RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 TNFSF13O75888 250 aa15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 UBL3O95164 117 aa15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 PNPP00491 289 aa15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 UCHL1P09936 223 aa15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 EPXP11678 715 aa15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 GBX2P52951 348 aaPredicted RBP15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 KRT74Q7RTS7 529 aa15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 FAM220AQ7Z4H9 259 aa15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 KRT77Q7Z794 578 aa15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 ZNF679Q8IYX0 411 aa15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 ASB17Q8WXJ9 295 aa15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 PPP1R14AQ96A00 147 aa15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 PDCD1LG2Q9BQ51 273 aa15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 GHITMQ9H3K2 345 aa15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 SH3BGRL2Q9UJC5 107 aa15.19■□□□□ 0.02
PPFIA3-207ENST00000602716 TPRP12270 2363 aaKnown RBP15.18■□□□□ 0.02
PPFIA3-207ENST00000602716 A0A096LPE4 126 aa15.18■□□□□ 0.02
PPFIA3-207ENST00000602716 A0A1W2PPZ6 126 aa15.18■□□□□ 0.02
PPFIA3-207ENST00000602716 ZNF503-AS2A6NEH8 195 aa15.18■□□□□ 0.02
PPFIA3-207ENST00000602716 ZNF587BE7ETH6 402 aa15.18■□□□□ 0.02
PPFIA3-207ENST00000602716 ERVH48-1M5A8F1 160 aa15.18■□□□□ 0.02
PPFIA3-207ENST00000602716 WDR1O75083 606 aa15.18■□□□□ 0.02
PPFIA3-207ENST00000602716 DHFRP00374 187 aa15.18■□□□□ 0.02
PPFIA3-207ENST00000602716 ITGA5P08648 1049 aa15.18■□□□□ 0.02
PPFIA3-207ENST00000602716 SNRPBP14678 240 aaKnown RBP15.18■□□□□ 0.02
PPFIA3-207ENST00000602716 GNG2P59768 71 aa15.18■□□□□ 0.02
PPFIA3-207ENST00000602716 RPS11P62280 158 aaKnown RBP eCLIP15.18■□□□□ 0.02
PPFIA3-207ENST00000602716 LSM6P62312 80 aaKnown RBP15.18■□□□□ 0.02
PPFIA3-207ENST00000602716 FCN2Q15485 313 aa15.18■□□□□ 0.02
PPFIA3-207ENST00000602716 ZNF813Q6ZN06 617 aa15.18■□□□□ 0.02
PPFIA3-207ENST00000602716 DPAGT1Q9H3H5 408 aa15.18■□□□□ 0.02
PPFIA3-207ENST00000602716 NUDT15Q9NV35 164 aa15.18■□□□□ 0.02
PPFIA3-207ENST00000602716 ZNF224Q9NZL3 707 aa15.18■□□□□ 0.02
PPFIA3-207ENST00000602716 UPB1Q9UBR1 384 aa15.18■□□□□ 0.02
PPFIA3-207ENST00000602716 A0A0B4J203 849 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 A0A1W2PPK0 400 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 FIGNL2A6NMB9 653 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 TTLL8A6PVC2 850 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 RPL36A-HNRNPH2H7BZ11 118 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 DOK2O60496 412 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 ARL6IP5O75915 188 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 IL18BPO95998 194 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 CD1AP06126 327 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 KIR3DL2P43630 455 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 MMP15P51511 669 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 SNRPD2P62316 118 aaKnown RBP15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 FAM27BQ5VT28 67 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 SYT9Q86SS6 491 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 DOLPP1Q86YN1 238 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 SKA3Q8IX90 412 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 PRSS35Q8N3Z0 413 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 SLC22A24Q8N4F4 322 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 RPS4Y2Q8TD47 263 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 RGP1Q92546 391 aaPredicted RBP15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 HYLS1Q96M11 299 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 MED28Q9H204 178 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 C1orf198Q9H425 327 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 HSPB11Q9Y547 144 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 NUBP2Q9Y5Y2 271 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 SPTA1P02549 2419 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 TRAV6A0A075B6T7 132 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 SRSF10O75494 262 aaKnown RBP15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 GATBO75879 557 aaKnown RBP15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 CD3GP09693 182 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 GABRA1P14867 456 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 HTR2BP41595 481 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 DGCR2P98153 550 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 PITPNAQ00169 270 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 RPL22L1Q6P5R6 122 aaKnown RBP15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 TOMM5Q8N4H5 51 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 OR2AJ1Q8NGZ0 328 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 DOCK7Q96N67 2140 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 NOX3Q9HBY0 568 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 GLRX2Q9NS18 164 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 FRRS1LQ9P0K9 344 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 SLC22A13Q9Y226 551 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 EMC9Q9Y3B6 208 aa15.17■□□□□ 0.02
PPFIA3-207ENST00000602716 H3BSH0 61 aa15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 TCRBP04435 133 aa15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 MAGEB1P43366 347 aa15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 ODF4Q2M2E3 257 aa15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 WDR38Q5JTN6 314 aa15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 FBXW9Q5XUX1 488 aa15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 KCTD18Q6PI47 426 aaPredicted RBP15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 BAIAP2L2Q6UXY1 529 aa15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 C9orf62Q8N4C0 152 aa15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 SNAPC3Q92966 411 aa15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 MRPL48Q96GC5 212 aaKnown RBP15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 C4orf45Q96LM5 186 aa15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 BRD7Q9NPI1 651 aa15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 ZNF835Q9Y2P0 537 aa15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 CACNA1CQ13936 2221 aa15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 TRBV2A0A0J9YWF9 115 aa15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 ANKRD61A6NGH8 418 aa15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 ZFPL1O95159 310 aa15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 ZNF32P17041 273 aa15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 STOMP27105 288 aa15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 RIDAP52758 137 aaKnown RBP15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 PER3P56645 1201 aa15.16■□□□□ 0.02
PPFIA3-207ENST00000602716 CCDC58Q4VC31 144 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms