RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 TNFRSF13CQ96RJ3 184 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 CCDC86Q9H6F5 360 aaKnown RBP11.69□□□□□ -0.54
FOXN3-219ENST00000615335 MYOZ1Q9NP98 299 aaPredicted RBP11.69□□□□□ -0.54
FOXN3-219ENST00000615335 LHX6Q9UPM6 363 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 HS3ST3B1Q9Y662 390 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 TRAV1-2A0A0B4J238 106 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 MKRN2OSH3BPM6 223 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 IGHEP01854 428 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 MAGEB1P43366 347 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 F2RL1P55085 397 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 RAC1P63000 192 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 PSG6Q00889 435 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 RBM39Q14498 530 aaKnown RBP11.69□□□□□ -0.54
FOXN3-219ENST00000615335 TGIF1Q15583 401 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 NNATQ16517 81 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 C2orf68Q2NKX9 166 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 CYB5R2Q6BCY4 276 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 ARHGAP11AQ6P4F7 1023 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 ACOT7LQ6ZUV0 252 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 DTX1Q86Y01 620 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 ZNF614Q8N883 585 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 OR13C5Q8NGS8 318 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 OR52I2Q8NH67 350 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 GAL3ST4Q96RP7 486 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 MFRPQ9BY79 579 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 WDR13Q9H1Z4 485 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 TAS2R10Q9NYW0 307 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 ST6GALNAC2Q9UJ37 374 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 KLK13Q9UKR3 277 aa11.69□□□□□ -0.54
FOXN3-219ENST00000615335 AKAP13Q12802 2813 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 LOC102723996A0A087X1L8 192 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 A0A0B4J2E0 115 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 A0A1B0GWA3 101 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 A0A1B0GX12 115 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 PRKNO60260 465 aaPredicted RBP11.68□□□□□ -0.54
FOXN3-219ENST00000615335 DXOO77932 396 aaKnown RBP11.68□□□□□ -0.54
FOXN3-219ENST00000615335 VSIG10L2P0DP72 767 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 SNRPBP14678 240 aaKnown RBP11.68□□□□□ -0.54
FOXN3-219ENST00000615335 SPINK2P20155 84 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 PLAURQ03405 335 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 RTP5Q14D33 572 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 PLEKHN1Q494U1 663 aaPredicted RBP11.68□□□□□ -0.54
FOXN3-219ENST00000615335 NCMAPQ5T1S8 102 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 KIRREL2Q6UWL6 708 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 ZAR1Q86SH2 424 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 OR4A4PQ8NGN8 299 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 PIGQQ9BRB3 760 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 LMF2Q9BU23 707 aaKnown RBP11.68□□□□□ -0.54
FOXN3-219ENST00000615335 RSRP1Q9BUV0 290 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 BCO1Q9HAY6 547 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 FLRT3Q9NZU0 649 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 MRPS18BQ9Y676 258 aaKnown RBP11.68□□□□□ -0.54
FOXN3-219ENST00000615335 IGHV1-45A0A0A0MS14 117 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 H7C1Q1 480 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 PYCARD-AS1I3L0S3 204 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 ADAM10O14672 748 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 FADS1O60427 444 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 NKX2-2O95096 273 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 MAP3K8P41279 467 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 SRSF3P84103 164 aaKnown RBP11.68□□□□□ -0.54
FOXN3-219ENST00000615335 USF2Q15853 346 aaPredicted RBP11.68□□□□□ -0.54
FOXN3-219ENST00000615335 TP53I3Q53FA7 332 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 HLA-DQA1Q5Y7H0 255 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 NSUN5P2Q63ZY6 315 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 MTFR2Q6P444 385 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 C9orf40Q8IXQ3 194 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 APCDD1LQ8NCL9 501 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 NFAM1Q8NET5 270 aaPredicted RBP11.68□□□□□ -0.54
FOXN3-219ENST00000615335 TTTY10Q9BZA0 68 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 Q9N2J8 555 aa11.68□□□□□ -0.54
FOXN3-219ENST00000615335 OR2AT4A6NND4 320 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 TMEM127O75204 238 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 MED6O75586 246 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 CT45A8P0DMV1 189 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 CT45A9P0DMV2 189 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 LIPCP11150 499 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 COX6A1P12074 109 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 EDN3P14138 238 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 ATF1P18846 271 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 SLC26A5P58743 744 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 PCOLCEQ15113 449 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 CT45A2Q5DJT8 189 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 LPCAT3Q6P1A2 487 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 BEST3Q8N1M1 668 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 OR4N2Q8NGD1 307 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 OR52E2Q8NGJ4 325 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 SVIPQ8NHG7 77 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 PAQR8Q8TEZ7 354 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 ZMYND19Q96E35 227 aaPredicted RBP11.67□□□□□ -0.54
FOXN3-219ENST00000615335 SMAD5Q99717 465 aaKnown RBP11.67□□□□□ -0.54
FOXN3-219ENST00000615335 SCNM1Q9BWG6 230 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 COMMD9Q9P000 198 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 IL17BQ9UHF5 180 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 NSG1A0A0A6YYJ2 146 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 A0A1W2PPK0 400 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 CDC14CA4D256 554 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 F5H0A9 414 aaPredicted RBP11.67□□□□□ -0.54
FOXN3-219ENST00000615335 OGG1O15527 345 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 NR2C1P13056 603 aa11.67□□□□□ -0.54
FOXN3-219ENST00000615335 ACKR3P25106 362 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms