RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 MED31Q9Y3C7 131 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 WIF1Q9Y5W5 379 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 DCHS1Q96JQ0 3298 aa10.32□□□□□ -0.76
LINC00538-201ENST00000626109 A0A0U1RRA0 63 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 NUPL2O15504 423 aaKnown RBP10.31□□□□□ -0.76
LINC00538-201ENST00000626109 SCO2O43819 266 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 NXPH2O95156 264 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 SLC2A10O95528 541 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 WT1P19544 449 aaPredicted RBP10.31□□□□□ -0.76
LINC00538-201ENST00000626109 ZNF136P52737 540 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 RPS7P62081 194 aaKnown RBP10.31□□□□□ -0.76
LINC00538-201ENST00000626109 EXOSC7Q15024 291 aaKnown RBP10.31□□□□□ -0.76
LINC00538-201ENST00000626109 IDNKQ5T6J7 187 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 ZNF613Q6PF04 617 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 SMARCD3Q6STE5 483 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 PAMR1Q6UXH9 720 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 TMEM91Q6ZNR0 172 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 TMPRSS11FQ6ZWK6 438 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 FAM71CQ8NEG0 241 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 NFAM1Q8NET5 270 aaPredicted RBP10.31□□□□□ -0.76
LINC00538-201ENST00000626109 OR52R1Q8NGF1 315 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 OR5W2Q8NH69 310 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 SLC25A28Q96A46 364 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 CREB3L1Q96BA8 519 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 TTYH2Q9BSA4 534 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 MARVELD1Q9BSK0 173 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 IFT27Q9BW83 186 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 NIPAL2Q9H841 368 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 ZNF223Q9UK11 482 aaPredicted RBP10.31□□□□□ -0.76
LINC00538-201ENST00000626109 TMEM8BA6NDV4 472 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 BHLHE40O14503 412 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 NKX2-8O15522 239 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 PLPP2O43688 288 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 NCR1O76036 304 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 CBX7O95931 251 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 IFNGP01579 166 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 IGKV3-11P04433 115 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 S1PR1P21453 382 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 DTYMKP23919 212 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 RFX3P48380 749 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 RAB9AP51151 201 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 RRADP55042 308 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 ADORA2A-AS1P86434 159 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 PON3Q15166 354 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 KLHL12Q53G59 568 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 MRPL2Q5T653 305 aaKnown RBP10.31□□□□□ -0.76
LINC00538-201ENST00000626109 ATP1A1-AS1Q5TC04 95 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 FHL5Q5TD97 284 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 ABLIM2Q6H8Q1 611 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 S100A7AQ86SG5 101 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 MS4A15Q8N5U1 240 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 NANPQ8TBE9 248 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 M1APQ8TC57 530 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 ZNF721Q8TF20 911 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 BPIFA2Q96DR5 249 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 IMMP1LQ96LU5 166 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 PRSS27Q9BQR3 290 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 NUDT9Q9BW91 350 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 OR10A5Q9H207 317 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 GSX1Q9H4S2 264 aaPredicted RBP10.31□□□□□ -0.76
LINC00538-201ENST00000626109 CYSLTR2Q9NS75 346 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 PRODH2Q9UF12 536 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 RAXQ9Y2V3 346 aa10.31□□□□□ -0.76
LINC00538-201ENST00000626109 CDHR4A6H8M9 788 aa10.3□□□□□ -0.76
LINC00538-201ENST00000626109 FAM183AA6NL82 134 aa10.3□□□□□ -0.76
LINC00538-201ENST00000626109 LINC00587B1AMM8 73 aa10.3□□□□□ -0.76
LINC00538-201ENST00000626109 NTN1O95631 604 aa10.3□□□□□ -0.76
LINC00538-201ENST00000626109 SAGP10523 405 aaPredicted RBP10.3□□□□□ -0.76
LINC00538-201ENST00000626109 PSMD4P55036 377 aaKnown RBP10.3□□□□□ -0.76
LINC00538-201ENST00000626109 CTBP2P56545 445 aa10.3□□□□□ -0.76
LINC00538-201ENST00000626109 BTG1P62324 171 aa10.3□□□□□ -0.76
LINC00538-201ENST00000626109 POU6F2P78424 691 aaPredicted RBP10.3□□□□□ -0.76
LINC00538-201ENST00000626109 CD69Q07108 199 aa10.3□□□□□ -0.76
LINC00538-201ENST00000626109 P2RY14Q15391 338 aa10.3□□□□□ -0.76
LINC00538-201ENST00000626109 ZSWIM7Q19AV6 140 aa10.3□□□□□ -0.76
LINC00538-201ENST00000626109 SLC29A4Q7RTT9 530 aa10.3□□□□□ -0.76
LINC00538-201ENST00000626109 GTPBP8Q8N3Z3 284 aaPredicted RBP10.3□□□□□ -0.76
LINC00538-201ENST00000626109 FBXO17Q96EF6 278 aa10.3□□□□□ -0.76
LINC00538-201ENST00000626109 MRPL48Q96GC5 212 aaKnown RBP10.3□□□□□ -0.76
LINC00538-201ENST00000626109 TEAD3Q99594 435 aa10.3□□□□□ -0.76
LINC00538-201ENST00000626109 ISG20L2Q9H9L3 353 aaKnown RBP10.3□□□□□ -0.76
LINC00538-201ENST00000626109 NLKQ9UBE8 527 aa10.3□□□□□ -0.76
LINC00538-201ENST00000626109 SLC35A3Q9Y2D2 325 aa10.3□□□□□ -0.76
LINC00538-201ENST00000626109 ALG5Q9Y673 324 aa10.3□□□□□ -0.76
LINC00538-201ENST00000626109 CACNA1AO00555 2505 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 TRBV11-1A0A0K0K1C0 115 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 OR2AT4A6NND4 320 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 INMT-MINDY4F8WBC2 141 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 BET1O15155 118 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 C1QBP02746 253 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 LYL1P12980 280 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 PPP3CBP16298 524 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 MAKP20794 623 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 GPR143P51810 404 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 UCNP55089 124 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 SLC37A1P57057 533 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 TLE3Q04726 772 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 SMCO1Q147U7 214 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 DCAF10Q5QP82 559 aa10.29□□□□□ -0.76
LINC00538-201ENST00000626109 CCNJQ5T5M9 372 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms