RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 RGS19P49795 217 aa10.96□□□□□ -0.66
CIITA-212ENST00000618207 NKPD1Q17RQ9 610 aa10.96□□□□□ -0.66
CIITA-212ENST00000618207 PXDC1Q5TGL8 231 aa10.96□□□□□ -0.66
CIITA-212ENST00000618207 FAM166AQ6J272 317 aa10.96□□□□□ -0.66
CIITA-212ENST00000618207 DEGS2Q6QHC5 323 aa10.96□□□□□ -0.66
CIITA-212ENST00000618207 OR4S1Q8NGB4 309 aa10.96□□□□□ -0.66
CIITA-212ENST00000618207 OR9K2Q8NGE7 335 aa10.96□□□□□ -0.66
CIITA-212ENST00000618207 OR6M1Q8NGM8 313 aa10.96□□□□□ -0.66
CIITA-212ENST00000618207 THRSPQ92748 146 aa10.96□□□□□ -0.66
CIITA-212ENST00000618207 ALKBH3Q96Q83 286 aaPredicted RBP10.96□□□□□ -0.66
CIITA-212ENST00000618207 FANCFQ9NPI8 374 aa10.96□□□□□ -0.66
CIITA-212ENST00000618207 MTFP1Q9UDX5 166 aa10.96□□□□□ -0.66
CIITA-212ENST00000618207 A0A1W2PP11 408 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 ATP6V1G2-DDX39BF2Z307 99 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 ISG15P05161 165 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 LIPCP11150 499 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 H3F3AP84243 136 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 AWAT2Q6E213 333 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 LAMTOR1Q6IAA8 161 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 TMEM81Q6P7N7 255 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 LINC00696Q6ZRV3 163 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 ADGRE4PQ86SQ3 457 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 MEIOBQ8N635 442 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 OR1M1Q8NGA1 313 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 ZNF431Q8TF32 576 aaPredicted RBP10.95□□□□□ -0.66
CIITA-212ENST00000618207 PIGQQ9BRB3 760 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 ULBP2Q9BZM5 246 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 PLA2G3Q9NZ20 509 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 PCSK5Q92824 1860 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 CDX4O14627 284 aaPredicted RBP10.95□□□□□ -0.66
CIITA-212ENST00000618207 PMS2P2O95744 297 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 HCKP08631 526 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 NTF4P34130 210 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 CYB561P49447 251 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 SUCLG1P53597 346 aaKnown RBP10.95□□□□□ -0.66
CIITA-212ENST00000618207 ZP1P60852 638 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 PSMA6P60900 246 aaKnown RBP10.95□□□□□ -0.66
CIITA-212ENST00000618207 SLC22A6Q4U2R8 563 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 ZNF813Q6ZN06 617 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 ANGPTL5Q86XS5 388 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 ZFAND1Q8TCF1 268 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 ZNF845Q96IR2 970 aaPredicted RBP10.95□□□□□ -0.66
CIITA-212ENST00000618207 GPER1Q99527 375 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 BANF2Q9H503 90 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 PLEK2Q9NYT0 353 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 ING4Q9UNL4 249 aa10.95□□□□□ -0.66
CIITA-212ENST00000618207 A0A1B0GTI1 187 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 SIX6O95475 246 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 CD59P13987 128 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 RAB3AP20336 220 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 CARD18P57730 90 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 RAC1P63000 192 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 MRPS10P82664 201 aaKnown RBP10.94□□□□□ -0.66
CIITA-212ENST00000618207 SSPNQ14714 243 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 SCGB2B2Q4G0G5 96 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 TMED4Q7Z7H5 227 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 CD163Q86VB7 1156 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 GVQW1Q8N7I0 195 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 NAXEQ8NCW5 288 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 OR5D14Q8NGL3 314 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 OR2T35Q8NGX2 323 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 PGAM5Q96HS1 289 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 SORCS2Q96PQ0 1159 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 TAAR9Q96RI9 348 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 TINAGL1Q9GZM7 467 aaPredicted RBP10.94□□□□□ -0.66
CIITA-212ENST00000618207 CHST6Q9GZX3 395 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 SH2D2AQ9NP31 389 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 TMEM138Q9NPI0 162 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 LRFN1Q9P244 771 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 KIAA1549Q9HCM3 1950 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 A0A087WZY1 265 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 MEGF11A6BM72 1044 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 NDUFA2O43678 99 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 CYC1P08574 325 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 FSTP19883 344 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 ITGA3P26006 1051 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 ZNF93P35789 620 aaPredicted RBP10.94□□□□□ -0.66
CIITA-212ENST00000618207 CSNK2A1P68400 391 aaPredicted RBP10.94□□□□□ -0.66
CIITA-212ENST00000618207 CD276Q5ZPR3 534 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 DTX1Q86Y01 620 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 NAXDQ8IW45 347 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 ADPRHL1Q8NDY3 354 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 NUDCD2Q8WVJ2 157 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 SEH1LQ96EE3 360 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 SGCZQ96LD1 299 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 NICN1Q9BSH3 213 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 ZFP64Q9NPA5 681 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 PNRC2Q9NPJ4 139 aaKnown RBP10.94□□□□□ -0.66
CIITA-212ENST00000618207 CA10Q9NS85 328 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 MGAT4CQ9UBM8 478 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 MSR1P21757 451 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 CHAF1BQ13112 559 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 C9orf135Q5VTT2 229 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 OR52W1Q6IF63 320 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 STEAP1BQ6NZ63 245 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 DBX2Q6ZNG2 339 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 GALNT16Q8N428 558 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 ZIC4Q8N9L1 334 aa10.94□□□□□ -0.66
CIITA-212ENST00000618207 NAA11Q9BSU3 229 aaPredicted RBP10.94□□□□□ -0.66
CIITA-212ENST00000618207 ACTR6Q9GZN1 396 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms