RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 SCN5AQ14524 2016 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 FITM1A5D6W6 292 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 K7ESF4 209 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 ABCD4O14678 606 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 TERTO14746 1132 aaKnown RBP8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 PRICKLE3O43900 615 aaPredicted RBP8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 PMS2P2O95744 297 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 IFNA2P01563 188 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 MFGE8Q08431 387 aaPredicted RBP8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 SMIM21Q3B7S5 101 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 PDZD9Q8IXQ8 264 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 PRSS35Q8N3Z0 413 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 DEDD2Q8WXF8 326 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 DCUN1D4Q92564 292 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 SGK3Q96BR1 496 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 SNX18Q96RF0 628 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 FN3KRPQ9HA64 309 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 CROCCQ5TZA2 2017 aa8.45□□□□□ -1.06
CLTCL1-208ENST00000615606 NKX2-8O15522 239 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 TMEM127O75204 238 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 PSMB1P20618 241 aaKnown RBP8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 CD96P40200 585 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 MAFIPQ8WZ33 124 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 TMEM68Q96MH6 324 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 MOGAT1Q96PD6 335 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 FLRT3Q9NZU0 649 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 CHST2Q9Y4C5 530 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 BTBD17A6NE02 478 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 AIPO00170 330 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 PAHP00439 452 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 ZNF32P17041 273 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 PCSK6P29122 969 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 RPS19P39019 145 aaKnown RBP8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 HAAOP46952 286 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 PABPC1L2AQ5JQF8 200 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 OTPQ5XKR4 325 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 LYPD4Q6UWN0 246 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 SMAP2Q8WU79 429 aaPredicted RBP8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 ASB5Q8WWX0 329 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 SLC25A31Q9H0C2 315 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 SLCO1B1Q9Y6L6 691 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 TUSC2O75896 110 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 LYZL6O75951 148 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 HOXD4P09016 255 aaPredicted RBP8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 OR8U9P0C7N5 309 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 ATF1P18846 271 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 ZNF136P52737 540 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 S100A7AQ86SG5 101 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 ZAR1Q86SH2 424 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 ADGRG3Q86Y34 549 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 TTTY12Q9BZ98 90 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 EIF5A2Q9GZV4 153 aaKnown RBP8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 C1orf123Q9NWV4 160 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 FBXL2Q9UKC9 423 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 ICAM5Q9UMF0 924 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 UNC13CQ8NB66 2214 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 AQP7P3A6NL99 342 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 SLC9A3R2Q15599 337 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 SPATA46Q5T0L3 261 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 AKR1C8PQ5T2L2 129 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 SLC25A26Q70HW3 274 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 NPEPL1Q8NDH3 523 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 OR10K1Q8NGX5 313 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 OR10J5Q8NHC4 309 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 SPSB1Q96BD6 273 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 OR2M2Q96R28 347 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 HRASLSQ9HDD0 168 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 UGT2A1Q9Y4X1 527 aa8.44□□□□□ -1.06
CLTCL1-208ENST00000615606 HYAL3O43820 417 aaPredicted RBP8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 S100A7P31151 101 aa8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 KRTCAP3Q53RY4 240 aa8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 ZNF767PQ75MW2 155 aa8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 ASB10Q8WXI3 467 aa8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 PLEKHA3Q9HB20 300 aa8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 HS3ST3B1Q9Y662 390 aa8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 OR6C68A6NDL8 312 aa8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 SIRPB1O00241 398 aa8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 GPX5O75715 221 aa8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 APOA2P02652 100 aa8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 HOXB5P09067 269 aa8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 NFYAP23511 347 aaPredicted RBP8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 APEX1P27695 318 aaKnown RBP8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 SNCAP37840 140 aa8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 GP2P55259 537 aaKnown RBP8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 ZNF616Q08AN1 781 aa8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 LCN10Q6JVE6 187 aa8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 BHLHA15Q7RTS1 189 aaPredicted RBP8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 RIMS4Q9H426 269 aaPredicted RBP8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 ZMAT3Q9HA38 289 aaKnown RBP8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 DTX4Q9Y2E6 619 aa8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 MRPS18BQ9Y676 258 aaKnown RBP8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 TO15178 435 aa8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 EFSO43281 561 aa8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 SSX5O60225 188 aa8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 SMIM10L1P0DMW3 83 aa8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 FAHP16930 419 aa8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 TUBG1P23258 451 aa8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 CDKN2AP42771 156 aaKnown RBP8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 STAC2Q6ZMT1 411 aa8.43□□□□□ -1.06
CLTCL1-208ENST00000615606 Q8IYB0 196 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms