RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 TIMM10BQ9Y5J6 103 aa11.66□□□□□ -0.54
CHD1L-210ENST00000622533 A0A1W2PPE2 198 aa11.66□□□□□ -0.54
CHD1L-210ENST00000622533 MEGF11A6BM72 1044 aa11.66□□□□□ -0.54
CHD1L-210ENST00000622533 MFNGO00587 321 aa11.66□□□□□ -0.54
CHD1L-210ENST00000622533 STK17BO94768 372 aa11.66□□□□□ -0.54
CHD1L-210ENST00000622533 IL33O95760 270 aa11.66□□□□□ -0.54
CHD1L-210ENST00000622533 COL9A1P20849 921 aa11.66□□□□□ -0.54
CHD1L-210ENST00000622533 EGR4Q05215 589 aa11.66□□□□□ -0.54
CHD1L-210ENST00000622533 TEX30Q5JUR7 227 aa11.66□□□□□ -0.54
CHD1L-210ENST00000622533 KCTD18Q6PI47 426 aaPredicted RBP11.66□□□□□ -0.54
CHD1L-210ENST00000622533 UNQ6494/PRO21346Q6UXR6 183 aa11.66□□□□□ -0.54
CHD1L-210ENST00000622533 MED25Q71SY5 747 aa11.66□□□□□ -0.54
CHD1L-210ENST00000622533 DNAJA3Q96EY1 480 aa11.66□□□□□ -0.54
CHD1L-210ENST00000622533 CMKLR1Q99788 373 aa11.66□□□□□ -0.54
CHD1L-210ENST00000622533 ELOVL3Q9HB03 270 aa11.66□□□□□ -0.54
CHD1L-210ENST00000622533 HS3ST3A1Q9Y663 406 aa11.66□□□□□ -0.54
CHD1L-210ENST00000622533 MRPS18BQ9Y676 258 aaKnown RBP11.66□□□□□ -0.54
CHD1L-210ENST00000622533 DMDP11532 3685 aa11.66□□□□□ -0.54
CHD1L-210ENST00000622533 EFSO43281 561 aa11.65□□□□□ -0.54
CHD1L-210ENST00000622533 NSA2O95478 260 aaKnown RBP11.65□□□□□ -0.54
CHD1L-210ENST00000622533 KLF8O95600 359 aaPredicted RBP11.65□□□□□ -0.54
CHD1L-210ENST00000622533 IL2RAP01589 272 aa11.65□□□□□ -0.54
CHD1L-210ENST00000622533 FSTP19883 344 aa11.65□□□□□ -0.54
CHD1L-210ENST00000622533 SQSTM1Q13501 440 aa11.65□□□□□ -0.54
CHD1L-210ENST00000622533 DBX2Q6ZNG2 339 aa11.65□□□□□ -0.54
CHD1L-210ENST00000622533 FOXRED2Q8IWF2 684 aa11.65□□□□□ -0.54
CHD1L-210ENST00000622533 ARRDC1Q8N5I2 433 aa11.65□□□□□ -0.54
CHD1L-210ENST00000622533 OR51F2Q8NH61 342 aa11.65□□□□□ -0.54
CHD1L-210ENST00000622533 SLC37A2Q8TED4 501 aa11.65□□□□□ -0.54
CHD1L-210ENST00000622533 PATE1Q8WXA2 126 aa11.65□□□□□ -0.54
CHD1L-210ENST00000622533 ZNF775Q96BV0 537 aaPredicted RBP11.65□□□□□ -0.54
CHD1L-210ENST00000622533 MTIF3Q9H2K0 278 aaKnown RBP11.65□□□□□ -0.54
CHD1L-210ENST00000622533 FAM60AQ9NP50 221 aa11.65□□□□□ -0.54
CHD1L-210ENST00000622533 HEATR5AQ86XA9 2040 aa11.65□□□□□ -0.54
CHD1L-210ENST00000622533 IFITM10A6NMD0 228 aa11.65□□□□□ -0.54
CHD1L-210ENST00000622533 NUDT21O43809 227 aaKnown RBP11.65□□□□□ -0.54
CHD1L-210ENST00000622533 BTF3P20290 206 aaKnown RBP11.65□□□□□ -0.54
CHD1L-210ENST00000622533 RAB6AP20340 208 aa11.65□□□□□ -0.54
CHD1L-210ENST00000622533 ITGA3P26006 1051 aa11.65□□□□□ -0.54
CHD1L-210ENST00000622533 RABIFP47224 123 aa11.65□□□□□ -0.54
CHD1L-210ENST00000622533 CD226Q15762 336 aa11.65□□□□□ -0.54
CHD1L-210ENST00000622533 GATSQ8NAP1 163 aa11.65□□□□□ -0.54
CHD1L-210ENST00000622533 ZNF784Q8NCA9 323 aaPredicted RBP11.65□□□□□ -0.54
CHD1L-210ENST00000622533 PIGQQ9BRB3 760 aa11.65□□□□□ -0.54
CHD1L-210ENST00000622533 ADAM19Q9H013 955 aa11.65□□□□□ -0.54
CHD1L-210ENST00000622533 SLC2A4RGQ9NR83 387 aa11.65□□□□□ -0.54
CHD1L-210ENST00000622533 FANCMQ8IYD8 2048 aa11.65□□□□□ -0.55
CHD1L-210ENST00000622533 HTR2CP28335 458 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 ROM1Q03395 351 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 MEF2DQ14814 521 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 MEP1BQ16820 701 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 PNLIPRP3Q17RR3 467 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 DEFB110Q30KQ9 67 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 TMEM225Q6GV28 225 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 FJX1Q86VR8 437 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 SEMA6DQ8NFY4 1073 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 OR51A2Q8NGJ7 313 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 PTX4Q96A99 478 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 RAB3CQ96E17 227 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 KTI12Q96EK9 354 aaPredicted RBP11.64□□□□□ -0.55
CHD1L-210ENST00000622533 RAB33BQ9H082 229 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 S1PR5Q9H228 398 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 RGCCQ9H4X1 137 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 SDHAF3Q9NRP4 125 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 WIF1Q9Y5W5 379 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 WDFY3Q8IZQ1 3526 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 OR6A2O95222 327 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 MT-ATP6P00846 226 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 IFNA2P01563 188 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 HLA-DQA2P01906 255 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 CD37P11049 281 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 TACR3P29371 465 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 HRH1P35367 487 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 DVL1P1P54792 670 aaPredicted RBP11.64□□□□□ -0.55
CHD1L-210ENST00000622533 SLC9A3R2Q15599 337 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 BTNL8Q6UX41 500 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 Q6ZRG5 221 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 Q6ZSR6 202 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 TTLL10Q6ZVT0 673 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 SLC35D2Q76EJ3 337 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 TRAPPC6BQ86SZ2 158 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 RTN4RL2Q86UN3 420 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 MARCH1Q8TCQ1 289 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 SAT2Q96F10 170 aaPredicted RBP11.64□□□□□ -0.55
CHD1L-210ENST00000622533 ZDHHC12Q96GR4 267 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 PRRT1Q99946 306 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 TAF9BQ9HBM6 251 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 SPACA1Q9HBV2 294 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 AMDHD2Q9Y303 409 aa11.64□□□□□ -0.55
CHD1L-210ENST00000622533 TRAV36DV7A0A075B6V5 113 aa11.63□□□□□ -0.55
CHD1L-210ENST00000622533 HCRTR1O43613 425 aa11.63□□□□□ -0.55
CHD1L-210ENST00000622533 UTS2O95399 124 aa11.63□□□□□ -0.55
CHD1L-210ENST00000622533 PLGP00747 810 aaPredicted RBP11.63□□□□□ -0.55
CHD1L-210ENST00000622533 CXCR1P25024 350 aa11.63□□□□□ -0.55
CHD1L-210ENST00000622533 RIDAP52758 137 aaKnown RBP11.63□□□□□ -0.55
CHD1L-210ENST00000622533 BTG2P78543 158 aa11.63□□□□□ -0.55
CHD1L-210ENST00000622533 MAMDC2Q7Z304 686 aaPredicted RBP11.63□□□□□ -0.55
CHD1L-210ENST00000622533 ADGRE4PQ86SQ3 457 aa11.63□□□□□ -0.55
CHD1L-210ENST00000622533 SLC25A43Q8WUT9 341 aaPredicted RBP11.63□□□□□ -0.55
CHD1L-210ENST00000622533 TAAR8Q969N4 342 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms