RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 RAXQ9Y2V3 346 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 COLEC10Q9Y6Z7 277 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 A0A0A0MQY5 61 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 RNF222A6NCQ9 220 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 BBIP1A8MTZ0 92 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 ARPC2O15144 300 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 CYB5BO43169 146 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 EFNA2O43921 213 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 FAM20BO75063 409 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 YIF1AO95070 293 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 SFTPBP07988 381 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 UBBP0CG47 229 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 MGMTP16455 207 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 CNR2P34972 360 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 MATKP42679 507 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 GCLMP48507 274 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 ERVFC1-1P60608 527 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 STXBP1P61764 594 aaKnown RBP4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 RPS27AP62979 156 aaKnown RBP4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 UBA52P62987 128 aaKnown RBP4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 EIF5AP63241 154 aaKnown RBP4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 IL13RA1P78552 427 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 HSF1Q00613 529 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 VAMP3Q15836 100 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 DMRTC1Q5HYR2 192 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 TMEM244Q5VVB8 128 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 LYSMD4Q5XG99 296 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 PRSS45Q7RTY3 260 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 H2BFWTQ7Z2G1 175 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 RELL2Q8NC24 303 aaPredicted RBP4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 OR4C5Q8NGB2 326 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 ORAOV1Q8WV07 137 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 MRPS31Q92665 395 aaKnown RBP4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 TMEM19Q96HH6 336 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 VSTM2LQ96N03 204 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 PLIN4Q96Q06 1357 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 ACTR3CQ9C0K3 210 aaPredicted RBP4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 POPDC2Q9HBU9 364 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 BPIFA1Q9NP55 256 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 FBXL4Q9UKA2 621 aa4.45□□□□□ -1.7
SPTBN1-206ENST00000602898 A0A1W2PPV9 198 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 OR5H15A6NDH6 313 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 OR5H1A6NKK0 313 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 FAM159BA6NKW6 160 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 F5H768 121 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 UBFD1O14562 309 aaKnown RBP4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 DVL1O14640 695 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 DBHP09172 617 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 HKR1P10072 659 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 ZNF35P13682 527 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 IRF2P14316 349 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 UGT2B7P16662 529 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 ARL4AP40617 200 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 CDKN2BP42772 138 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 PGGT1BP53609 377 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 CRISP1P54107 249 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 DLK1P80370 383 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 EWSR1Q01844 656 aaKnown RBP eCLIP4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 FOXL1Q12952 345 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 UBE2V1Q13404 147 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 DPYSL3Q14195 570 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 JOSD1Q15040 202 aaPredicted RBP4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 SHHQ15465 462 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 C2orf68Q2NKX9 166 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 SMIM21Q3B7S5 101 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 SLC22A6Q4U2R8 563 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 ACSM3Q53FZ2 586 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 SPIN4Q56A73 249 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 TFDP3Q5H9I0 405 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 IDNKQ5T6J7 187 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 ZNF660Q6AZW8 331 aaPredicted RBP4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 DOK6Q6PKX4 331 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 ASB18Q6ZVZ8 466 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 WDR53Q7Z5U6 358 aaPredicted RBP4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 RIMKLAQ8IXN7 391 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 SMIM20Q8N5G0 67 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 PNLDC1Q8NA58 520 aaKnown RBP4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 MDS2Q8NDY4 140 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 TMEM163Q8TC26 289 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 LGALS14Q8TCE9 139 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 ABHD3Q8WU67 409 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 CXorf40BQ96DE9 158 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 ZNF419Q96HQ0 510 aaPredicted RBP4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 DIRAS2Q96HU8 199 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 OR8B4Q96RC9 309 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 S100A13Q99584 98 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 SOSTQ9BQB4 213 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 G6PC3Q9BUM1 346 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 C20orf85Q9H1P6 137 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 UBE2ZQ9H832 354 aaPredicted RBP4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 SLC2A4RGQ9NR83 387 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 DDIT4Q9NX09 232 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 PRR13Q9NZ81 148 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 FLRT1Q9NZU1 646 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 JKAMPQ9P055 326 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 COMMD3Q9UBI1 195 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 SAMD4AQ9UPU9 718 aaKnown RBP4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 ORC6Q9Y5N6 252 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 OR51B4Q9Y5P0 310 aa4.44□□□□□ -1.7
SPTBN1-206ENST00000602898 MGAMO43451 1857 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms