RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 FAUP35544 74 aaKnown RBP12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 SLC36A1Q7Z2H8 476 aa12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 OR2G2Q8NGZ5 317 aa12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 WDR77Q9BQA1 342 aaPredicted RBP12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 A8MVM7 634 aa12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 MGMTP16455 207 aa12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 HAAOP46952 286 aa12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 POLR2HP52434 150 aaKnown RBP12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 PPIAP62937 165 aaKnown RBP12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 SGCAQ16586 387 aa12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 PLEKHN1Q494U1 663 aaPredicted RBP12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 WDR38Q5JTN6 314 aa12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 C9orf135Q5VTT2 229 aa12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 SLC16A9Q7RTY1 509 aa12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 OVCH1Q7RTY7 1134 aa12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 B3GALT1Q9Y5Z6 326 aa12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 PRSS37A4D1T9 235 aa12.91□□□□□ -0.34
SHROOM1-208ENST00000617339 H3BMH7 237 aa12.91□□□□□ -0.34
SHROOM1-208ENST00000617339 TP53I11O14683 189 aa12.91□□□□□ -0.34
SHROOM1-208ENST00000617339 OR2T1O43869 369 aa12.91□□□□□ -0.34
SHROOM1-208ENST00000617339 CCNOP22674 350 aa12.91□□□□□ -0.34
SHROOM1-208ENST00000617339 S100A12P80511 92 aa12.91□□□□□ -0.34
SHROOM1-208ENST00000617339 MFGE8Q08431 387 aaPredicted RBP12.91□□□□□ -0.34
SHROOM1-208ENST00000617339 DCAF12Q5T6F0 453 aa12.91□□□□□ -0.34
SHROOM1-208ENST00000617339 FNDC7Q5VTL7 733 aa12.91□□□□□ -0.34
SHROOM1-208ENST00000617339 RHBDD2Q6NTF9 364 aa12.91□□□□□ -0.34
SHROOM1-208ENST00000617339 STAC2Q6ZMT1 411 aa12.91□□□□□ -0.34
SHROOM1-208ENST00000617339 GSN-AS1Q9NRJ2 163 aa12.91□□□□□ -0.34
SHROOM1-208ENST00000617339 P2RY10O00398 339 aa12.91□□□□□ -0.34
SHROOM1-208ENST00000617339 AGPAT2O15120 278 aa12.91□□□□□ -0.34
SHROOM1-208ENST00000617339 ITGA10O75578 1167 aa12.91□□□□□ -0.34
SHROOM1-208ENST00000617339 FOSL1P15407 271 aa12.91□□□□□ -0.34
SHROOM1-208ENST00000617339 EFNB2P52799 333 aa12.91□□□□□ -0.34
SHROOM1-208ENST00000617339 RPL27P61353 136 aaKnown RBP12.91□□□□□ -0.34
SHROOM1-208ENST00000617339 SNTB1Q13884 538 aaKnown RBP12.91□□□□□ -0.34
SHROOM1-208ENST00000617339 SMCO1Q147U7 214 aa12.91□□□□□ -0.34
SHROOM1-208ENST00000617339 OLFML2AQ68BL7 652 aa12.91□□□□□ -0.34
SHROOM1-208ENST00000617339 LURAP1LQ8IV03 231 aa12.91□□□□□ -0.34
SHROOM1-208ENST00000617339 FAM219AQ8IW50 185 aa12.91□□□□□ -0.34
SHROOM1-208ENST00000617339 EDEM2Q9BV94 578 aa12.91□□□□□ -0.34
SHROOM1-208ENST00000617339 PLEKHA1Q9HB21 404 aa12.91□□□□□ -0.34
SHROOM1-208ENST00000617339 INPP5EQ9NRR6 644 aa12.91□□□□□ -0.34
SHROOM1-208ENST00000617339 AKAP6Q13023 2319 aa12.91□□□□□ -0.34
SHROOM1-208ENST00000617339 NBEAQ8NFP9 2946 aa12.91□□□□□ -0.34
SHROOM1-208ENST00000617339 OR5H14A6NHG9 310 aa12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 RFPL4AA6NLU0 287 aa12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 RFPL4AL1F8VTS6 287 aa12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 RPA2P15927 270 aa12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 ADRA2CP18825 462 aa12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 MFAP5Q13361 173 aa12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 CPEB2Q7Z5Q1 589 aaKnown RBP12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 OR51A2Q8NGJ7 313 aa12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 OR14L1PQ8NHC6 308 aa12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 SAP25Q8TEE9 199 aa12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 GLYATL2Q8WU03 294 aa12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 MVB12AQ96EY5 273 aa12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 SPSB2Q99619 263 aa12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 ABHD6Q9BV23 337 aa12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 ZNF629Q9UEG4 869 aaPredicted RBP12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 ADAMTS9Q9P2N4 1935 aa12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 PNLIPRP2P54317 469 aa12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 COL19A1Q14993 1142 aa12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 GRINAQ7Z429 371 aa12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 LRRC18Q8N456 261 aa12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 BARX1Q9HBU1 254 aaPredicted RBP12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 LOXL2Q9Y4K0 774 aa12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 BGLAPP02818 100 aa12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 SLC6A8P48029 635 aa12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 RPS4XP62701 263 aaKnown RBP12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 NKPD1Q17RQ9 610 aa12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 TMEM205Q6UW68 189 aa12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 PRSS35Q8N3Z0 413 aa12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 DTWD2Q8NBA8 298 aa12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 OR10R2Q8NGX6 335 aa12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 CASTOR1Q8WTX7 329 aa12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 JAM3Q9BX67 310 aa12.9□□□□□ -0.34
SHROOM1-208ENST00000617339 HOXB1P14653 301 aaPredicted RBP12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 ALOX5APP20292 161 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 ETV3LQ6ZN32 361 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 PMM1Q92871 262 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 TWSG1Q9GZX9 223 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 ADAM19Q9H013 955 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 CEP295Q9C0D2 2601 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 TMEM269A0A1B0GVZ9 245 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 EEF1E1-BLOC1S5C9J1V9 151 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 ACTL6AO96019 429 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 CD53P19397 219 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 DNASE1L1P49184 302 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 Q499Y3 187 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 MOB3CQ70IA8 216 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 GTPBP8Q8N3Z3 284 aaPredicted RBP12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 CHST4Q8NCG5 386 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 OR1J2Q8NGS2 313 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 ATG5Q9H1Y0 275 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 PIGMQ9H3S5 423 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 MRPL22Q9NWU5 206 aaKnown RBP12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 HAO2Q9NYQ3 351 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 MYOTQ9UBF9 498 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 OGG1O15527 345 aa12.89□□□□□ -0.35
SHROOM1-208ENST00000617339 UPK3AO75631 287 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms