RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 AMELYQ99218 206 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 OR10A4Q9H209 315 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 NEK6Q9HC98 313 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 FAM206AQ9NX38 181 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 ELOVL5Q9NYP7 299 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 FRRS1LQ9P0K9 344 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 OR52A1Q9UKL2 312 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 KLF2Q9Y5W3 355 aaPredicted RBP11.01□□□□□ -0.65
VMP1-202ENST00000585847 PEX16Q9Y5Y5 336 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 CSMD1Q96PZ7 3565 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 APCP25054 2843 aa11.01□□□□□ -0.65
VMP1-202ENST00000585847 PNMA8CA0A1B0GUJ8 204 aa11□□□□□ -0.65
VMP1-202ENST00000585847 LOC390937A0A1W2PQ73 354 aa11□□□□□ -0.65
VMP1-202ENST00000585847 MEGF11A6BM72 1044 aa11□□□□□ -0.65
VMP1-202ENST00000585847 PRR32B1ATL7 298 aa11□□□□□ -0.65
VMP1-202ENST00000585847 CASKO14936 926 aa11□□□□□ -0.65
VMP1-202ENST00000585847 RER1O15258 196 aa11□□□□□ -0.65
VMP1-202ENST00000585847 SYNGR3O43761 229 aa11□□□□□ -0.65
VMP1-202ENST00000585847 DOK2O60496 412 aa11□□□□□ -0.65
VMP1-202ENST00000585847 MTRF1O75570 445 aaKnown RBP11□□□□□ -0.65
VMP1-202ENST00000585847 RPP14O95059 124 aaKnown RBP11□□□□□ -0.65
VMP1-202ENST00000585847 GPANK1O95872 356 aa11□□□□□ -0.65
VMP1-202ENST00000585847 ERCC1P07992 297 aaPredicted RBP11□□□□□ -0.65
VMP1-202ENST00000585847 MMP7P09237 267 aaPredicted RBP11□□□□□ -0.65
VMP1-202ENST00000585847 OCM2P0CE71 109 aa11□□□□□ -0.65
VMP1-202ENST00000585847 PRF1P14222 555 aa11□□□□□ -0.65
VMP1-202ENST00000585847 CRYGSP22914 178 aa11□□□□□ -0.65
VMP1-202ENST00000585847 TUBG1P23258 451 aa11□□□□□ -0.65
VMP1-202ENST00000585847 S100A5P33763 92 aa11□□□□□ -0.65
VMP1-202ENST00000585847 NANOS3P60323 173 aaKnown RBP11□□□□□ -0.65
VMP1-202ENST00000585847 GABRA6Q16445 453 aa11□□□□□ -0.65
VMP1-202ENST00000585847 KRTAP27-1Q3LI81 207 aa11□□□□□ -0.65
VMP1-202ENST00000585847 ZFP41Q8N8Y5 198 aa11□□□□□ -0.65
VMP1-202ENST00000585847 IL17RDQ8NFM7 739 aa11□□□□□ -0.65
VMP1-202ENST00000585847 OR1K1Q8NGR3 316 aa11□□□□□ -0.65
VMP1-202ENST00000585847 NDNFQ8TB73 568 aa11□□□□□ -0.65
VMP1-202ENST00000585847 SMAP2Q8WU79 429 aaPredicted RBP11□□□□□ -0.65
VMP1-202ENST00000585847 TMEM203Q969S6 136 aa11□□□□□ -0.65
VMP1-202ENST00000585847 RNF166Q96A37 237 aaPredicted RBP11□□□□□ -0.65
VMP1-202ENST00000585847 DCUN1D5Q9BTE7 237 aa11□□□□□ -0.65
VMP1-202ENST00000585847 OR2H1Q9GZK4 316 aa11□□□□□ -0.65
VMP1-202ENST00000585847 SLIRPQ9GZT3 109 aaKnown RBP11□□□□□ -0.65
VMP1-202ENST00000585847 NXF2Q9GZY0 626 aaKnown RBP11□□□□□ -0.65
VMP1-202ENST00000585847 TUBG2Q9NRH3 451 aa11□□□□□ -0.65
VMP1-202ENST00000585847 DHDHQ9UQ10 334 aa11□□□□□ -0.65
VMP1-202ENST00000585847 GRIP1Q9Y3R0 1128 aa11□□□□□ -0.65
VMP1-202ENST00000585847 SIRT4Q9Y6E7 314 aaPredicted RBP11□□□□□ -0.65
VMP1-202ENST00000585847 FBN2P35556 2912 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 A0A1B0GVI7 797 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 M0R135 149 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 ICMTO60725 284 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 THBDP07204 575 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 PSKH1P11801 424 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 CALRP27797 417 aaKnown RBP10.99□□□□□ -0.65
VMP1-202ENST00000585847 RPS27P42677 84 aaKnown RBP10.99□□□□□ -0.65
VMP1-202ENST00000585847 CX3CR1P49238 355 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 UBE2NP61088 152 aaKnown RBP10.99□□□□□ -0.65
VMP1-202ENST00000585847 RPS11P62280 158 aaKnown RBP eCLIP10.99□□□□□ -0.65
VMP1-202ENST00000585847 LSM3P62310 102 aaKnown RBP10.99□□□□□ -0.65
VMP1-202ENST00000585847 DOC2BQ14184 412 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 C3orf36Q3SXR2 165 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 MZT2AQ6P582 158 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 SEZ6L2Q6UXD5 910 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 TMEM91Q6ZNR0 172 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 DOK3Q7L591 496 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 BHLHA15Q7RTS1 189 aaPredicted RBP10.99□□□□□ -0.65
VMP1-202ENST00000585847 ZNF283Q8N7M2 679 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 NKAIN3Q8N8D7 197 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 WDR31Q8NA23 367 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 OR10S1Q8NGN2 331 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 OR1J2Q8NGS2 313 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 MCFD2Q8NI22 146 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 TSEN15Q8WW01 171 aaKnown RBP10.99□□□□□ -0.65
VMP1-202ENST00000585847 HTRA1Q92743 480 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 BCL2L2Q92843 193 aaPredicted RBP10.99□□□□□ -0.65
VMP1-202ENST00000585847 CPNE2Q96FN4 548 aaPredicted RBP10.99□□□□□ -0.65
VMP1-202ENST00000585847 ZNF799Q96GE5 643 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 CMTM3Q96MX0 182 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 FOXN4Q96NZ1 517 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 TECTBQ96PL2 329 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 DERL3Q96Q80 235 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 PBOV1Q9GZY1 135 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 OR10A2Q9H208 303 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 TCF7L1Q9HCS4 588 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 HMG20AQ9NP66 347 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 G6PC2Q9NQR9 355 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 SLC17A5Q9NRA2 495 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 RABL2AQ9UBK7 228 aaPredicted RBP10.99□□□□□ -0.65
VMP1-202ENST00000585847 ADAM30Q9UKF2 790 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 RABL2BQ9UNT1 228 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 FOXJ3Q9UPW0 622 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 SLC22A13Q9Y226 551 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 AMDHD2Q9Y303 409 aa10.99□□□□□ -0.65
VMP1-202ENST00000585847 TRBV5-7A0A0A0MS05 114 aa10.98□□□□□ -0.65
VMP1-202ENST00000585847 LOC107986453A0A1B0GWG9 222 aa10.98□□□□□ -0.65
VMP1-202ENST00000585847 ZNF503-AS2A6NEH8 195 aa10.98□□□□□ -0.65
VMP1-202ENST00000585847 XRCC2O43543 280 aa10.98□□□□□ -0.65
VMP1-202ENST00000585847 RAD51DO75771 328 aa10.98□□□□□ -0.65
VMP1-202ENST00000585847 CDRT1O95170 752 aa10.98□□□□□ -0.65
VMP1-202ENST00000585847 WNT11O96014 354 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms