84■□□□□ 0.45
SYNGAP1-227ENST00000638142 NICN1Q9BSH3 213 aa17.84■□□□□ 0.45
SYNGAP1-227ENST00000638142 TPSD1Q9BZJ3 242 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms