RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 KRBOX4Q5JUW0 171 aa9.73□□□□□ -0.85
POLR2A-209ENST00000617998 ADGRG5Q8IZF4 528 aa9.73□□□□□ -0.85
POLR2A-209ENST00000617998 RNF6Q9Y252 685 aa9.73□□□□□ -0.85
POLR2A-209ENST00000617998 DICER1Q9UPY3 1922 aaKnown RBP9.73□□□□□ -0.85
POLR2A-209ENST00000617998 NKX2-2O95096 273 aa9.73□□□□□ -0.85
POLR2A-209ENST00000617998 TSEN54Q7Z6J9 526 aaKnown RBP9.73□□□□□ -0.85
POLR2A-209ENST00000617998 PACRGLQ8N7B6 248 aa9.73□□□□□ -0.85
POLR2A-209ENST00000617998 EHFQ9NZC4 300 aa9.73□□□□□ -0.85
POLR2A-209ENST00000617998 NDUFAF4Q9P032 175 aa9.73□□□□□ -0.85
POLR2A-209ENST00000617998 TDRD6O60522 2096 aaKnown RBP9.73□□□□□ -0.85
POLR2A-209ENST00000617998 VSIG10L2P0DP72 767 aa9.73□□□□□ -0.85
POLR2A-209ENST00000617998 RAP2BP61225 183 aa9.73□□□□□ -0.85
POLR2A-209ENST00000617998 SLC35D3Q5M8T2 416 aa9.73□□□□□ -0.85
POLR2A-209ENST00000617998 LPCAT3Q6P1A2 487 aa9.73□□□□□ -0.85
POLR2A-209ENST00000617998 OR4X2Q8NGF9 303 aa9.73□□□□□ -0.85
POLR2A-209ENST00000617998 GON7Q9BXV9 100 aa9.73□□□□□ -0.85
POLR2A-209ENST00000617998 OR5H14A6NHG9 310 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 ZSCAN5BA6NJL1 495 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 OR5H1A6NKK0 313 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 OR2T7P0C7T2 308 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 CD99P14209 185 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 ZNF133P52736 654 aaPredicted RBP9.72□□□□□ -0.85
POLR2A-209ENST00000617998 ZNF367Q7RTV3 350 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 H2BFWTQ7Z2G1 175 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 ADAMTS17Q8TE56 1095 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 TGIF2Q9GZN2 237 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 ACOT13Q9NPJ3 140 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 AK6Q9Y3D8 172 aaKnown RBP9.72□□□□□ -0.85
POLR2A-209ENST00000617998 TMEM30CPA0ZSE6 113 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 GPR37O15354 613 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 ZNF254O75437 659 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 SSX2Q16385 188 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 EIF5AL1Q6IS14 154 aaKnown RBP9.72□□□□□ -0.85
POLR2A-209ENST00000617998 MDP1Q86V88 176 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 SLC25A40Q8TBP6 338 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 RAB3CQ96E17 227 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 SYT11Q9BT88 431 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 GPR84Q9NQS5 396 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 ZNF281Q9Y2X9 895 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 LOC105371242A0A075B767 164 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 SERPINE3A8MV23 424 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 HMGN4O00479 90 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 SYNGR3O43761 229 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 RBPMS2Q6ZRY4 209 aaKnown RBP9.72□□□□□ -0.85
POLR2A-209ENST00000617998 ZNF683Q8IZ20 524 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 TMEM163Q8TC26 289 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 SCN10AQ9Y5Y9 1956 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 XPNPEP2O43895 674 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 SPHARQ15513 63 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 TBPL2Q6SJ96 375 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 GTF2H4Q92759 462 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 SUCNR1Q9BXA5 334 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 BATF3Q9NR55 127 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 TIAF1O95411 115 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 PATE4P0C8F1 98 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 CSN1S1P47710 185 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 CAV2P51636 162 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 YBX1P67809 324 aaKnown RBP9.72□□□□□ -0.85
POLR2A-209ENST00000617998 BCL2A1Q16548 175 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 ZNF788Q6ZQV5 615 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 SLC16A9Q7RTY1 509 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 WDSUB1Q8N9V3 476 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 TSSK2Q96PF2 358 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 A4GNTQ9UNA3 340 aa9.72□□□□□ -0.85
POLR2A-209ENST00000617998 DAOP14920 347 aa9.71□□□□□ -0.85
POLR2A-209ENST00000617998 THBS4P35443 961 aa9.71□□□□□ -0.85
POLR2A-209ENST00000617998 GABRA4P48169 554 aa9.71□□□□□ -0.85
POLR2A-209ENST00000617998 CBLL1Q75N03 491 aa9.71□□□□□ -0.85
POLR2A-209ENST00000617998 LYG1Q8N1E2 194 aa9.71□□□□□ -0.85
POLR2A-209ENST00000617998 CMTM2Q8TAZ6 248 aa9.71□□□□□ -0.85
POLR2A-209ENST00000617998 SLC25A28Q96A46 364 aa9.71□□□□□ -0.85
POLR2A-209ENST00000617998 VWCEQ96DN2 955 aa9.71□□□□□ -0.85
POLR2A-209ENST00000617998 AASSQ9UDR5 926 aa9.71□□□□□ -0.85
POLR2A-209ENST00000617998 ZNF629Q9UEG4 869 aaPredicted RBP9.71□□□□□ -0.85
POLR2A-209ENST00000617998 SLC23A1Q9UHI7 598 aa9.71□□□□□ -0.85
POLR2A-209ENST00000617998 NUP205Q92621 2012 aa9.71□□□□□ -0.85
POLR2A-209ENST00000617998 TYROBPO43914 113 aa9.71□□□□□ -0.85
POLR2A-209ENST00000617998 UBBP0CG47 229 aa9.71□□□□□ -0.85
POLR2A-209ENST00000617998 MYF6P23409 242 aa9.71□□□□□ -0.85
POLR2A-209ENST00000617998 RNLSQ5VYX0 342 aa9.71□□□□□ -0.85
POLR2A-209ENST00000617998 TFAP2EQ6VUC0 442 aa9.71□□□□□ -0.85
POLR2A-209ENST00000617998 UTS2BQ765I0 119 aa9.71□□□□□ -0.85
POLR2A-209ENST00000617998 NUDT15Q9NV35 164 aa9.71□□□□□ -0.85
POLR2A-209ENST00000617998 ATP6V1G2-DDX39BF2Z307 99 aa9.71□□□□□ -0.85
POLR2A-209ENST00000617998 FOXS1O43638 330 aa9.71□□□□□ -0.85
POLR2A-209ENST00000617998 FAM106CPP0CH98 169 aa9.71□□□□□ -0.85
POLR2A-209ENST00000617998 TAS2R46P59540 309 aa9.71□□□□□ -0.85
POLR2A-209ENST00000617998 HNRNPA0Q13151 305 aaKnown RBP9.71□□□□□ -0.85
POLR2A-209ENST00000617998 HYAL4Q2M3T9 481 aa9.71□□□□□ -0.85
POLR2A-209ENST00000617998 SLAMF9Q96A28 289 aa9.71□□□□□ -0.85
POLR2A-209ENST00000617998 GALMQ96C23 342 aa9.71□□□□□ -0.85
POLR2A-209ENST00000617998 DPH3Q96FX2 82 aa9.71□□□□□ -0.85
POLR2A-209ENST00000617998 ANGPTL4Q9BY76 406 aa9.71□□□□□ -0.85
POLR2A-209ENST00000617998 ZFP57Q9NU63 452 aa9.71□□□□□ -0.85
POLR2A-209ENST00000617998 LRP5LA4QPB2 252 aa9.71□□□□□ -0.86
POLR2A-209ENST00000617998 HSD17B6O14756 317 aa9.71□□□□□ -0.86
POLR2A-209ENST00000617998 FUT6P51993 359 aa9.71□□□□□ -0.86
POLR2A-209ENST00000617998 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.71□□□□□ -0.86
POLR2A-209ENST00000617998 KCTD21Q4G0X4 260 aa9.71□□□□□ -0.86
POLR2A-209ENST00000617998 RIPPLY2Q5TAB7 128 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms