RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 OMGP23515 440 aa11.83□□□□□ -0.52
SHKBP1-218ENST00000598907 PRTN3P24158 256 aa11.83□□□□□ -0.52
SHKBP1-218ENST00000598907 GUCA1AP43080 201 aaPredicted RBP11.83□□□□□ -0.52
SHKBP1-218ENST00000598907 HIST1H3AP68431 136 aa11.83□□□□□ -0.52
SHKBP1-218ENST00000598907 HIST2H3PS2Q5TEC6 136 aa11.83□□□□□ -0.52
SHKBP1-218ENST00000598907 OTPQ5XKR4 325 aa11.83□□□□□ -0.52
SHKBP1-218ENST00000598907 HIST2H3AQ71DI3 136 aa11.83□□□□□ -0.52
SHKBP1-218ENST00000598907 SHFQ7M4L6 423 aa11.83□□□□□ -0.52
SHKBP1-218ENST00000598907 SYT9Q86SS6 491 aa11.83□□□□□ -0.52
SHKBP1-218ENST00000598907 ERI1Q8IV48 349 aaKnown RBP11.83□□□□□ -0.52
SHKBP1-218ENST00000598907 SKA3Q8IX90 412 aa11.83□□□□□ -0.52
SHKBP1-218ENST00000598907 OR4M2Q8NGB6 313 aa11.83□□□□□ -0.52
SHKBP1-218ENST00000598907 IPCEF1Q8WWN9 437 aaPredicted RBP11.83□□□□□ -0.52
SHKBP1-218ENST00000598907 NR1H4Q96RI1 486 aaPredicted RBP11.83□□□□□ -0.52
SHKBP1-218ENST00000598907 CNN2Q99439 309 aaKnown RBP11.83□□□□□ -0.52
SHKBP1-218ENST00000598907 MNTQ99583 582 aa11.83□□□□□ -0.52
SHKBP1-218ENST00000598907 ZNF649Q9BS31 505 aa11.83□□□□□ -0.52
SHKBP1-218ENST00000598907 MYRFQ9Y2G1 1151 aa11.83□□□□□ -0.52
SHKBP1-218ENST00000598907 LHFPL6Q9Y693 200 aa11.83□□□□□ -0.52
SHKBP1-218ENST00000598907 ARPC4-TTLL3A0A0A6YYG9 625 aa11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 APOL3O95236 402 aa11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 FARS2O95363 451 aaKnown RBP11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 MRPL3P09001 348 aaKnown RBP11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 OR2T7P0C7T2 308 aa11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 ZNF823P16415 610 aa11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 ALOX5APP20292 161 aa11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 FPR2P25090 351 aa11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 GCH1P30793 250 aa11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 NAA10P41227 235 aaPredicted RBP11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 GABARAPL2P60520 117 aa11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 MVKQ03426 396 aa11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 ST3GAL4Q11206 333 aa11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 TBRG1Q3YBR2 411 aa11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 KCTD21Q4G0X4 260 aa11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 C1QTNF12Q5T7M4 302 aa11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 RNLSQ5VYX0 342 aa11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 SLC18B1Q6NT16 456 aa11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 DPY19L4Q7Z388 723 aa11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 SLC35F2Q8IXU6 374 aa11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 CCDC36Q8IYA8 594 aa11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 OR2T27Q8NH04 317 aa11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 OTOSQ8NHW6 89 aa11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 FGFBP3Q8TAT2 258 aa11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 SGCDQ92629 289 aa11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 SH3GL3Q99963 347 aa11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 B3GNT2Q9NY97 397 aa11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 DIMT1Q9UNQ2 313 aaKnown RBP11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 COPS3Q9UNS2 423 aa11.82□□□□□ -0.52
SHKBP1-218ENST00000598907 A0A096LPE4 126 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 A0A1W2PPZ6 126 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 ZNF503-AS2A6NEH8 195 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 C12orf71A8MTZ7 269 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 PTGES3LE9PB15 166 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 PIN1P1O15428 100 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 PPIHO43447 177 aaKnown RBP11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 MRPS14O60783 128 aaKnown RBP11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 RAB36O95755 333 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 FADS2O95864 444 aaKnown RBP11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 CDK1P06493 297 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 HTR1AP08908 422 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 VSIG8P0DPA2 414 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 DCKP27707 260 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 THBS4P35443 961 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 RPS27P42677 84 aaKnown RBP11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 HCCSP53701 268 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 TUBA1BP68363 451 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 TUBA4AP68366 448 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 ZNF85Q03923 595 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 AQP6Q13520 282 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 AHSA2Q719I0 299 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 TUBA1AQ71U36 451 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 SLC16A14Q7RTX9 510 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 DPPA2Q7Z7J5 298 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 LRRC18Q8N456 261 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 ACBD7Q8N6N7 88 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 ZNF454Q8N9F8 522 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 OR6N2Q8NGY6 317 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 ST7LQ8TDW4 575 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 TMEM80Q96HE8 168 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 ZNF75AQ96N20 296 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 DOK1Q99704 481 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 COPS4Q9BT78 406 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 OBP2BQ9NPH6 170 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 INPP5EQ9NRR6 644 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 ERVK-18Q9QC07 812 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 ASH2LQ9UBL3 628 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 BLOC1S6Q9UL45 172 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 KLHDC2Q9Y2U9 406 aa11.81□□□□□ -0.52
SHKBP1-218ENST00000598907 M0QZ24 198 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 TNFAIP8O95379 198 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 SPARCP09486 303 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 LIMS3P0CW19 117 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 LIMS4P0CW20 117 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 CALCRP30988 508 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 ATP6V1E1P36543 226 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 PCBD1P61457 104 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 LMO4P61968 165 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 ACTC1P68032 377 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 ACTA1P68133 377 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 NAAAQ02083 359 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms