RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 SNX33Q8WV41 574 aa11.74□□□□□ -0.53
IRF3-225ENST00000600022 C12orf43Q96C57 262 aaKnown RBP11.74□□□□□ -0.53
IRF3-225ENST00000600022 YIPF6Q96EC8 236 aa11.74□□□□□ -0.53
IRF3-225ENST00000600022 SLC25A44Q96H78 314 aaPredicted RBP11.74□□□□□ -0.53
IRF3-225ENST00000600022 TXNDC15Q96J42 360 aa11.74□□□□□ -0.53
IRF3-225ENST00000600022 ZNF75AQ96N20 296 aa11.74□□□□□ -0.53
IRF3-225ENST00000600022 OR2M2Q96R28 347 aa11.74□□□□□ -0.53
IRF3-225ENST00000600022 OR5M11Q96RB7 305 aa11.74□□□□□ -0.53
IRF3-225ENST00000600022 TSC22D3Q99576 134 aa11.74□□□□□ -0.53
IRF3-225ENST00000600022 TBX5Q99593 518 aa11.74□□□□□ -0.53
IRF3-225ENST00000600022 MRPL13Q9BYD1 178 aaKnown RBP11.74□□□□□ -0.53
IRF3-225ENST00000600022 OCEL1Q9H607 264 aa11.74□□□□□ -0.53
IRF3-225ENST00000600022 TRIM36Q9NQ86 728 aa11.74□□□□□ -0.53
IRF3-225ENST00000600022 MYEF2Q9P2K5 600 aaKnown RBP11.74□□□□□ -0.53
IRF3-225ENST00000600022 H3BMQ9 156 aa11.73□□□□□ -0.53
IRF3-225ENST00000600022 J3QRE1 110 aa11.73□□□□□ -0.53
IRF3-225ENST00000600022 SLC16A7O60669 478 aa11.73□□□□□ -0.53
IRF3-225ENST00000600022 KHDRBS3O75525 346 aaKnown RBP11.73□□□□□ -0.53
IRF3-225ENST00000600022 GABARAPO95166 117 aa11.73□□□□□ -0.53
IRF3-225ENST00000600022 LIMS3P0CW19 117 aa11.73□□□□□ -0.53
IRF3-225ENST00000600022 LIMS4P0CW20 117 aa11.73□□□□□ -0.53
IRF3-225ENST00000600022 PGA4P0DJD7 388 aa11.73□□□□□ -0.53
IRF3-225ENST00000600022 PGA3P0DJD8 388 aa11.73□□□□□ -0.53
IRF3-225ENST00000600022 NR4A1P22736 598 aa11.73□□□□□ -0.53
IRF3-225ENST00000600022 PSMA1P25786 263 aaKnown RBP11.73□□□□□ -0.53
IRF3-225ENST00000600022 NAA10P41227 235 aaPredicted RBP11.73□□□□□ -0.53
IRF3-225ENST00000600022 GUCA1AP43080 201 aaPredicted RBP11.73□□□□□ -0.53
IRF3-225ENST00000600022 ALDH3B1P43353 468 aa11.73□□□□□ -0.53
IRF3-225ENST00000600022 BDH1Q02338 343 aa11.73□□□□□ -0.53
IRF3-225ENST00000600022 THEM4Q5T1C6 240 aa11.73□□□□□ -0.53
IRF3-225ENST00000600022 ZNF322Q6U7Q0 402 aaPredicted RBP11.73□□□□□ -0.53
IRF3-225ENST00000600022 FAM220AQ7Z4H9 259 aa11.73□□□□□ -0.53
IRF3-225ENST00000600022 ZBTB46Q86UZ6 589 aa11.73□□□□□ -0.53
IRF3-225ENST00000600022 ERI1Q8IV48 349 aaKnown RBP11.73□□□□□ -0.53
IRF3-225ENST00000600022 GPR137CQ8N3F9 429 aa11.73□□□□□ -0.53
IRF3-225ENST00000600022 FGFBP3Q8TAT2 258 aa11.73□□□□□ -0.53
IRF3-225ENST00000600022 GATAD2BQ8WXI9 593 aa11.73□□□□□ -0.53
IRF3-225ENST00000600022 HPS1Q92902 700 aa11.73□□□□□ -0.53
IRF3-225ENST00000600022 YIPF5Q969M3 257 aa11.73□□□□□ -0.53
IRF3-225ENST00000600022 INTS14Q96SY0 518 aa11.73□□□□□ -0.53
IRF3-225ENST00000600022 SYT3Q9BQG1 590 aa11.73□□□□□ -0.53
IRF3-225ENST00000600022 YIPF3Q9GZM5 350 aa11.73□□□□□ -0.53
IRF3-225ENST00000600022 NUAK2Q9H093 628 aa11.73□□□□□ -0.53
IRF3-225ENST00000600022 METTL17Q9H7H0 456 aaPredicted RBP11.73□□□□□ -0.53
IRF3-225ENST00000600022 DYNLRB1Q9NP97 96 aa11.73□□□□□ -0.53
IRF3-225ENST00000600022 ZNF224Q9NZL3 707 aa11.73□□□□□ -0.53
IRF3-225ENST00000600022 B9D1Q9UPM9 204 aa11.73□□□□□ -0.53
IRF3-225ENST00000600022 LSM2Q9Y333 95 aaKnown RBP11.73□□□□□ -0.53
IRF3-225ENST00000600022 IGLV1-36A0A0B4J1U3 117 aa11.72□□□□□ -0.53
IRF3-225ENST00000600022 SLC43A1O75387 559 aa11.72□□□□□ -0.53
IRF3-225ENST00000600022 AVPP01185 164 aa11.72□□□□□ -0.53
IRF3-225ENST00000600022 PATE4P0C8F1 98 aa11.72□□□□□ -0.53
IRF3-225ENST00000600022 ZNF35P13682 527 aa11.72□□□□□ -0.53
IRF3-225ENST00000600022 HOXB1P14653 301 aaPredicted RBP11.72□□□□□ -0.53
IRF3-225ENST00000600022 ZNF823P16415 610 aa11.72□□□□□ -0.53
IRF3-225ENST00000600022 ARR3P36575 388 aa11.72□□□□□ -0.53
IRF3-225ENST00000600022 LIPAP38571 399 aa11.72□□□□□ -0.53
IRF3-225ENST00000600022 GBX2P52951 348 aaPredicted RBP11.72□□□□□ -0.53
IRF3-225ENST00000600022 ACSM1Q08AH1 577 aa11.72□□□□□ -0.53
IRF3-225ENST00000600022 MRPL28Q13084 256 aaKnown RBP11.72□□□□□ -0.53
IRF3-225ENST00000600022 LINC01590Q5TEZ4 76 aa11.72□□□□□ -0.53
IRF3-225ENST00000600022 GDPGP1Q6ZNW5 385 aa11.72□□□□□ -0.53
IRF3-225ENST00000600022 PLEKHG7Q6ZR37 379 aa11.72□□□□□ -0.53
IRF3-225ENST00000600022 C1orf229Q6ZS94 237 aaPredicted RBP11.72□□□□□ -0.53
IRF3-225ENST00000600022 EGFL6Q8IUX8 553 aa11.72□□□□□ -0.53
IRF3-225ENST00000600022 OR6V1Q8N148 313 aa11.72□□□□□ -0.53
IRF3-225ENST00000600022 SYT14Q8NB59 555 aa11.72□□□□□ -0.53
IRF3-225ENST00000600022 CLDND2Q8NHS1 167 aa11.72□□□□□ -0.53
IRF3-225ENST00000600022 SPRYD4Q8WW59 207 aaPredicted RBP11.72□□□□□ -0.53
IRF3-225ENST00000600022 OPALINQ96PE5 141 aa11.72□□□□□ -0.53
IRF3-225ENST00000600022 TREM2Q9NZC2 230 aa11.72□□□□□ -0.53
IRF3-225ENST00000600022 LAMP5Q9UJQ1 280 aa11.72□□□□□ -0.53
IRF3-225ENST00000600022 CMAHPQ9Y471 501 aa11.72□□□□□ -0.53
IRF3-225ENST00000600022 MGAM2Q2M2H8 2515 aa11.71□□□□□ -0.53
IRF3-225ENST00000600022 A0A1W2PQL4 384 aaPredicted RBP11.71□□□□□ -0.53
IRF3-225ENST00000600022 J3QLW9 94 aa11.71□□□□□ -0.53
IRF3-225ENST00000600022 DCTN6O00399 190 aa11.71□□□□□ -0.53
IRF3-225ENST00000600022 SELENOFO60613 162 aa11.71□□□□□ -0.53
IRF3-225ENST00000600022 CD79AP11912 226 aa11.71□□□□□ -0.53
IRF3-225ENST00000600022 CTLA4P16410 223 aa11.71□□□□□ -0.53
IRF3-225ENST00000600022 CPEP16870 476 aa11.71□□□□□ -0.53
IRF3-225ENST00000600022 ZNF14P17017 642 aaPredicted RBP11.71□□□□□ -0.53
IRF3-225ENST00000600022 ZNF19P17023 458 aa11.71□□□□□ -0.53
IRF3-225ENST00000600022 DVL1P1P54792 670 aaPredicted RBP11.71□□□□□ -0.53
IRF3-225ENST00000600022 HIST3H3Q16695 136 aa11.71□□□□□ -0.53
IRF3-225ENST00000600022 ALKBH6Q3KRA9 238 aa11.71□□□□□ -0.53
IRF3-225ENST00000600022 OR2G6Q5TZ20 316 aa11.71□□□□□ -0.53
IRF3-225ENST00000600022 C12orf54Q6X4T0 127 aa11.71□□□□□ -0.53
IRF3-225ENST00000600022 KCTD20Q7Z5Y7 419 aa11.71□□□□□ -0.53
IRF3-225ENST00000600022 SYS1Q8N2H4 156 aa11.71□□□□□ -0.53
IRF3-225ENST00000600022 SEMA6DQ8NFY4 1073 aa11.71□□□□□ -0.53
IRF3-225ENST00000600022 OR6N2Q8NGY6 317 aa11.71□□□□□ -0.53
IRF3-225ENST00000600022 ASB17Q8WXJ9 295 aa11.71□□□□□ -0.53
IRF3-225ENST00000600022 MRPL24Q96A35 216 aaKnown RBP11.71□□□□□ -0.53
IRF3-225ENST00000600022 TSSK2Q96PF2 358 aa11.71□□□□□ -0.53
IRF3-225ENST00000600022 WDR76Q9H967 626 aa11.71□□□□□ -0.53
IRF3-225ENST00000600022 HIF1ANQ9NWT6 349 aa11.71□□□□□ -0.53
IRF3-225ENST00000600022 NDUFB11Q9NX14 153 aa11.71□□□□□ -0.53
IRF3-225ENST00000600022 BABAM2Q9NXR7 383 aa11.71□□□□□ -0.53
IRF3-225ENST00000600022 METRNQ9UJH8 293 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms