RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 PARP12Q9H0J9 701 aaKnown RBP11.51□□□□□ -0.57
MSH6-215ENST00000622629 A0A0B4J293 547 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 FAM221AA4D161 298 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 GSTZ1O43708 216 aaPredicted RBP11.5□□□□□ -0.57
MSH6-215ENST00000622629 MRPL33O75394 65 aaKnown RBP11.5□□□□□ -0.57
MSH6-215ENST00000622629 WNT11O96014 354 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 HLA-DQB1P01920 261 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 TCN2P20062 427 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 RAB6AP20340 208 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 EPHA1P21709 976 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 TAF9Q16594 264 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 LPCAT3Q6P1A2 487 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 BEND4Q6ZU67 534 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 NR2C2APQ86WQ0 139 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 ZNF695Q8IW36 515 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 IL1F10Q8WWZ1 152 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 SGCZQ96LD1 299 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 GNRHR2Q96P88 292 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 TTC28Q96AY4 2481 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 FNDC1Q4ZHG4 1894 aaPredicted RBP11.5□□□□□ -0.57
MSH6-215ENST00000622629 SULT1C2O00338 296 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 ADAM11O75078 769 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 ACSM4P0C7M7 580 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 EPHA4P54764 986 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 MFGE8Q08431 387 aaPredicted RBP11.5□□□□□ -0.57
MSH6-215ENST00000622629 DHRS2Q13268 280 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 SNTB1Q13884 538 aaKnown RBP11.5□□□□□ -0.57
MSH6-215ENST00000622629 ISXQ2M1V0 245 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 ZNF626Q68DY1 528 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.5□□□□□ -0.57
MSH6-215ENST00000622629 MAML2Q8IZL2 1156 aaPredicted RBP11.5□□□□□ -0.57
MSH6-215ENST00000622629 SPEM1Q8N4L4 309 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 SCARF2Q96GP6 870 aaPredicted RBP11.5□□□□□ -0.57
MSH6-215ENST00000622629 TP53BP1Q12888 1972 aaPredicted RBP11.5□□□□□ -0.57
MSH6-215ENST00000622629 LOC102725191A0A1B0GVB3 256 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 M0R135 149 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 CTDSPLO15194 276 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 FAHP16930 419 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 PSMB6P28072 239 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 EFNA3P52797 238 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 NXPH1P58417 271 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 CCL7P80098 99 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 STK11Q15831 433 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 KIF26BQ2KJY2 2108 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 OGFOD3Q6PK18 319 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 ZNF813Q6ZN06 617 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 C9orf40Q8IXQ3 194 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 SMRP1Q8NCR6 262 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 ZNF799Q96GE5 643 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 NXT1Q9UKK6 140 aaKnown RBP11.5□□□□□ -0.57
MSH6-215ENST00000622629 DOCK9Q9BZ29 2069 aa11.5□□□□□ -0.57
MSH6-215ENST00000622629 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 MCRIP1C9JLW8 97 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 D6RAR5 112 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 ERVH48-1M5A8F1 160 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 TNFSF12O43508 249 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 SSX5O60225 188 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 OMGP23515 440 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 HLXQ14774 488 aaPredicted RBP11.49□□□□□ -0.57
MSH6-215ENST00000622629 ACOT7LQ6ZUV0 252 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 ESX1Q8N693 406 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 FAM181AQ8N9Y4 354 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 CCDC71LQ8N9Z2 235 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 TTC9Q92623 222 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.49□□□□□ -0.57
MSH6-215ENST00000622629 FAM86C1Q9NVL1 165 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 PADI1Q9ULC6 663 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 EDARQ9UNE0 448 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 SGCEO43556 437 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 ENPP1P22413 925 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 TMEM229BQ8NBD8 167 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 ST8SIA2Q92186 375 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 CCDC74BQ96LY2 380 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 OXGR1Q96P68 337 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 CNTD2Q9H8S5 307 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 ZNF14P17017 642 aaPredicted RBP11.49□□□□□ -0.57
MSH6-215ENST00000622629 PLA2G7Q13093 441 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 TMPPEQ6ZT21 453 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 KMT5CQ86Y97 462 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 EXD3Q8N9H8 876 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 SPACA9Q96E40 222 aaPredicted RBP11.49□□□□□ -0.57
MSH6-215ENST00000622629 CLCC1Q96S66 551 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 PIGQQ9BRB3 760 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 NARFLQ9H6Q4 476 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 A6NCN8 305 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 OR2F2O95006 317 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 PPT1P50897 306 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 OR2F1Q13607 317 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 SVBPQ8N300 66 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 ZBTB44Q8NCP5 570 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 OR4D10Q8NGI6 311 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 RNF141Q8WVD5 230 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 ZNRF4Q8WWF5 429 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 CA10Q9NS85 328 aa11.49□□□□□ -0.57
MSH6-215ENST00000622629 ZNF44P15621 663 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 CD96P40200 585 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 FBXW12Q6X9E4 464 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 LYG2Q86SG7 212 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 NAXDQ8IW45 347 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 PRSS35Q8N3Z0 413 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms