RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 MARCH7Q9H992 704 aa6.63□□□□□ -1.35
SMAD4-209ENST00000589941 LYRM4Q9HD34 91 aa6.63□□□□□ -1.35
SMAD4-209ENST00000589941 MAN2C1Q9NTJ4 1040 aa6.63□□□□□ -1.35
SMAD4-209ENST00000589941 MRPL39Q9NYK5 338 aaKnown RBP6.63□□□□□ -1.35
SMAD4-209ENST00000589941 CLEC2DQ9UHP7 191 aa6.63□□□□□ -1.35
SMAD4-209ENST00000589941 TMCC3Q9ULS5 477 aa6.63□□□□□ -1.35
SMAD4-209ENST00000589941 EXOSC1Q9Y3B2 195 aaKnown RBP6.63□□□□□ -1.35
SMAD4-209ENST00000589941 CCDC182A6NF36 153 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 GLOD5A6NK44 160 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 TPD52L2O43399 206 aaKnown RBP6.62□□□□□ -1.35
SMAD4-209ENST00000589941 CDRT1O95170 752 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 ANXA2P07355 339 aaKnown RBP6.62□□□□□ -1.35
SMAD4-209ENST00000589941 IL3P08700 152 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 ACP2P11117 423 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 PGCP20142 388 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 GSTM3P21266 225 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 ATP5A1P25705 553 aaKnown RBP6.62□□□□□ -1.35
SMAD4-209ENST00000589941 GIFP27352 417 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 GCH1P30793 250 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 CHI3L1P36222 383 aaPredicted RBP6.62□□□□□ -1.35
SMAD4-209ENST00000589941 ZNF83P51522 516 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 BTG1P62324 171 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 TRA2BP62995 288 aaKnown RBP6.62□□□□□ -1.35
SMAD4-209ENST00000589941 BDH1Q02338 343 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 PLCXD2Q0VAA5 305 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 HIST2H2AA3Q6FI13 130 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 CASP12Q6UXS9 341 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 ZNF788Q6ZQV5 615 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 ZNF767PQ75MW2 155 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 RNF152Q8N8N0 203 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 ACOT4Q8N9L9 421 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 OR4D11Q8NGI4 311 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 CDC26Q8NHZ8 85 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 VANGL1Q8TAA9 524 aaPredicted RBP6.62□□□□□ -1.35
SMAD4-209ENST00000589941 SLC7A13Q8TCU3 470 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 RIT1Q92963 219 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 TMEM186Q96B77 213 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 TMEM19Q96HH6 336 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 KCTD7Q96MP8 289 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 NPAS1Q99742 590 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 ZNF649Q9BS31 505 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 MARVELD1Q9BSK0 173 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 NDEL1Q9GZM8 345 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 POLR2J3Q9H1A7 115 aaKnown RBP6.62□□□□□ -1.35
SMAD4-209ENST00000589941 ANKRD19PQ9H560 264 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 ANKRA2Q9H9E1 313 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 ABCB9Q9NP78 766 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 DIABLOQ9NR28 239 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 SNTG1Q9NSN8 517 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 RBFOX1Q9NWB1 397 aaKnown RBP6.62□□□□□ -1.35
SMAD4-209ENST00000589941 GAR1Q9NY12 217 aaKnown RBP6.62□□□□□ -1.35
SMAD4-209ENST00000589941 DNAJC27Q9NZQ0 273 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 MOKQ9UQ07 419 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 SNX8Q9Y5X2 465 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 AUP1Q9Y679 476 aa6.62□□□□□ -1.35
SMAD4-209ENST00000589941 NOTCH3Q9UM47 2321 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 DNAH7Q8WXX0 4024 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 A0A1W2PQL4 384 aaPredicted RBP6.61□□□□□ -1.35
SMAD4-209ENST00000589941 FABP12A6NFH5 140 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 ZNF814B7Z6K7 855 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 LYNX1G3V0Z9 82 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 AP4M1O00189 453 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 SAP18O00422 153 aaKnown RBP6.61□□□□□ -1.35
SMAD4-209ENST00000589941 HMGN4O00479 90 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 WNT9BO14905 357 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 MYL12BO14950 172 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 PRKYO43930 277 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 ZNF780AO75290 641 aaPredicted RBP6.61□□□□□ -1.35
SMAD4-209ENST00000589941 NME6O75414 186 aaPredicted RBP6.61□□□□□ -1.35
SMAD4-209ENST00000589941 RBMXL2O75526 392 aaKnown RBP6.61□□□□□ -1.35
SMAD4-209ENST00000589941 OPN1LWP04000 364 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 NHLRC4P0CG21 123 aaPredicted RBP6.61□□□□□ -1.35
SMAD4-209ENST00000589941 LIMS3P0CW19 117 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 LIMS4P0CW20 117 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 LYNX1P0DP58 116 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 ZNF10P21506 573 aaPredicted RBP6.61□□□□□ -1.35
SMAD4-209ENST00000589941 PRKAR1BP31321 381 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 SDC2P34741 201 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 BSGP35613 385 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 EVX1P49640 407 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 ETV1P50549 477 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 RAB25P57735 213 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 MRPS15P82914 257 aaKnown RBP6.61□□□□□ -1.35
SMAD4-209ENST00000589941 TNFRSF17Q02223 184 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 HNRNPA0Q13151 305 aaKnown RBP6.61□□□□□ -1.35
SMAD4-209ENST00000589941 SNTA1Q13424 505 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 GANABQ14697 944 aaKnown RBP6.61□□□□□ -1.35
SMAD4-209ENST00000589941 QPRTQ15274 297 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 SGCBQ16585 318 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 LCN1P1Q5VSP4 162 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 HACD4Q5VWC8 232 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 FAM131AQ6UXB0 335 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 TMIGD1Q6UXZ0 262 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 CREB3L2Q70SY1 520 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 C1QL2Q7Z5L3 287 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 ZNF575Q86XF7 245 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 SIGLECL1Q8N7X8 197 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 TCEANCQ8N8B7 351 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 OR52N1Q8NH53 320 aa6.61□□□□□ -1.35
SMAD4-209ENST00000589941 OR10D3Q8NH80 312 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms