RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 KNG1P01042 644 aa12.46□□□□□ -0.42
CACNA1A-228ENST00000636610 ZBTB25P24278 435 aa12.46□□□□□ -0.42
CACNA1A-228ENST00000636610 CD27P26842 260 aa12.46□□□□□ -0.42
CACNA1A-228ENST00000636610 SLC6A9P48067 706 aa12.46□□□□□ -0.42
CACNA1A-228ENST00000636610 ARFRP1Q13795 201 aa12.46□□□□□ -0.42
CACNA1A-228ENST00000636610 OVCH2Q7RTZ1 564 aa12.46□□□□□ -0.42
CACNA1A-228ENST00000636610 NAXDQ8IW45 347 aa12.46□□□□□ -0.42
CACNA1A-228ENST00000636610 LRRC18Q8N456 261 aa12.46□□□□□ -0.42
CACNA1A-228ENST00000636610 PHB2Q99623 299 aa12.46□□□□□ -0.42
CACNA1A-228ENST00000636610 SAV1Q9H4B6 383 aaPredicted RBP12.46□□□□□ -0.42
CACNA1A-228ENST00000636610 GPR27Q9NS67 375 aa12.46□□□□□ -0.42
CACNA1A-228ENST00000636610 A0A1W2PR77 199 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 F5H5K5 113 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 SSX5O60225 188 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 OR2J2O76002 312 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 HEXBP07686 556 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 CASRP41180 1078 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 CLDN6P56747 220 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 SGCAQ16586 387 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 MICBQ29980 383 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 COL13A1Q5TAT6 717 aaPredicted RBP12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 C1orf198Q9H425 327 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 METTL7AQ9H8H3 244 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 SLC2A4RGQ9NR83 387 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 FAM206AQ9NX38 181 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 NUP210LQ5VU65 1888 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 A0A0A6YYD4 124 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 MEGF11A6BM72 1044 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 VSTM2BA6NLU5 285 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 E9PLN8 166 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 RAB3AP20336 220 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 SNTB1Q13884 538 aaKnown RBP12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 BATF2Q8N1L9 274 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 SLC25A45Q8N413 288 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 APCDD1LQ8NCL9 501 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 TMEM234Q8WY98 164 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 AQP3Q92482 292 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 ARHGAP5-AS1Q96IT6 56 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 PRRT1Q99946 306 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 CHST11Q9NPF2 352 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 RASL12Q9NYN1 266 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 PPP4R1LQ9P1A2 415 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 RAB22AQ9UL26 194 aa12.45□□□□□ -0.42
CACNA1A-228ENST00000636610 A0A1B0GTQ1 180 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 MSGN1A6NI15 193 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 LDLRAD4O15165 306 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 ZNHIT1O43257 154 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 RAD51DO75771 328 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 HOXB5P09067 269 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 NAGAP17050 411 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 CNR1P21554 472 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 PI4KAP42356 2102 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 SCAND1P57086 179 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 ZNF121P58317 390 aaPredicted RBP12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 S100A10P60903 97 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 DCAF7P61962 342 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 GUCA2BQ16661 112 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 TMEM176BQ3YBM2 270 aaPredicted RBP12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 PLAC9Q5JTB6 97 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 TMEM71Q6P5X7 295 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 C1QL2Q7Z5L3 287 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 ZNF283Q8N7M2 679 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 OR5D14Q8NGL3 314 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 RRNAD1Q96FB5 475 aaKnown RBP12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 ARPC5LQ9BPX5 153 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 CHMP1AQ9HD42 196 aaPredicted RBP12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 MRPS28Q9Y2Q9 187 aaKnown RBP12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 ZDBF2Q9HCK1 2354 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 OR6C76A6NM76 312 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 EFSO43281 561 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 AQP8O94778 261 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 AGTR1P30556 359 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 DHPSP49366 369 aaPredicted RBP12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 MPPED2Q15777 294 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 PLXDC1Q8IUK5 500 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 CBLN2Q8IUK8 224 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 SLC22A24Q8N4F4 322 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 KCNRGQ8N5I3 272 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 OR10R2Q8NGX6 335 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 RNF133Q8WVZ7 376 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 SLC39A7Q92504 469 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 FOXRED1Q96CU9 486 aaPredicted RBP12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 JSRP1Q96MG2 331 aaPredicted RBP12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 OR6C1Q96RD1 312 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 GAREM1Q9H706 876 aa12.44□□□□□ -0.42
CACNA1A-228ENST00000636610 TUBAL3A6NHL2 446 aa12.43□□□□□ -0.42
CACNA1A-228ENST00000636610 DUX1O43812 170 aa12.43□□□□□ -0.42
CACNA1A-228ENST00000636610 CELA2AP08217 269 aa12.43□□□□□ -0.42
CACNA1A-228ENST00000636610 UBBP0CG47 229 aa12.43□□□□□ -0.42
CACNA1A-228ENST00000636610 UBCP0CG48 685 aaKnown RBP12.43□□□□□ -0.42
CACNA1A-228ENST00000636610 DAP3P51398 398 aaKnown RBP12.43□□□□□ -0.42
CACNA1A-228ENST00000636610 AKR1D1P51857 326 aa12.43□□□□□ -0.42
CACNA1A-228ENST00000636610 RPS27AP62979 156 aaKnown RBP12.43□□□□□ -0.42
CACNA1A-228ENST00000636610 UBA52P62987 128 aaKnown RBP12.43□□□□□ -0.42
CACNA1A-228ENST00000636610 DNM1P34Q6PK57 102 aa12.43□□□□□ -0.42
CACNA1A-228ENST00000636610 CLEC9AQ6UXN8 241 aa12.43□□□□□ -0.42
CACNA1A-228ENST00000636610 TFAP2EQ6VUC0 442 aa12.43□□□□□ -0.42
CACNA1A-228ENST00000636610 SLC25A42Q86VD7 318 aa12.43□□□□□ -0.42
CACNA1A-228ENST00000636610 OR2AJ1Q8NGZ0 328 aa12.43□□□□□ -0.42
CACNA1A-228ENST00000636610 OR51F2Q8NH61 342 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms