RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 MDKP21741 143 aaPredicted RBP14.65□□□□□ -0.06
SHKBP1-223ENST00000600552 PRDX6P30041 224 aa14.65□□□□□ -0.06
SHKBP1-223ENST00000600552 PRKXP51817 358 aa14.65□□□□□ -0.06
SHKBP1-223ENST00000600552 IL13RA1P78552 427 aa14.65□□□□□ -0.06
SHKBP1-223ENST00000600552 POU4F2Q12837 409 aa14.65□□□□□ -0.06
SHKBP1-223ENST00000600552 ZNF181Q2M3W8 571 aa14.65□□□□□ -0.06
SHKBP1-223ENST00000600552 SNAI3Q3KNW1 292 aa14.65□□□□□ -0.06
SHKBP1-223ENST00000600552 KRTAP27-1Q3LI81 207 aa14.65□□□□□ -0.06
SHKBP1-223ENST00000600552 LYPD4Q6UWN0 246 aa14.65□□□□□ -0.06
SHKBP1-223ENST00000600552 DCDC5Q6ZRR9 648 aa14.65□□□□□ -0.06
SHKBP1-223ENST00000600552 FITM2Q8N6M3 262 aa14.65□□□□□ -0.06
SHKBP1-223ENST00000600552 OR52L1Q8NGH7 329 aa14.65□□□□□ -0.06
SHKBP1-223ENST00000600552 OR9Q1Q8NGQ5 310 aa14.65□□□□□ -0.06
SHKBP1-223ENST00000600552 ADAT1Q9BUB4 502 aaKnown RBP14.65□□□□□ -0.06
SHKBP1-223ENST00000600552 MARCH7Q9H992 704 aa14.65□□□□□ -0.06
SHKBP1-223ENST00000600552 FN3KRPQ9HA64 309 aa14.65□□□□□ -0.06
SHKBP1-223ENST00000600552 PNRC2Q9NPJ4 139 aaKnown RBP14.65□□□□□ -0.06
SHKBP1-223ENST00000600552 RNF7Q9UBF6 113 aa14.65□□□□□ -0.06
SHKBP1-223ENST00000600552 MAGEL2Q9UJ55 1249 aa14.65□□□□□ -0.06
SHKBP1-223ENST00000600552 hCG_1807616A0A1W2PRN6 198 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 C22orf46C9J442 243 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 ARPC2O15144 300 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 ADAM20O43506 726 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 IDH3BO43837 385 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 PLATP00750 562 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 SEMG1P04279 462 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 SFTPBP07988 381 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 SPARCP09486 303 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 SLC2A1P11166 492 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 CPT2P23786 658 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 CD200P41217 278 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 GSSP48637 474 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 MXRA7P84157 204 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 ZNF92Q03936 586 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 TSPAN31Q12999 210 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 TUSC1Q2TAM9 212 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 GPR157Q5UAW9 335 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 PGBD2Q6P3X8 592 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 C16orf87Q6PH81 154 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 ZNF620Q6ZNG0 422 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 ZDHHC21Q8IVQ6 265 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 OR9Q2Q8NGE9 314 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 ZNRF4Q8WWF5 429 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 TMIGD2Q96BF3 282 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 COPS4Q9BT78 406 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 MED4Q9NPJ6 270 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 C1orf123Q9NWV4 160 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 ERVK-18Q9QC07 812 aa14.64□□□□□ -0.07
SHKBP1-223ENST00000600552 PHYHO14832 338 aa14.63□□□□□ -0.07
SHKBP1-223ENST00000600552 ENSAO43768 121 aaKnown RBP14.63□□□□□ -0.07
SHKBP1-223ENST00000600552 CRYBA1P05813 215 aa14.63□□□□□ -0.07
SHKBP1-223ENST00000600552 PPIAL4GP0DN37 164 aa14.63□□□□□ -0.07
SHKBP1-223ENST00000600552 ANOS1P23352 680 aa14.63□□□□□ -0.07
SHKBP1-223ENST00000600552 GATA4P43694 442 aa14.63□□□□□ -0.07
SHKBP1-223ENST00000600552 PPP1R8Q12972 351 aaKnown RBP14.63□□□□□ -0.07
SHKBP1-223ENST00000600552 SAMD4BQ5PRF9 694 aaKnown RBP14.63□□□□□ -0.07
SHKBP1-223ENST00000600552 PRR31Q5SQ13 230 aa14.63□□□□□ -0.07
SHKBP1-223ENST00000600552 GLYATL3Q5SZD4 288 aa14.63□□□□□ -0.07
SHKBP1-223ENST00000600552 CYP2R1Q6VVX0 501 aa14.63□□□□□ -0.07
SHKBP1-223ENST00000600552 ZNF826PQ6ZT77 177 aa14.63□□□□□ -0.07
SHKBP1-223ENST00000600552 DCXRQ7Z4W1 244 aa14.63□□□□□ -0.07
SHKBP1-223ENST00000600552 CPLX4Q7Z7G2 160 aa14.63□□□□□ -0.07
SHKBP1-223ENST00000600552 Q8TCH9 128 aa14.63□□□□□ -0.07
SHKBP1-223ENST00000600552 TBC1D23Q9NUY8 699 aa14.63□□□□□ -0.07
SHKBP1-223ENST00000600552 IGHV3OR15-7A0A075B7D8 119 aa14.62□□□□□ -0.07
SHKBP1-223ENST00000600552 FAM181BA6NEQ2 426 aa14.62□□□□□ -0.07
SHKBP1-223ENST00000600552 CLDN34H7C241 214 aa14.62□□□□□ -0.07
SHKBP1-223ENST00000600552 LGALS8O00214 317 aa14.62□□□□□ -0.07
SHKBP1-223ENST00000600552 TNFRSF11BO00300 401 aa14.62□□□□□ -0.07
SHKBP1-223ENST00000600552 TBX1O43435 398 aa14.62□□□□□ -0.07
SHKBP1-223ENST00000600552 TOX4O94842 621 aa14.62□□□□□ -0.07
SHKBP1-223ENST00000600552 GYPAP02724 150 aa14.62□□□□□ -0.07
SHKBP1-223ENST00000600552 GYPBP06028 91 aa14.62□□□□□ -0.07
SHKBP1-223ENST00000600552 ZNF841Q6ZN19 808 aa14.62□□□□□ -0.07
SHKBP1-223ENST00000600552 C9orf139Q6ZV77 190 aa14.62□□□□□ -0.07
SHKBP1-223ENST00000600552 PDZD9Q8IXQ8 264 aa14.62□□□□□ -0.07
SHKBP1-223ENST00000600552 CELF2-AS1Q8N7Q2 184 aa14.62□□□□□ -0.07
SHKBP1-223ENST00000600552 ZNF511Q8NB15 262 aa14.62□□□□□ -0.07
SHKBP1-223ENST00000600552 OR2T4Q8NH00 348 aa14.62□□□□□ -0.07
SHKBP1-223ENST00000600552 ERGIC1Q969X5 290 aa14.62□□□□□ -0.07
SHKBP1-223ENST00000600552 ZNF696Q9H7X3 374 aa14.62□□□□□ -0.07
SHKBP1-223ENST00000600552 KIF17Q9P2E2 1029 aa14.62□□□□□ -0.07
SHKBP1-223ENST00000600552 CTSZQ9UBR2 303 aa14.62□□□□□ -0.07
SHKBP1-223ENST00000600552 KCNG2Q9UJ96 466 aa14.62□□□□□ -0.07
SHKBP1-223ENST00000600552 CDH10Q9Y6N8 788 aa14.62□□□□□ -0.07
SHKBP1-223ENST00000600552 PKD1L1Q8TDX9 2849 aa14.62□□□□□ -0.07
SHKBP1-223ENST00000600552 PSKH1P11801 424 aa14.61□□□□□ -0.07
SHKBP1-223ENST00000600552 HSD17B1P14061 328 aa14.61□□□□□ -0.07
SHKBP1-223ENST00000600552 SRSF4Q08170 494 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-223ENST00000600552 KCNJ8Q15842 424 aa14.61□□□□□ -0.07
SHKBP1-223ENST00000600552 CD276Q5ZPR3 534 aa14.61□□□□□ -0.07
SHKBP1-223ENST00000600552 FIP1L1Q6UN15 594 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-223ENST00000600552 TREML4Q6UXN2 200 aa14.61□□□□□ -0.07
SHKBP1-223ENST00000600552 KIR3DL3Q8N743 410 aa14.61□□□□□ -0.07
SHKBP1-223ENST00000600552 SLC37A3Q8NCC5 494 aa14.61□□□□□ -0.07
SHKBP1-223ENST00000600552 OR56B2PQ8NGI1 322 aa14.61□□□□□ -0.07
SHKBP1-223ENST00000600552 DACT3Q96B18 629 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-223ENST00000600552 OTULINQ96BN8 352 aa14.61□□□□□ -0.07
SHKBP1-223ENST00000600552 SLC22A4Q9H015 551 aa14.61□□□□□ -0.07
SHKBP1-223ENST00000600552 IL1RAPQ9NPH3 570 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms