RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 ESRRGP62508 458 aa11.97□□□□□ -0.49
LIG1-218ENST00000599322 CDK5Q00535 292 aa11.97□□□□□ -0.49
LIG1-218ENST00000599322 DBPQ10586 325 aaPredicted RBP11.97□□□□□ -0.49
LIG1-218ENST00000599322 OR8G1Q15617 311 aa11.97□□□□□ -0.49
LIG1-218ENST00000599322 ATP6AP1Q15904 470 aa11.97□□□□□ -0.49
LIG1-218ENST00000599322 PCK2Q16822 640 aa11.97□□□□□ -0.49
LIG1-218ENST00000599322 TIGD6Q17RP2 521 aa11.97□□□□□ -0.49
LIG1-218ENST00000599322 KRTAP27-1Q3LI81 207 aa11.97□□□□□ -0.49
LIG1-218ENST00000599322 LCN1P1Q5VSP4 162 aa11.97□□□□□ -0.49
LIG1-218ENST00000599322 FAHD2BQ6P2I3 314 aaPredicted RBP11.97□□□□□ -0.49
LIG1-218ENST00000599322 SPATC1Q76KD6 591 aa11.97□□□□□ -0.49
LIG1-218ENST00000599322 RHOUQ7L0Q8 258 aa11.97□□□□□ -0.49
LIG1-218ENST00000599322 DPY19L4Q7Z388 723 aa11.97□□□□□ -0.49
LIG1-218ENST00000599322 CPOQ8IVL8 374 aa11.97□□□□□ -0.49
LIG1-218ENST00000599322 HS3ST5Q8IZT8 346 aa11.97□□□□□ -0.49
LIG1-218ENST00000599322 SPERTQ8NA61 448 aa11.97□□□□□ -0.49
LIG1-218ENST00000599322 THEM6Q8WUY1 208 aa11.97□□□□□ -0.49
LIG1-218ENST00000599322 ERGIC1Q969X5 290 aa11.97□□□□□ -0.49
LIG1-218ENST00000599322 FAHD2AQ96GK7 314 aa11.97□□□□□ -0.49
LIG1-218ENST00000599322 SLC30A2Q9BRI3 323 aa11.97□□□□□ -0.49
LIG1-218ENST00000599322 SOX7Q9BT81 388 aa11.97□□□□□ -0.49
LIG1-218ENST00000599322 SLC25A19Q9HC21 320 aa11.97□□□□□ -0.49
LIG1-218ENST00000599322 PNRC2Q9NPJ4 139 aaKnown RBP11.97□□□□□ -0.49
LIG1-218ENST00000599322 TVP23BQ9NYZ1 205 aa11.97□□□□□ -0.49
LIG1-218ENST00000599322 CACNG2Q9Y698 323 aa11.97□□□□□ -0.49
LIG1-218ENST00000599322 A0A0G2JMP0 313 aa11.96□□□□□ -0.49
LIG1-218ENST00000599322 A0A0X1KG70 313 aa11.96□□□□□ -0.49
LIG1-218ENST00000599322 ANKRD30BLA7E2S9 258 aa11.96□□□□□ -0.49
LIG1-218ENST00000599322 CD300LBA8K4G0 201 aa11.96□□□□□ -0.49
LIG1-218ENST00000599322 FOXH1O75593 365 aa11.96□□□□□ -0.49
LIG1-218ENST00000599322 LYNP07948 512 aa11.96□□□□□ -0.49
LIG1-218ENST00000599322 THBS2P35442 1172 aa11.96□□□□□ -0.49
LIG1-218ENST00000599322 CX3CR1P49238 355 aa11.96□□□□□ -0.49
LIG1-218ENST00000599322 RSPO1Q2MKA7 263 aaPredicted RBP11.96□□□□□ -0.49
LIG1-218ENST00000599322 TMEM255AQ5JRV8 349 aa11.96□□□□□ -0.49
LIG1-218ENST00000599322 LIPNQ5VXI9 398 aa11.96□□□□□ -0.49
LIG1-218ENST00000599322 KCTD18Q6PI47 426 aaPredicted RBP11.96□□□□□ -0.49
LIG1-218ENST00000599322 LYPD4Q6UWN0 246 aa11.96□□□□□ -0.49
LIG1-218ENST00000599322 Q6ZR03 302 aa11.96□□□□□ -0.49
LIG1-218ENST00000599322 NAA40Q86UY6 237 aa11.96□□□□□ -0.49
LIG1-218ENST00000599322 PARP8Q8N3A8 854 aa11.96□□□□□ -0.49
LIG1-218ENST00000599322 FTMTQ8N4E7 242 aa11.96□□□□□ -0.49
LIG1-218ENST00000599322 CELF2-AS1Q8N7Q2 184 aa11.96□□□□□ -0.49
LIG1-218ENST00000599322 OR4M2Q8NGB6 313 aa11.96□□□□□ -0.49
LIG1-218ENST00000599322 OR10AD1Q8NGE0 317 aa11.96□□□□□ -0.49
LIG1-218ENST00000599322 OR52H1Q8NGJ2 320 aa11.96□□□□□ -0.49
LIG1-218ENST00000599322 ZNRF4Q8WWF5 429 aa11.96□□□□□ -0.49
LIG1-218ENST00000599322 ZMYND19Q96E35 227 aaPredicted RBP11.96□□□□□ -0.49
LIG1-218ENST00000599322 PGAM5Q96HS1 289 aa11.96□□□□□ -0.49
LIG1-218ENST00000599322 MEGF10Q96KG7 1140 aa11.96□□□□□ -0.49
LIG1-218ENST00000599322 ABHD6Q9BV23 337 aa11.96□□□□□ -0.49
LIG1-218ENST00000599322 OR10A2Q9H208 303 aa11.96□□□□□ -0.49
LIG1-218ENST00000599322 NIPAL2Q9H841 368 aa11.96□□□□□ -0.49
LIG1-218ENST00000599322 LAMP5Q9UJQ1 280 aa11.96□□□□□ -0.49
LIG1-218ENST00000599322 MALRD1Q5VYJ5 2156 aa11.95□□□□□ -0.5
LIG1-218ENST00000599322 FAM157AC9JC47 383 aa11.95□□□□□ -0.5
LIG1-218ENST00000599322 WNT9BO14905 357 aa11.95□□□□□ -0.5
LIG1-218ENST00000599322 GMDSO60547 372 aa11.95□□□□□ -0.5
LIG1-218ENST00000599322 IGHV2-5P01817 119 aa11.95□□□□□ -0.5
LIG1-218ENST00000599322 GATA3P23771 443 aa11.95□□□□□ -0.5
LIG1-218ENST00000599322 CPT2P23786 658 aa11.95□□□□□ -0.5
LIG1-218ENST00000599322 OTX1P32242 354 aaPredicted RBP11.95□□□□□ -0.5
LIG1-218ENST00000599322 MDH2P40926 338 aaKnown RBP11.95□□□□□ -0.5
LIG1-218ENST00000599322 BTG1P62324 171 aa11.95□□□□□ -0.5
LIG1-218ENST00000599322 TMEM155Q4W5P6 130 aa11.95□□□□□ -0.5
LIG1-218ENST00000599322 LINC01590Q5TEZ4 76 aa11.95□□□□□ -0.5
LIG1-218ENST00000599322 IL17RELQ6ZVW7 336 aa11.95□□□□□ -0.5
LIG1-218ENST00000599322 KRT77Q7Z794 578 aa11.95□□□□□ -0.5
LIG1-218ENST00000599322 KLBQ86Z14 1044 aa11.95□□□□□ -0.5
LIG1-218ENST00000599322 OR10S1Q8NGN2 331 aa11.95□□□□□ -0.5
LIG1-218ENST00000599322 TMEM158Q8WZ71 300 aa11.95□□□□□ -0.5
LIG1-218ENST00000599322 UTP4Q969X6 686 aaKnown RBP11.95□□□□□ -0.5
LIG1-218ENST00000599322 FN3KRPQ9HA64 309 aa11.95□□□□□ -0.5
LIG1-218ENST00000599322 GCM1Q9NP62 436 aa11.95□□□□□ -0.5
LIG1-218ENST00000599322 C14orf119Q9NWQ9 140 aa11.95□□□□□ -0.5
LIG1-218ENST00000599322 METRNQ9UJH8 293 aa11.95□□□□□ -0.5
LIG1-218ENST00000599322 ORC6Q9Y5N6 252 aa11.95□□□□□ -0.5
LIG1-218ENST00000599322 TMEM14AQ9Y6G1 99 aa11.95□□□□□ -0.5
LIG1-218ENST00000599322 RNF212BA8MTL3 300 aa11.94□□□□□ -0.5
LIG1-218ENST00000599322 F5H5P2 479 aa11.94□□□□□ -0.5
LIG1-218ENST00000599322 TMEM178BH3BS89 294 aa11.94□□□□□ -0.5
LIG1-218ENST00000599322 J3QLI3 93 aa11.94□□□□□ -0.5
LIG1-218ENST00000599322 EBAG9O00559 213 aa11.94□□□□□ -0.5
LIG1-218ENST00000599322 PNPP00491 289 aa11.94□□□□□ -0.5
LIG1-218ENST00000599322 GNALP38405 381 aa11.94□□□□□ -0.5
LIG1-218ENST00000599322 DAPP51397 102 aa11.94□□□□□ -0.5
LIG1-218ENST00000599322 ACTR3P61158 418 aa11.94□□□□□ -0.5
LIG1-218ENST00000599322 ZNF92Q03936 586 aa11.94□□□□□ -0.5
LIG1-218ENST00000599322 APOFQ13790 326 aa11.94□□□□□ -0.5
LIG1-218ENST00000599322 PTGES3Q15185 160 aaKnown RBP11.94□□□□□ -0.5
LIG1-218ENST00000599322 KCNJ8Q15842 424 aa11.94□□□□□ -0.5
LIG1-218ENST00000599322 SNAI3Q3KNW1 292 aa11.94□□□□□ -0.5
LIG1-218ENST00000599322 GLYATL3Q5SZD4 288 aa11.94□□□□□ -0.5
LIG1-218ENST00000599322 DCAF12L2Q5VW00 463 aa11.94□□□□□ -0.5
LIG1-218ENST00000599322 TMEM236Q5W0B7 351 aa11.94□□□□□ -0.5
LIG1-218ENST00000599322 FAHD1Q6P587 224 aa11.94□□□□□ -0.5
LIG1-218ENST00000599322 ZNF771Q7L3S4 317 aaPredicted RBP11.94□□□□□ -0.5
LIG1-218ENST00000599322 MOGAT3Q86VF5 341 aa11.94□□□□□ -0.5
LIG1-218ENST00000599322 LRRC28Q86X40 367 aaPredicted RBP11.94□□□□□ -0.5
LIG1-218ENST00000599322 PHC2Q8IXK0 858 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms