RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 NUDCD2Q8WVJ2 157 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 NKD1Q969G9 470 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 RELTQ969Z4 430 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 CMBLQ96DG6 245 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 C1orf147Q96MC9 270 aaPredicted RBP8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 PHB2Q99623 299 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 LPAR5Q9H1C0 372 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 SLC26A1Q9H2B4 701 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 PTGES2Q9H7Z7 377 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 ZMAT3Q9HA38 289 aaKnown RBP8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 IFT46Q9NQC8 304 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 KLRF1Q9NZS2 232 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 SHPKQ9UHJ6 478 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 ZNF230Q9UIE0 474 aaPredicted RBP8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 FARSAQ9Y285 508 aaKnown RBP8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 MRPS28Q9Y2Q9 187 aaKnown RBP8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 HDGFL3Q9Y3E1 203 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 CACNA1CQ13936 2221 aa8.52□□□□□ -1.05
IGHV3-54-201ENST00000622166 SEC16AO15027 2179 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 A0A0A6YYD4 124 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 KANTRA0A1W2PQU2 76 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 AQP7P3A6NL99 342 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 OR2AT4A6NND4 320 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 POM121CA8CG34 1229 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 H3BML4 177 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 SULT2B1O00204 365 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 SPDEFO95238 335 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 TIAF1O95411 115 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 IGLV3-1P01715 115 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 RLN2P04090 185 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 PRF1P14222 555 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 ZNF93P35789 620 aaPredicted RBP8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 EIF1P41567 113 aaKnown RBP8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 CBX5P45973 191 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 ZNF133P52736 654 aaPredicted RBP8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 GRB2P62993 217 aaKnown RBP8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 NKPD1Q17RQ9 610 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 HYAL4Q2M3T9 481 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 AWAT2Q6E213 333 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 C3orf33Q6P1S2 294 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 Q6ZSR3 168 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 FOXL2NBQ6ZUU3 175 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 DOK3Q7L591 496 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 CD163Q86VB7 1156 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 STPG2Q8N412 459 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 GVQW1Q8N7I0 195 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 CCDC54Q8NEL0 328 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 TMEM185AQ8NFB2 350 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 OR8B12Q8NGG6 310 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 OR13C9Q8NGT0 318 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 LHFPL5Q8TAF8 219 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 OR51E1Q8TCB6 317 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 ELP5Q8TE02 316 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 ST8SIA4Q92187 359 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 FBXW5Q969U6 566 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 NTNG2Q96CW9 530 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 MRPS24Q96EL2 167 aaKnown RBP8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 SHDQ96IW2 340 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 SPSB2Q99619 263 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 VRK1Q99986 396 aaPredicted RBP8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 OCSTAMPQ9BR26 566 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 MESP1Q9BRJ9 268 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 C1QTNF6Q9BXI9 259 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 SELENOIQ9C0D9 397 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 WDR13Q9H1Z4 485 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 METTL7AQ9H8H3 244 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 PNRC2Q9NPJ4 139 aaKnown RBP8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 MYOTQ9UBF9 498 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 C19orf25Q9UFG5 118 aaPredicted RBP8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 RARRES3Q9UL19 164 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 KCNK7Q9Y2U2 307 aa8.51□□□□□ -1.05
IGHV3-54-201ENST00000622166 SPAG17Q6Q759 2223 aa8.5□□□□□ -1.05
IGHV3-54-201ENST00000622166 A0A087WZY1 265 aa8.5□□□□□ -1.05
IGHV3-54-201ENST00000622166 TRBV6-7A0A0A0MS04 114 aa8.5□□□□□ -1.05
IGHV3-54-201ENST00000622166 LY6G6EA0A0G2JKS1 128 aa8.5□□□□□ -1.05
IGHV3-54-201ENST00000622166 CCSO14618 274 aa8.5□□□□□ -1.05
IGHV3-54-201ENST00000622166 CDC14BO60729 498 aa8.5□□□□□ -1.05
IGHV3-54-201ENST00000622166 SCRG1O75711 98 aa8.5□□□□□ -1.05
IGHV3-54-201ENST00000622166 IFNA6P05013 189 aa8.5□□□□□ -1.05
IGHV3-54-201ENST00000622166 CSN2P05814 226 aa8.5□□□□□ -1.05
IGHV3-54-201ENST00000622166 NR2C1P13056 603 aa8.5□□□□□ -1.05
IGHV3-54-201ENST00000622166 HIST1H1DP16402 221 aaKnown RBP8.5□□□□□ -1.05
IGHV3-54-201ENST00000622166 GNB3P16520 340 aa8.5□□□□□ -1.05
IGHV3-54-201ENST00000622166 PRKACBP22694 351 aa8.5□□□□□ -1.05
IGHV3-54-201ENST00000622166 HRH1P35367 487 aa8.5□□□□□ -1.05
IGHV3-54-201ENST00000622166 DLSTP36957 453 aa8.5□□□□□ -1.05
IGHV3-54-201ENST00000622166 ALDH3B1P43353 468 aa8.5□□□□□ -1.05
IGHV3-54-201ENST00000622166 ZNF121P58317 390 aaPredicted RBP8.5□□□□□ -1.05
IGHV3-54-201ENST00000622166 LSM6P62312 80 aaKnown RBP8.5□□□□□ -1.05
IGHV3-54-201ENST00000622166 HIST1H3AP68431 136 aa8.5□□□□□ -1.05
IGHV3-54-201ENST00000622166 GABREP78334 506 aa8.5□□□□□ -1.05
IGHV3-54-201ENST00000622166 SLC35A1P78382 337 aa8.5□□□□□ -1.05
IGHV3-54-201ENST00000622166 IL13RA1P78552 427 aa8.5□□□□□ -1.05
IGHV3-54-201ENST00000622166 CCL7P80098 99 aa8.5□□□□□ -1.05
IGHV3-54-201ENST00000622166 TAF13Q15543 124 aa8.5□□□□□ -1.05
IGHV3-54-201ENST00000622166 SMAD2Q15796 467 aaKnown RBP8.5□□□□□ -1.05
IGHV3-54-201ENST00000622166 HIST2H3PS2Q5TEC6 136 aa8.5□□□□□ -1.05
IGHV3-54-201ENST00000622166 FAM69BQ5VUD6 431 aa8.5□□□□□ -1.05
IGHV3-54-201ENST00000622166 OR52W1Q6IF63 320 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms