RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 A0A1B0GTI1 187 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 TRDV1A0A1B0GX56 115 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 WIPF3A6NGB9 483 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 H3BSH0 61 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 AIREO43918 545 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 SC5DO75845 299 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 GABARAPO95166 117 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 SERPINA3P01011 423 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 NGFP01138 241 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 HLA-DPB1P04440 258 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 CCL1P22362 96 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 NR4A1P22736 598 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 CALCRP30988 508 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 FGF9P31371 208 aaPredicted RBP6.97□□□□□ -1.29
TARDBP-219ENST00000617757 MAGEB1P43366 347 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 TMBIM6P55061 237 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 SNTB1Q13884 538 aaKnown RBP6.97□□□□□ -1.29
TARDBP-219ENST00000617757 GFOD2Q3B7J2 385 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 TIMM50Q3ZCQ8 353 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 GLYATL3Q5SZD4 288 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 FOXB2Q5VYV0 432 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 UNQ9370/PRO34162Q6UXP9 181 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 WFDC8Q8IUA0 241 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 ZNF101Q8IZC7 436 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 OR51A4Q8NGJ6 313 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 OR13C5Q8NGS8 318 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 OR10AC1Q8NH08 325 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 OR2AE1Q8NHA4 323 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 ZNF420Q8TAQ5 688 aaPredicted RBP6.97□□□□□ -1.29
TARDBP-219ENST00000617757 LINC01560Q8TB33 94 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 OR51E1Q8TCB6 317 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 LYZL4Q96KX0 146 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 CHCHD6Q9BRQ6 235 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 MED18Q9BUE0 208 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 OR10A2Q9H208 303 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 POFUT1Q9H488 388 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 GPR84Q9NQS5 396 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 NPDC1Q9NQX5 325 aaPredicted RBP6.97□□□□□ -1.29
TARDBP-219ENST00000617757 TBCCD1Q9NVR7 557 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 TXNL4BQ9NX01 149 aaKnown RBP6.97□□□□□ -1.29
TARDBP-219ENST00000617757 NDRG3Q9UGV2 375 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 SSR3Q9UNL2 185 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 STARD10Q9Y365 291 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 ZFYVE26Q68DK2 2539 aa6.97□□□□□ -1.29
TARDBP-219ENST00000617757 IGHV2OR16-5A0A0B4J2B6 119 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 TRBV5-5A0A0J9YX44 114 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 LOC100506127A0A0U1RQW1 187 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 A0A1B0GVI7 797 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 LOC107986453A0A1B0GWG9 222 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 DPRXA6NFQ7 191 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 CCDC160A6NGH7 325 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 ZNF879B4DU55 563 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 J3QW42 95 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 GABRPO00591 440 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 XRCC2O43543 280 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 SYT7O43581 403 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 LMX1BO60663 402 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 SMPD2O60906 423 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 RGS9O75916 674 aaPredicted RBP6.96□□□□□ -1.3
TARDBP-219ENST00000617757 ATE1O95260 518 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 EPXP11678 715 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 GALP22466 123 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 PTAFRP25105 342 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 CD40P25942 277 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 PCSK6P29122 969 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 TGFBR1P36897 503 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 UCP2P55851 309 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 LSM3P62310 102 aaKnown RBP6.96□□□□□ -1.3
TARDBP-219ENST00000617757 FAM3AP98173 230 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 NAAAQ02083 359 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 ZNF92Q03936 586 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 SRSF1Q07955 248 aaKnown RBP eCLIP6.96□□□□□ -1.32e-13■■□□□ 11.9
TARDBP-219ENST00000617757 INSL4Q14641 139 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 CTF1Q16619 201 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 Q499Y3 187 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 ACSM3Q53FZ2 586 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 ZMAT1Q5H9K5 638 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 GDPGP1Q6ZNW5 385 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 Q6ZSR3 168 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 RFPL4BQ6ZWI9 263 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 DOK3Q7L591 496 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 CEACAM19Q7Z692 300 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 PLPP7Q8NBV4 271 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 OR1J1Q8NGS3 322 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 GPR148Q8TDV2 347 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 RAB2BQ8WUD1 216 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 SPSB4Q96A44 273 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 REEP6Q96HR9 211 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 OR14A2Q96R54 314 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 KCNS3Q9BQ31 491 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 BCL7BQ9BQE9 202 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 CENPOQ9BU64 300 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 OR51B6Q9H340 312 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 RNF167Q9H6Y7 350 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 EXOSC4Q9NPD3 245 aaKnown RBP6.96□□□□□ -1.3
TARDBP-219ENST00000617757 NGBQ9NPG2 151 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 PTTG3PQ9NZH4 202 aa6.96□□□□□ -1.3
TARDBP-219ENST00000617757 EIF3KQ9UBQ5 218 aaKnown RBP6.96□□□□□ -1.3
TARDBP-219ENST00000617757 RSL24D1Q9UHA3 163 aaKnown RBP6.96□□□□□ -1.3
TARDBP-219ENST00000617757 ZNF391Q9UJN7 358 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms