RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 FAM219BQ5XKK7 198 aa16.92■□□□□ 0.3
GABPB1-212ENST00000615671 TMUB2Q71RG4 321 aa16.92■□□□□ 0.3
GABPB1-212ENST00000615671 TMEM231Q9H6L2 316 aa16.92■□□□□ 0.3
GABPB1-212ENST00000615671 A4GNTQ9UNA3 340 aa16.92■□□□□ 0.3
GABPB1-212ENST00000615671 MYO18AQ92614 2054 aaKnown RBP16.92■□□□□ 0.3
GABPB1-212ENST00000615671 PMS2P2O95744 297 aa16.92■□□□□ 0.3
GABPB1-212ENST00000615671 CRYABP02511 175 aaKnown RBP16.92■□□□□ 0.3
GABPB1-212ENST00000615671 PMP22Q01453 160 aa16.92■□□□□ 0.3
GABPB1-212ENST00000615671 DTWD2Q8NBA8 298 aa16.92■□□□□ 0.3
GABPB1-212ENST00000615671 GAL3ST2Q9H3Q3 398 aa16.92■□□□□ 0.3
GABPB1-212ENST00000615671 FBXL4Q9UKA2 621 aa16.92■□□□□ 0.3
GABPB1-212ENST00000615671 SMIM17P0DL12 118 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 DFFBO76075 338 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 VAMP5O95183 116 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 ELFN2Q5R3F8 820 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 PTRH1Q86Y79 214 aaKnown RBP16.91■□□□□ 0.3
GABPB1-212ENST00000615671 CMTM4Q8IZR5 234 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 ARIH2OSQ8N7S6 290 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 PSENENQ9NZ42 101 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 ST3GAL6Q9Y274 331 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 XRCC2O43543 280 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 HYAL3O43820 417 aaPredicted RBP16.91■□□□□ 0.3
GABPB1-212ENST00000615671 ARNTP27540 789 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 SPINK9Q5DT21 86 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 SSX7Q7RTT5 188 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 OR2T6Q8NHC8 308 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 ERGIC1Q969X5 290 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 SEH1LQ96EE3 360 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 OPN1MWP04001 364 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 OPN1MW2P0DN77 364 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 OPN1MW3P0DN78 364 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 FAHP16930 419 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 FCRL6Q6DN72 434 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 RHOXF1Q8NHV9 184 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 RPUSD4Q96CM3 377 aaKnown RBP16.91■□□□□ 0.3
GABPB1-212ENST00000615671 SLCO1C1Q9NYB5 712 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 METTL12A8MUP2 240 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 UPK1AO00322 258 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 LYZL6O75951 148 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 RRASP10301 218 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 RPS19P39019 145 aaKnown RBP16.91■□□□□ 0.3
GABPB1-212ENST00000615671 TAGLNQ01995 201 aaKnown RBP16.91■□□□□ 0.3
GABPB1-212ENST00000615671 PSD2Q9BQI7 771 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 NUDT9Q9BW91 350 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 S1PR5Q9H228 398 aa16.91■□□□□ 0.3
GABPB1-212ENST00000615671 TRGV10A0A0A0MS01 117 aa16.9■□□□□ 0.3
GABPB1-212ENST00000615671 METTL15P1P0C7V9 234 aa16.9■□□□□ 0.3
GABPB1-212ENST00000615671 HRH1P35367 487 aa16.9■□□□□ 0.3
GABPB1-212ENST00000615671 SNRPNP63162 240 aaKnown RBP16.9■□□□□ 0.3
GABPB1-212ENST00000615671 C1orf210Q8IVY1 113 aa16.9■□□□□ 0.3
GABPB1-212ENST00000615671 OR10P1Q8NGE3 313 aa16.9■□□□□ 0.3
GABPB1-212ENST00000615671 DUSP8Q13202 625 aa16.9■□□□□ 0.3
GABPB1-212ENST00000615671 GALNT16Q8N428 558 aa16.9■□□□□ 0.3
GABPB1-212ENST00000615671 OCEL1Q9H607 264 aa16.9■□□□□ 0.3
GABPB1-212ENST00000615671 FRG2CA6NGY1 282 aa16.9■□□□□ 0.3
GABPB1-212ENST00000615671 CBR3O75828 277 aa16.9■□□□□ 0.3
GABPB1-212ENST00000615671 IL9P15248 144 aa16.9■□□□□ 0.3
GABPB1-212ENST00000615671 TRIP6Q15654 476 aaKnown RBP16.9■□□□□ 0.3
GABPB1-212ENST00000615671 PCK2Q16822 640 aa16.9■□□□□ 0.3
GABPB1-212ENST00000615671 DBX1A6NMT0 343 aa16.9■□□□□ 0.3
GABPB1-212ENST00000615671 ANGPTL7O43827 346 aa16.9■□□□□ 0.3
GABPB1-212ENST00000615671 ZNF90Q03938 601 aa16.9■□□□□ 0.3
GABPB1-212ENST00000615671 ISG20L2Q9H9L3 353 aaKnown RBP16.9■□□□□ 0.3
GABPB1-212ENST00000615671 FAM157AC9JC47 383 aa16.9■□□□□ 0.3
GABPB1-212ENST00000615671 DSCR4P56555 118 aaPredicted RBP16.9■□□□□ 0.3
GABPB1-212ENST00000615671 DGCR2P98153 550 aa16.9■□□□□ 0.3
GABPB1-212ENST00000615671 FUNDC1Q8IVP5 155 aa16.9■□□□□ 0.3
GABPB1-212ENST00000615671 LYSMD1Q96S90 227 aa16.9■□□□□ 0.3
GABPB1-212ENST00000615671 ACER3Q9NUN7 267 aa16.9■□□□□ 0.3
GABPB1-212ENST00000615671 LIN7CQ9NUP9 197 aaKnown RBP16.9■□□□□ 0.3
GABPB1-212ENST00000615671 YBX2Q9Y2T7 364 aaKnown RBP16.9■□□□□ 0.3
GABPB1-212ENST00000615671 MN1Q10571 1320 aaPredicted RBP16.89■□□□□ 0.3
GABPB1-212ENST00000615671 URB1O60287 2271 aaKnown RBP16.89■□□□□ 0.29
GABPB1-212ENST00000615671 H2AFB1P0C5Y9 115 aa16.89■□□□□ 0.29
GABPB1-212ENST00000615671 DBPQ10586 325 aaPredicted RBP16.89■□□□□ 0.29
GABPB1-212ENST00000615671 OR52N1Q8NH53 320 aa16.89■□□□□ 0.29
GABPB1-212ENST00000615671 FGF7P21781 194 aa16.89■□□□□ 0.29
GABPB1-212ENST00000615671 RAB1AP62820 205 aa16.89■□□□□ 0.29
GABPB1-212ENST00000615671 DDX60Q8IY21 1712 aaKnown RBP16.89■□□□□ 0.29
GABPB1-212ENST00000615671 ARHGEF39Q8N4T4 335 aa16.89■□□□□ 0.29
GABPB1-212ENST00000615671 NANOGP1Q8N7R0 232 aa16.89■□□□□ 0.29
GABPB1-212ENST00000615671 TOPAZ1Q8N9V7 1692 aa16.89■□□□□ 0.29
GABPB1-212ENST00000615671 GATA6Q92908 595 aa16.89■□□□□ 0.29
GABPB1-212ENST00000615671 MRGPRX4Q96LA9 322 aa16.89■□□□□ 0.29
GABPB1-212ENST00000615671 B3GALNT1O75752 331 aa16.89■□□□□ 0.29
GABPB1-212ENST00000615671 ETHE1O95571 254 aa16.89■□□□□ 0.29
GABPB1-212ENST00000615671 FKBP2P26885 142 aaKnown RBP16.89■□□□□ 0.29
GABPB1-212ENST00000615671 GSG1Q2KHT4 349 aa16.89■□□□□ 0.29
GABPB1-212ENST00000615671 HES3Q5TGS1 186 aa16.89■□□□□ 0.29
GABPB1-212ENST00000615671 OR13C8Q8NGS7 320 aa16.89■□□□□ 0.29
GABPB1-212ENST00000615671 SLC35B4Q969S0 331 aa16.89■□□□□ 0.29
GABPB1-212ENST00000615671 C3AR1Q16581 482 aa16.89■□□□□ 0.29
GABPB1-212ENST00000615671 ACOT7LQ6ZUV0 252 aa16.89■□□□□ 0.29
GABPB1-212ENST00000615671 P4HTMQ9NXG6 502 aa16.89■□□□□ 0.29
GABPB1-212ENST00000615671 FLVCR2Q9UPI3 526 aa16.89■□□□□ 0.29
GABPB1-212ENST00000615671 TRDV1A0A1B0GX56 115 aa16.88■□□□□ 0.29
GABPB1-212ENST00000615671 LRP3O75074 770 aa16.88■□□□□ 0.29
GABPB1-212ENST00000615671 BPIFB3P59826 476 aa16.88■□□□□ 0.29
GABPB1-212ENST00000615671 KMT5CQ86Y97 462 aa16.88■□□□□ 0.29
GABPB1-212ENST00000615671 C16orf47Q6ZP98 133 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms