RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 KRT33AO76009 404 aa14.96□□□□□ -0.02
SHKBP1-216ENST00000598201 MT-ND4P03905 459 aa14.96□□□□□ -0.02
SHKBP1-216ENST00000598201 DBHP09172 617 aa14.96□□□□□ -0.02
SHKBP1-216ENST00000598201 RAB25P57735 213 aa14.96□□□□□ -0.02
SHKBP1-216ENST00000598201 HYAL4Q2M3T9 481 aa14.96□□□□□ -0.02
SHKBP1-216ENST00000598201 C1orf100Q5SVJ3 147 aa14.96□□□□□ -0.02
SHKBP1-216ENST00000598201 ZNF529Q6P280 563 aa14.96□□□□□ -0.02
SHKBP1-216ENST00000598201 ZFP62Q8NB50 900 aaPredicted RBP14.96□□□□□ -0.02
SHKBP1-216ENST00000598201 OR1M1Q8NGA1 313 aa14.96□□□□□ -0.02
SHKBP1-216ENST00000598201 OR13C9Q8NGT0 318 aa14.96□□□□□ -0.02
SHKBP1-216ENST00000598201 OR6F1Q8NGZ6 308 aa14.96□□□□□ -0.02
SHKBP1-216ENST00000598201 CPT1CQ8TCG5 803 aa14.96□□□□□ -0.02
SHKBP1-216ENST00000598201 UBASH3BQ8TF42 649 aa14.96□□□□□ -0.02
SHKBP1-216ENST00000598201 MYEF2Q9P2K5 600 aaKnown RBP14.96□□□□□ -0.02
SHKBP1-216ENST00000598201 RBMX2Q9Y388 322 aaKnown RBP14.96□□□□□ -0.02
SHKBP1-216ENST00000598201 LIPGQ9Y5X9 500 aa14.96□□□□□ -0.02
SHKBP1-216ENST00000598201 ALG5Q9Y673 324 aa14.96□□□□□ -0.02
SHKBP1-216ENST00000598201 LOC400499M0QZD8 3231 aa14.95□□□□□ -0.02
SHKBP1-216ENST00000598201 DNAJC13O75165 2243 aa14.95□□□□□ -0.02
SHKBP1-216ENST00000598201 GGT3PA6NGU5 568 aa14.95□□□□□ -0.02
SHKBP1-216ENST00000598201 B4GALT1P15291 398 aa14.95□□□□□ -0.02
SHKBP1-216ENST00000598201 CD46P15529 392 aa14.95□□□□□ -0.02
SHKBP1-216ENST00000598201 ARSBP15848 533 aa14.95□□□□□ -0.02
SHKBP1-216ENST00000598201 CCL1P22362 96 aa14.95□□□□□ -0.02
SHKBP1-216ENST00000598201 BDKRB2P30411 391 aa14.95□□□□□ -0.02
SHKBP1-216ENST00000598201 RRADP55042 308 aa14.95□□□□□ -0.02
SHKBP1-216ENST00000598201 ARG2P78540 354 aa14.95□□□□□ -0.02
SHKBP1-216ENST00000598201 C3AR1Q16581 482 aa14.95□□□□□ -0.02
SHKBP1-216ENST00000598201 CEACAM16Q2WEN9 425 aa14.95□□□□□ -0.02
SHKBP1-216ENST00000598201 RNFT1Q5M7Z0 435 aa14.95□□□□□ -0.02
SHKBP1-216ENST00000598201 RNF144BQ7Z419 303 aa14.95□□□□□ -0.02
SHKBP1-216ENST00000598201 NKAIN3Q8N8D7 197 aa14.95□□□□□ -0.02
SHKBP1-216ENST00000598201 FCAMRQ8WWV6 532 aa14.95□□□□□ -0.02
SHKBP1-216ENST00000598201 HAS2Q92819 552 aa14.95□□□□□ -0.02
SHKBP1-216ENST00000598201 LYZL4Q96KX0 146 aa14.95□□□□□ -0.02
SHKBP1-216ENST00000598201 PLEK2Q9NYT0 353 aa14.95□□□□□ -0.02
SHKBP1-216ENST00000598201 CFAP47Q6ZTR5 3102 aa14.95□□□□□ -0.02
SHKBP1-216ENST00000598201 IGKV3D-15A0A087WSY6 115 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 HMX3A6NHT5 357 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 A8MV72 311 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 INMT-MINDY4F8WBC2 141 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 LDLRAD4O15165 306 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 IGHV3-9P01782 118 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 PATE4P0C8F1 98 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 GIFP27352 417 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 OTX1P32242 354 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 CCR6P51684 374 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 TMEM255AQ5JRV8 349 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 OR10K2Q6IF99 312 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 OR5D14Q8NGL3 314 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 CREB3L1Q96BA8 519 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 ARPC5LQ9BPX5 153 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 CNTD2Q9H8S5 307 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 GPR35Q9HC97 309 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 ZNF891A8MT65 544 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 ZNF20P17024 532 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 SLC6A9P48067 706 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 SNTB2Q13425 540 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 DYRK1AQ13627 763 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 ZNF766Q5HY98 468 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 DNM1P46Q6ZS02 220 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 FNDC9Q8TBE3 224 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 TMEM45BQ96B21 275 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 SCMH1Q96GD3 660 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 PGAM5Q96HS1 289 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 ST6GAL2Q96JF0 529 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 GAL3ST1Q99999 423 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 ATG5Q9H1Y0 275 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 TMEM138Q9NPI0 162 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 SLC17A5Q9NRA2 495 aa14.94□□□□□ -0.02
SHKBP1-216ENST00000598201 CENPXA8MT69 81 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 ACOT7O00154 380 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 IGLV3-1P01715 115 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 CST2P09228 141 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 CCL11P51671 97 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 BCL2A1Q16548 175 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 RIPPLY2Q5TAB7 128 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 TSPO2Q5TGU0 170 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 TMEM53Q6P2H8 277 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 MEIOBQ8N635 442 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 FGFBP3Q8TAT2 258 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 FOXB1Q99853 325 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 DEFB127Q9H1M4 99 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 DPAGT1Q9H3H5 408 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 NUDT15Q9NV35 164 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 NOSIPQ9Y314 301 aaKnown RBP14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 TRAV6A0A075B6T7 132 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 TRAV18A0A075B6X5 111 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 M0R135 149 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 GMDSO60547 372 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 TCRBP04435 133 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 RAB3AP20336 220 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 HLA-DMAP28067 261 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 MRPS10P82664 201 aaKnown RBP14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 SLC10A1Q14973 349 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 TBRG1Q3YBR2 411 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 ATAD3CQ5T2N8 411 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 ZNF774Q6NX45 483 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 DOK3Q7L591 496 aa14.93□□□□□ -0.02
SHKBP1-216ENST00000598201 ADGRE4PQ86SQ3 457 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms