RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 TACSTD2P09758 323 aa16.39■□□□□ 0.21
DDX39A-214ENST00000590556 ANOS1P23352 680 aa16.39■□□□□ 0.21
DDX39A-214ENST00000590556 ALDH3B1P43353 468 aa16.39■□□□□ 0.21
DDX39A-214ENST00000590556 ZNF92Q03936 586 aa16.39■□□□□ 0.21
DDX39A-214ENST00000590556 GALEQ14376 348 aa16.39■□□□□ 0.21
DDX39A-214ENST00000590556 GK2Q14410 553 aaPredicted RBP16.39■□□□□ 0.21
DDX39A-214ENST00000590556 DEFB113Q30KQ7 82 aa16.39■□□□□ 0.21
DDX39A-214ENST00000590556 ALKBH6Q3KRA9 238 aa16.39■□□□□ 0.21
DDX39A-214ENST00000590556 CDONQ4KMG0 1287 aa16.39■□□□□ 0.21
DDX39A-214ENST00000590556 TP53I3Q53FA7 332 aa16.39■□□□□ 0.21
DDX39A-214ENST00000590556 MRPL21Q7Z2W9 205 aaKnown RBP16.39■□□□□ 0.21
DDX39A-214ENST00000590556 KCTD20Q7Z5Y7 419 aa16.39■□□□□ 0.21
DDX39A-214ENST00000590556 OR2AE1Q8NHA4 323 aa16.39■□□□□ 0.21
DDX39A-214ENST00000590556 TMEM80Q96HE8 168 aa16.39■□□□□ 0.21
DDX39A-214ENST00000590556 RHNO1Q9BSD3 238 aa16.39■□□□□ 0.21
DDX39A-214ENST00000590556 ALG8Q9BVK2 526 aa16.39■□□□□ 0.21
DDX39A-214ENST00000590556 FAM206AQ9NX38 181 aa16.39■□□□□ 0.21
DDX39A-214ENST00000590556 ERVK13-1Q9NX77 482 aa16.39■□□□□ 0.21
DDX39A-214ENST00000590556 CNOT2Q9NZN8 540 aaKnown RBP16.39■□□□□ 0.21
DDX39A-214ENST00000590556 PSORS1C1Q9UIG5 152 aa16.39■□□□□ 0.21
DDX39A-214ENST00000590556 PURGQ9UJV8 347 aaKnown RBP16.39■□□□□ 0.21
DDX39A-214ENST00000590556 R4GMQ9 66 aa16.39■□□□□ 0.21
DDX39A-214ENST00000590556 RPP14O95059 124 aaKnown RBP16.38■□□□□ 0.21
DDX39A-214ENST00000590556 ADRA2AP08913 450 aa16.38■□□□□ 0.21
DDX39A-214ENST00000590556 PIPP12273 146 aaPredicted RBP16.38■□□□□ 0.21
DDX39A-214ENST00000590556 KITLGP21583 273 aa16.38■□□□□ 0.21
DDX39A-214ENST00000590556 PPOXP50336 477 aa16.38■□□□□ 0.21
DDX39A-214ENST00000590556 MMP16P51512 607 aa16.38■□□□□ 0.21
DDX39A-214ENST00000590556 ACTA2P62736 377 aa16.38■□□□□ 0.21
DDX39A-214ENST00000590556 ACTG2P63267 376 aa16.38■□□□□ 0.21
DDX39A-214ENST00000590556 ST3GAL4Q11206 333 aa16.38■□□□□ 0.21
DDX39A-214ENST00000590556 TIGD6Q17RP2 521 aa16.38■□□□□ 0.21
DDX39A-214ENST00000590556 TMEM255AQ5JRV8 349 aa16.38■□□□□ 0.21
DDX39A-214ENST00000590556 LIPNQ5VXI9 398 aa16.38■□□□□ 0.21
DDX39A-214ENST00000590556 PGAP1Q75T13 922 aa16.38■□□□□ 0.21
DDX39A-214ENST00000590556 SGK3Q96BR1 496 aa16.38■□□□□ 0.21
DDX39A-214ENST00000590556 TRMT61AQ96FX7 289 aaKnown RBP16.38■□□□□ 0.21
DDX39A-214ENST00000590556 VRK1Q99986 396 aaPredicted RBP16.38■□□□□ 0.21
DDX39A-214ENST00000590556 JAM3Q9BX67 310 aa16.38■□□□□ 0.21
DDX39A-214ENST00000590556 ZNF701Q9NV72 531 aaPredicted RBP16.38■□□□□ 0.21
DDX39A-214ENST00000590556 SCN3BQ9NY72 215 aa16.38■□□□□ 0.21
DDX39A-214ENST00000590556 ZNF319Q9P2F9 582 aa16.38■□□□□ 0.21
DDX39A-214ENST00000590556 GTF2A1LQ9UNN4 478 aa16.38■□□□□ 0.21
DDX39A-214ENST00000590556 DIMT1Q9UNQ2 313 aaKnown RBP16.38■□□□□ 0.21
DDX39A-214ENST00000590556 ARID1AO14497 2285 aa16.38■□□□□ 0.21
DDX39A-214ENST00000590556 CCDC168Q8NDH2 2452 aa16.37■□□□□ 0.21
DDX39A-214ENST00000590556 PLSCR5A0PG75 271 aa16.37■□□□□ 0.21
DDX39A-214ENST00000590556 LOC110117498-PIK3R3F6TDL0 507 aa16.37■□□□□ 0.21
DDX39A-214ENST00000590556 H7C417 338 aa16.37■□□□□ 0.21
DDX39A-214ENST00000590556 J3QLW9 94 aa16.37■□□□□ 0.21
DDX39A-214ENST00000590556 SLC1A7O00341 560 aa16.37■□□□□ 0.21
DDX39A-214ENST00000590556 DENRO43583 198 aaKnown RBP16.37■□□□□ 0.21
DDX39A-214ENST00000590556 SRSF10O75494 262 aaKnown RBP16.37■□□□□ 0.21
DDX39A-214ENST00000590556 PNPP00491 289 aa16.37■□□□□ 0.21
DDX39A-214ENST00000590556 MT-ND5P03915 603 aa16.37■□□□□ 0.21
DDX39A-214ENST00000590556 SELEP16581 610 aa16.37■□□□□ 0.21
DDX39A-214ENST00000590556 ZNF19P17023 458 aa16.37■□□□□ 0.21
DDX39A-214ENST00000590556 MYL12AP19105 171 aa16.37■□□□□ 0.21
DDX39A-214ENST00000590556 OR12D2P58182 307 aa16.37■□□□□ 0.21
DDX39A-214ENST00000590556 MFGE8Q08431 387 aaPredicted RBP16.37■□□□□ 0.21
DDX39A-214ENST00000590556 MED21Q13503 144 aa16.37■□□□□ 0.21
DDX39A-214ENST00000590556 GFOD2Q3B7J2 385 aa16.37■□□□□ 0.21
DDX39A-214ENST00000590556 OR2T2Q6IF00 324 aa16.37■□□□□ 0.21
DDX39A-214ENST00000590556 AHSA2Q719I0 299 aa16.37■□□□□ 0.21
DDX39A-214ENST00000590556 ZNF540Q8NDQ6 660 aa16.37■□□□□ 0.21
DDX39A-214ENST00000590556 OR8B12Q8NGG6 310 aa16.37■□□□□ 0.21
DDX39A-214ENST00000590556 REEP6Q96HR9 211 aa16.37■□□□□ 0.21
DDX39A-214ENST00000590556 SIGLEC11Q96RL6 698 aa16.37■□□□□ 0.21
DDX39A-214ENST00000590556 REPIN1Q9BWE0 567 aaKnown RBP16.37■□□□□ 0.21
DDX39A-214ENST00000590556 PBOV1Q9GZY1 135 aa16.37■□□□□ 0.21
DDX39A-214ENST00000590556 MS4A5Q9H3V2 200 aa16.37■□□□□ 0.21
DDX39A-214ENST00000590556 OPA3Q9H6K4 179 aa16.37■□□□□ 0.21
DDX39A-214ENST00000590556 MOB1AQ9H8S9 216 aa16.37■□□□□ 0.21
DDX39A-214ENST00000590556 CHCHD3Q9NX63 227 aaKnown RBP16.37■□□□□ 0.21
DDX39A-214ENST00000590556 EXOSC1Q9Y3B2 195 aaKnown RBP16.37■□□□□ 0.21
DDX39A-214ENST00000590556 SNX5Q9Y5X3 404 aa16.37■□□□□ 0.21
DDX39A-214ENST00000590556 LIMS3P0CW19 117 aa16.36■□□□□ 0.21
DDX39A-214ENST00000590556 LIMS4P0CW20 117 aa16.36■□□□□ 0.21
DDX39A-214ENST00000590556 NAT2P11245 290 aa16.36■□□□□ 0.21
DDX39A-214ENST00000590556 PAX1P15863 534 aa16.36■□□□□ 0.21
DDX39A-214ENST00000590556 CFL1P23528 166 aaKnown RBP16.36■□□□□ 0.21
DDX39A-214ENST00000590556 PTH2RP49190 550 aa16.36■□□□□ 0.21
DDX39A-214ENST00000590556 ETV1P50549 477 aa16.36■□□□□ 0.21
DDX39A-214ENST00000590556 PRSS12P56730 875 aa16.36■□□□□ 0.21
DDX39A-214ENST00000590556 BCL2L15Q5TBC7 163 aa16.36■□□□□ 0.21
DDX39A-214ENST00000590556 EGFL6Q8IUX8 553 aa16.36■□□□□ 0.21
DDX39A-214ENST00000590556 OR5AS1Q8N127 324 aa16.36■□□□□ 0.21
DDX39A-214ENST00000590556 SYS1Q8N2H4 156 aa16.36■□□□□ 0.21
DDX39A-214ENST00000590556 STX19Q8N4C7 294 aa16.36■□□□□ 0.21
DDX39A-214ENST00000590556 RORBQ92753 470 aa16.36■□□□□ 0.21
DDX39A-214ENST00000590556 SPSB4Q96A44 273 aa16.36■□□□□ 0.21
DDX39A-214ENST00000590556 PERPQ96FX8 193 aa16.36■□□□□ 0.21
DDX39A-214ENST00000590556 C4orf36Q96KX1 117 aa16.36■□□□□ 0.21
DDX39A-214ENST00000590556 ZNF649Q9BS31 505 aa16.36■□□□□ 0.21
DDX39A-214ENST00000590556 GSX2Q9BZM3 304 aa16.36■□□□□ 0.21
DDX39A-214ENST00000590556 RGCCQ9H4X1 137 aa16.36■□□□□ 0.21
DDX39A-214ENST00000590556 CYSLTR2Q9NS75 346 aa16.36■□□□□ 0.21
DDX39A-214ENST00000590556 ACOXLQ9NUZ1 547 aa16.36■□□□□ 0.21
DDX39A-214ENST00000590556 CGGBP1Q9UFW8 167 aaPredicted RBP16.36■□□□□ 0.21
DDX39A-214ENST00000590556 NUFIP1Q9UHK0 495 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms