RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 SPERTQ8NA61 448 aa10.45□□□□□ -0.74
CBWD3-208ENST00000612050 THEM6Q8WUY1 208 aa10.45□□□□□ -0.74
CBWD3-208ENST00000612050 ERGIC1Q969X5 290 aa10.45□□□□□ -0.74
CBWD3-208ENST00000612050 TMEM186Q96B77 213 aa10.45□□□□□ -0.74
CBWD3-208ENST00000612050 C1orf159Q96HA4 380 aa10.45□□□□□ -0.74
CBWD3-208ENST00000612050 SLC30A2Q9BRI3 323 aa10.45□□□□□ -0.74
CBWD3-208ENST00000612050 OSBPL10Q9BXB5 764 aa10.45□□□□□ -0.74
CBWD3-208ENST00000612050 NIPAL2Q9H841 368 aa10.45□□□□□ -0.74
CBWD3-208ENST00000612050 MED20Q9H944 212 aa10.45□□□□□ -0.74
CBWD3-208ENST00000612050 LPAR2Q9HBW0 351 aa10.45□□□□□ -0.74
CBWD3-208ENST00000612050 PNRC2Q9NPJ4 139 aaKnown RBP10.45□□□□□ -0.74
CBWD3-208ENST00000612050 LAMP5Q9UJQ1 280 aa10.45□□□□□ -0.74
CBWD3-208ENST00000612050 TMEM14AQ9Y6G1 99 aa10.45□□□□□ -0.74
CBWD3-208ENST00000612050 TANC2Q9HCD6 1990 aa10.45□□□□□ -0.74
CBWD3-208ENST00000612050 SETD2Q9BYW2 2564 aaPredicted RBP10.45□□□□□ -0.74
CBWD3-208ENST00000612050 CSPG4Q6UVK1 2322 aa10.45□□□□□ -0.74
CBWD3-208ENST00000612050 RTTNQ86VV8 2226 aa10.44□□□□□ -0.74
CBWD3-208ENST00000612050 A0A0G2JMP0 313 aa10.44□□□□□ -0.74
CBWD3-208ENST00000612050 A0A0X1KG70 313 aa10.44□□□□□ -0.74
CBWD3-208ENST00000612050 GMDSO60547 372 aa10.44□□□□□ -0.74
CBWD3-208ENST00000612050 FOXH1O75593 365 aa10.44□□□□□ -0.74
CBWD3-208ENST00000612050 GATA3P23771 443 aa10.44□□□□□ -0.74
CBWD3-208ENST00000612050 ACTR3P61158 418 aa10.44□□□□□ -0.74
CBWD3-208ENST00000612050 KRTAP27-1Q3LI81 207 aa10.44□□□□□ -0.74
CBWD3-208ENST00000612050 FAHD1Q6P587 224 aa10.44□□□□□ -0.74
CBWD3-208ENST00000612050 LYPD4Q6UWN0 246 aa10.44□□□□□ -0.74
CBWD3-208ENST00000612050 KRT77Q7Z794 578 aa10.44□□□□□ -0.74
CBWD3-208ENST00000612050 KLBQ86Z14 1044 aa10.44□□□□□ -0.74
CBWD3-208ENST00000612050 CELF2-AS1Q8N7Q2 184 aa10.44□□□□□ -0.74
CBWD3-208ENST00000612050 OR4M2Q8NGB6 313 aa10.44□□□□□ -0.74
CBWD3-208ENST00000612050 OR10AD1Q8NGE0 317 aa10.44□□□□□ -0.74
CBWD3-208ENST00000612050 UTP4Q969X6 686 aaKnown RBP10.44□□□□□ -0.74
CBWD3-208ENST00000612050 ZMYND19Q96E35 227 aaPredicted RBP10.44□□□□□ -0.74
CBWD3-208ENST00000612050 PGAM5Q96HS1 289 aa10.44□□□□□ -0.74
CBWD3-208ENST00000612050 MEGF10Q96KG7 1140 aa10.44□□□□□ -0.74
CBWD3-208ENST00000612050 ABHD6Q9BV23 337 aa10.44□□□□□ -0.74
CBWD3-208ENST00000612050 OR10A2Q9H208 303 aa10.44□□□□□ -0.74
CBWD3-208ENST00000612050 C14orf119Q9NWQ9 140 aa10.44□□□□□ -0.74
CBWD3-208ENST00000612050 HIF1ANQ9NWT6 349 aa10.44□□□□□ -0.74
CBWD3-208ENST00000612050 CACNG2Q9Y698 323 aa10.44□□□□□ -0.74
CBWD3-208ENST00000612050 DYSFO75923 2080 aa10.43□□□□□ -0.74
CBWD3-208ENST00000612050 GPR37O15354 613 aa10.43□□□□□ -0.74
CBWD3-208ENST00000612050 CPT2P23786 658 aa10.43□□□□□ -0.74
CBWD3-208ENST00000612050 OTX1P32242 354 aaPredicted RBP10.43□□□□□ -0.74
CBWD3-208ENST00000612050 GNALP38405 381 aa10.43□□□□□ -0.74
CBWD3-208ENST00000612050 MDH2P40926 338 aaKnown RBP10.43□□□□□ -0.74
CBWD3-208ENST00000612050 BTG1P62324 171 aa10.43□□□□□ -0.74
CBWD3-208ENST00000612050 DBPQ10586 325 aaPredicted RBP10.43□□□□□ -0.74
CBWD3-208ENST00000612050 APOFQ13790 326 aa10.43□□□□□ -0.74
CBWD3-208ENST00000612050 PTGES3Q15185 160 aaKnown RBP10.43□□□□□ -0.74
CBWD3-208ENST00000612050 KCNJ8Q15842 424 aa10.43□□□□□ -0.74
CBWD3-208ENST00000612050 TMEM155Q4W5P6 130 aa10.43□□□□□ -0.74
CBWD3-208ENST00000612050 LINC01590Q5TEZ4 76 aa10.43□□□□□ -0.74
CBWD3-208ENST00000612050 ZFP1Q6P2D0 407 aa10.43□□□□□ -0.74
CBWD3-208ENST00000612050 Q6ZR03 302 aa10.43□□□□□ -0.74
CBWD3-208ENST00000612050 NAA40Q86UY6 237 aa10.43□□□□□ -0.74
CBWD3-208ENST00000612050 OR8S1Q8NH09 359 aa10.43□□□□□ -0.74
CBWD3-208ENST00000612050 OTOSQ8NHW6 89 aa10.43□□□□□ -0.74
CBWD3-208ENST00000612050 RNF133Q8WVZ7 376 aa10.43□□□□□ -0.74
CBWD3-208ENST00000612050 ZNRF4Q8WWF5 429 aa10.43□□□□□ -0.74
CBWD3-208ENST00000612050 DUS3LQ96G46 650 aaKnown RBP10.43□□□□□ -0.74
CBWD3-208ENST00000612050 CENPNQ96H22 339 aaPredicted RBP10.43□□□□□ -0.74
CBWD3-208ENST00000612050 RAB3IPQ96QF0 476 aaPredicted RBP10.43□□□□□ -0.74
CBWD3-208ENST00000612050 ADAT1Q9BUB4 502 aaKnown RBP10.43□□□□□ -0.74
CBWD3-208ENST00000612050 RGCCQ9H4X1 137 aa10.43□□□□□ -0.74
CBWD3-208ENST00000612050 MARCH7Q9H992 704 aa10.43□□□□□ -0.74
CBWD3-208ENST00000612050 FN3KRPQ9HA64 309 aa10.43□□□□□ -0.74
CBWD3-208ENST00000612050 MRPL15Q9P015 296 aaKnown RBP10.43□□□□□ -0.74
CBWD3-208ENST00000612050 NSD1Q96L73 2696 aaPredicted RBP10.43□□□□□ -0.74
CBWD3-208ENST00000612050 SLC22A31A6NKX4 558 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 CD300LBA8K4G0 201 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 PHYHO14832 338 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 PNPP00491 289 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 IGHV2-5P01817 119 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 NAA10P41227 235 aaPredicted RBP10.42□□□□□ -0.74
CBWD3-208ENST00000612050 DAPP51397 102 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 PRSS12P56730 875 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 LMO4P61968 165 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 RSPO1Q2MKA7 263 aaPredicted RBP10.42□□□□□ -0.74
CBWD3-208ENST00000612050 SNAI3Q3KNW1 292 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 ESCO2Q56NI9 601 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 TMEM255AQ5JRV8 349 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 DCAF12L2Q5VW00 463 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 LIPNQ5VXI9 398 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 TMEM236Q5W0B7 351 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 FAHD2BQ6P2I3 314 aaPredicted RBP10.42□□□□□ -0.74
CBWD3-208ENST00000612050 NLRC3Q7RTR2 1065 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 SLC16A9Q7RTY1 509 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 PRIMA1Q86XR5 153 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 GID4Q8IVV7 300 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 TIGD4Q8IY51 512 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 CSNK2A3Q8NEV1 391 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 OR10S1Q8NGN2 331 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 FAHD2AQ96GK7 314 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 RBM4BQ9BQ04 359 aaKnown RBP10.42□□□□□ -0.74
CBWD3-208ENST00000612050 SOX7Q9BT81 388 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 REPIN1Q9BWE0 567 aaKnown RBP10.42□□□□□ -0.74
CBWD3-208ENST00000612050 MROQ9BYG7 248 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 YIPF3Q9GZM5 350 aa10.42□□□□□ -0.74
CBWD3-208ENST00000612050 GABARAPL1Q9H0R8 117 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms