RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 HS3ST3B1Q9Y662 390 aa10.43□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 ASPMQ8IZT6 3477 aa10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 AQP7P3A6NL99 342 aa10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 D6RAR5 112 aa10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 TP53I11O14683 189 aa10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 FGF5P12034 268 aa10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 CX3CR1P49238 355 aa10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 DHODHQ02127 395 aa10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 SSBP1Q04837 148 aaKnown RBP10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 DHRS2Q13268 280 aa10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 HLXQ14774 488 aaPredicted RBP10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 LPAL2Q16609 132 aa10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 CLLU1Q5K131 121 aa10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 LY6G6FQ5SQ64 297 aa10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 ZNF283Q8N7M2 679 aa10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 MRGPRFQ96AM1 343 aa10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 FOXRED1Q96CU9 486 aaPredicted RBP10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 PROK2Q9HC23 129 aa10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 VSIG4Q9Y279 399 aa10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 KCNK7Q9Y2U2 307 aa10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 OR14I1A6ND48 311 aa10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 F5H5K5 113 aa10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 COX6A1P12074 109 aa10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 HRH1P35367 487 aa10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 RAB14P61106 215 aa10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 LRRC37A5PQ49AS3 106 aa10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 GLIPR1L1Q6UWM5 242 aa10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 RFPL4BQ6ZWI9 263 aa10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 TMUB2Q71RG4 321 aa10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 OR5AS1Q8N127 324 aa10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 C12orf45Q8N5I9 185 aaPredicted RBP10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 LIN37Q96GY3 246 aaPredicted RBP10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 SEC22AQ96IW7 307 aa10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 IMMP1LQ96LU5 166 aa10.42□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 LOC400499M0QZD8 3231 aa10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 A0A0A6YYD4 124 aa10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 MPIG6BO95866 241 aa10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 CD74P04233 296 aa10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 S100A11P31949 105 aa10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 RNASE10Q5GAN6 216 aaKnown RBP10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 CCDC28AQ8IWP9 274 aa10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 ZNF837Q96EG3 531 aaPredicted RBP10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 SLC25A21Q9BQT8 299 aaPredicted RBP10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 ZNF160Q9HCG1 818 aa10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 COLQQ9Y215 455 aaPredicted RBP10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 TMEM265A0A087WTH1 108 aa10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 ARPC4-TTLL3A0A0A6YYG9 625 aa10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 SOCS1O15524 211 aa10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 PMS2P2O95744 297 aa10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 HLA-AP01891 365 aaKnown RBP10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 PDGFAP04085 211 aa10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 PPP3CBP16298 524 aa10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 RAB6AP20340 208 aa10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 EIF1P41567 113 aaKnown RBP10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 RPS18P62269 152 aaKnown RBP10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 IL11RAQ14626 422 aa10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 HIST3H3Q16695 136 aa10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 NHLRC3Q5JS37 347 aa10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 TMEM156Q8N614 296 aa10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 STEAP2Q8NFT2 490 aa10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 COQ8AQ8NI60 647 aa10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 CCDC120Q96HB5 630 aa10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 TMEM41AQ96HV5 264 aa10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 SLCO5A1Q9H2Y9 848 aa10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 KCNN3Q9UGI6 736 aa10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 HDGFL3Q9Y3E1 203 aa10.41□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 OR5H15A6NDH6 313 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 SSX5O60225 188 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 ZIC3O60481 467 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 PMP2P02689 132 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 HCKP08631 526 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 CD96P40200 585 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 SLC6A9P48067 706 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 CCDC157Q569K6 752 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 FAM209AQ5JX71 171 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 ZNF529Q6P280 563 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 RHOUQ7L0Q8 258 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 AGBL5Q8NDL9 886 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 PTX4Q96A99 478 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 RBM24Q9BX46 236 aaKnown RBP10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 TMPRSS13Q9BYE2 586 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 CST11Q9H112 138 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 ALX4Q9H161 411 aaPredicted RBP10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 COQ3Q9NZJ6 369 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 UPB1Q9UBR1 384 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 MRPS28Q9Y2Q9 187 aaKnown RBP10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 NOP16Q9Y3C1 178 aaKnown RBP10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 AUP1Q9Y679 476 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 LOC102723996A0A087X1L8 192 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 A0A0A6YYH2 397 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 IGKV1-9A0A0C4DH69 117 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 A6NJ64 397 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 OR2AT4A6NND4 320 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 H3BUI4 141 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 CRYZL1O95825 349 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 BPNT1O95861 308 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 DBHP09172 617 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 PRSS12P56730 875 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 SLC35A1P78382 337 aa10.4□□□□□ -0.74
HMGN3-AS1-201ENST00000604516 H3F3AP84243 136 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms