RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 NR2C1P13056 603 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 RAB3BP20337 219 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 NPR2P20594 1047 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 OR10A3P58181 314 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 RPL27P61353 136 aaKnown RBP7.7□□□□□ -1.18
SMAD4-217ENST00000611848 MELKQ14680 651 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 PPA1Q15181 289 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 CEACAM16Q2WEN9 425 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 PHYHD1Q5SRE7 291 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 LINGO2Q7L985 606 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 AKAP14Q86UN6 197 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 TMEM200AQ86VY9 491 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 CDC20BQ86Y33 519 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 WFDC8Q8IUA0 241 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 OR6V1Q8N148 313 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 ZBTB8BQ8NAP8 495 aaPredicted RBP7.7□□□□□ -1.18
SMAD4-217ENST00000611848 ZNF511Q8NB15 262 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 OR1K1Q8NGR3 316 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 OR13C5Q8NGS8 318 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 ZNF519Q8TB69 540 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 TMEM54Q969K7 222 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 TSSK2Q96PF2 358 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 KCNJ15Q99712 375 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 MRPL13Q9BYD1 178 aaKnown RBP7.7□□□□□ -1.18
SMAD4-217ENST00000611848 TTTY10Q9BZA0 68 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 ULBP2Q9BZM5 246 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 OBP2BQ9NPH6 170 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 SLC17A5Q9NRA2 495 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 KLHDC2Q9Y2U9 406 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 AMDHD2Q9Y303 409 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 APCP25054 2843 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 RTTNQ86VV8 2226 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 A6NIZ1 184 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 NOTOA8MTQ0 251 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 FAM171A2A8MVW0 826 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 DEFB108AA8MXU0 73 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 ABHD16AO95870 558 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 WNT11O96014 354 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 HRGP04196 525 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 TACSTD2P09758 323 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 PGA4P0DJD7 388 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 PGA3P0DJD8 388 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 PSMB10P40306 273 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 EIF2B2P49770 351 aaKnown RBP7.7□□□□□ -1.18
SMAD4-217ENST00000611848 MMP16P51512 607 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 TPTEP56180 551 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 CLRN1P58418 232 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 NANOS3P60323 173 aaKnown RBP7.7□□□□□ -1.18
SMAD4-217ENST00000611848 UBE2NP61088 152 aaKnown RBP7.7□□□□□ -1.18
SMAD4-217ENST00000611848 RAP1BP61224 184 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 RAP1AP62834 184 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 IL18Q14116 193 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 TBRG1Q3YBR2 411 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 YIF1BQ5BJH7 314 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 ANKRD16Q6P6B7 361 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 KLHL24Q6TFL4 600 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 ZNF627Q7L945 461 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 WDFY1Q8IWB7 410 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 CCDC36Q8IYA8 594 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 BCL2L2Q92843 193 aaPredicted RBP7.7□□□□□ -1.18
SMAD4-217ENST00000611848 MAP6Q96JE9 813 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 CLEC4MQ9H2X3 399 aaPredicted RBP7.7□□□□□ -1.18
SMAD4-217ENST00000611848 WDR76Q9H967 626 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 MOV10Q9HCE1 1003 aaKnown RBP7.7□□□□□ -1.18
SMAD4-217ENST00000611848 SRA1Q9HD15 236 aaKnown RBP7.7□□□□□ -1.18
SMAD4-217ENST00000611848 VSX1Q9NZR4 365 aaPredicted RBP7.7□□□□□ -1.18
SMAD4-217ENST00000611848 ABRACLQ9P1F3 81 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 MRM2Q9UI43 246 aaKnown RBP7.7□□□□□ -1.18
SMAD4-217ENST00000611848 ZNF281Q9Y2X9 895 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 SLC25A15Q9Y619 301 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 FKBP7Q9Y680 259 aa7.7□□□□□ -1.18
SMAD4-217ENST00000611848 POLQO75417 2590 aa7.69□□□□□ -1.18
SMAD4-217ENST00000611848 ARPC4-TTLL3A0A0A6YYG9 625 aa7.69□□□□□ -1.18
SMAD4-217ENST00000611848 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.69□□□□□ -1.18
SMAD4-217ENST00000611848 PRSS37A4D1T9 235 aa7.69□□□□□ -1.18
SMAD4-217ENST00000611848 FAM25AB3EWG3 89 aa7.69□□□□□ -1.18
SMAD4-217ENST00000611848 FAM25CB3EWG5 89 aa7.69□□□□□ -1.18
SMAD4-217ENST00000611848 FAM25GB3EWG6 89 aa7.69□□□□□ -1.18
SMAD4-217ENST00000611848 ZNF879B4DU55 563 aa7.69□□□□□ -1.18
SMAD4-217ENST00000611848 PIN1P1O15428 100 aa7.69□□□□□ -1.18
SMAD4-217ENST00000611848 DHHO43323 396 aa7.69□□□□□ -1.18
SMAD4-217ENST00000611848 TMEM127O75204 238 aa7.69□□□□□ -1.18
SMAD4-217ENST00000611848 EIF4EP06730 217 aaKnown RBP7.69□□□□□ -1.18
SMAD4-217ENST00000611848 QDPRP09417 244 aa7.69□□□□□ -1.18
SMAD4-217ENST00000611848 FAM157BP0CG42 384 aa7.69□□□□□ -1.18
SMAD4-217ENST00000611848 ALOX5APP20292 161 aa7.69□□□□□ -1.18
SMAD4-217ENST00000611848 CENPAP49450 140 aa7.69□□□□□ -1.18
SMAD4-217ENST00000611848 ZNF133P52736 654 aaPredicted RBP7.69□□□□□ -1.18
SMAD4-217ENST00000611848 ARF1P84077 181 aaKnown RBP7.69□□□□□ -1.18
SMAD4-217ENST00000611848 EGR3Q06889 387 aa7.69□□□□□ -1.18
SMAD4-217ENST00000611848 HIST3H3Q16695 136 aa7.69□□□□□ -1.18
SMAD4-217ENST00000611848 HSD17B12Q53GQ0 312 aa7.69□□□□□ -1.18
SMAD4-217ENST00000611848 OXLD1Q5BKU9 147 aa7.69□□□□□ -1.18
SMAD4-217ENST00000611848 TRIQKQ629K1 86 aa7.69□□□□□ -1.18
SMAD4-217ENST00000611848 ALKBH2Q6NS38 261 aa7.69□□□□□ -1.18
SMAD4-217ENST00000611848 ZNF544Q6NX49 715 aa7.69□□□□□ -1.18
SMAD4-217ENST00000611848 LRFN4Q6PJG9 635 aa7.69□□□□□ -1.18
SMAD4-217ENST00000611848 WDR31Q8NA23 367 aa7.69□□□□□ -1.18
SMAD4-217ENST00000611848 DUSP18Q8NEJ0 188 aa7.69□□□□□ -1.18
SMAD4-217ENST00000611848 NOXO1Q8NFA2 376 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms