RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 CD40LGP29965 261 aa10.42□□□□□ -0.74
GGA3-217ENST00000583667 AGTR1P30556 359 aa10.42□□□□□ -0.74
GGA3-217ENST00000583667 S100A5P33763 92 aa10.42□□□□□ -0.74
GGA3-217ENST00000583667 PEX19P40855 299 aa10.42□□□□□ -0.74
GGA3-217ENST00000583667 MFGE8Q08431 387 aaPredicted RBP10.42□□□□□ -0.74
GGA3-217ENST00000583667 HNRNPA0Q13151 305 aaKnown RBP10.42□□□□□ -0.74
GGA3-217ENST00000583667 RSPO1Q2MKA7 263 aaPredicted RBP10.42□□□□□ -0.74
GGA3-217ENST00000583667 CCDC92Q53HC0 331 aaPredicted RBP10.42□□□□□ -0.74
GGA3-217ENST00000583667 ELFN2Q5R3F8 820 aa10.42□□□□□ -0.74
GGA3-217ENST00000583667 NSUN5P2Q63ZY6 315 aa10.42□□□□□ -0.74
GGA3-217ENST00000583667 PRSS45Q7RTY3 260 aa10.42□□□□□ -0.74
GGA3-217ENST00000583667 OR13C5Q8NGS8 318 aa10.42□□□□□ -0.74
GGA3-217ENST00000583667 FBXO17Q96EF6 278 aa10.42□□□□□ -0.74
GGA3-217ENST00000583667 OR14A2Q96R54 314 aa10.42□□□□□ -0.74
GGA3-217ENST00000583667 MRI1Q9BV20 369 aa10.42□□□□□ -0.74
GGA3-217ENST00000583667 TPK1Q9H3S4 243 aa10.42□□□□□ -0.74
GGA3-217ENST00000583667 NOX4Q9NPH5 578 aa10.42□□□□□ -0.74
GGA3-217ENST00000583667 COQ3Q9NZJ6 369 aa10.42□□□□□ -0.74
GGA3-217ENST00000583667 FBXL3Q9UKT7 428 aa10.42□□□□□ -0.74
GGA3-217ENST00000583667 HHLA2Q9UM44 414 aa10.42□□□□□ -0.74
GGA3-217ENST00000583667 EDARQ9UNE0 448 aa10.42□□□□□ -0.74
GGA3-217ENST00000583667 EMC9Q9Y3B6 208 aa10.42□□□□□ -0.74
GGA3-217ENST00000583667 NKX2-6A6NCS4 301 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 OR6C6A6NF89 314 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 ZNF587BE7ETH6 402 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 E9PLN8 166 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 CTDSP2O14595 271 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 TOXO94900 526 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 FARS2O95363 451 aaKnown RBP10.41□□□□□ -0.74
GGA3-217ENST00000583667 TTRP02766 147 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 MMP7P09237 267 aaPredicted RBP10.41□□□□□ -0.74
GGA3-217ENST00000583667 OCM2P0CE71 109 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 COX5BP10606 129 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 RAB3BP20337 219 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 CCL1P22362 96 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 CRYGSP22914 178 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 PPP5CP53041 499 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 MXD1Q05195 221 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 RAB35Q15286 201 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 FAM27D1Q5T7N8 215 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 FBXW9Q5XUX1 488 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 MZT2AQ6P582 158 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 C3P1Q6ZMU1 363 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 FAM214BQ7L5A3 538 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 NUFIP2Q7Z417 695 aaKnown RBP10.41□□□□□ -0.74
GGA3-217ENST00000583667 NR2C2APQ86WQ0 139 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 DOLPP1Q86YN1 238 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 PLPP7Q8NBV4 271 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 ASB5Q8WWX0 329 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 CMTM3Q96MX0 182 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 ATF6BQ99941 703 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 VKORC1Q9BQB6 163 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 PBOV1Q9GZY1 135 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 SLITRK2Q9H156 845 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 SP140LQ9H930 580 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 SMURF1Q9HCE7 757 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 SLC17A5Q9NRA2 495 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 ABRACLQ9P1F3 81 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 FOXJ3Q9UPW0 622 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 SLC22A13Q9Y226 551 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 CUBNO60494 3623 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 HIVEP2P31629 2446 aa10.41□□□□□ -0.74
GGA3-217ENST00000583667 HCFC1P51610 2035 aa10.4□□□□□ -0.74
GGA3-217ENST00000583667 A0A0U1RQV5 110 aa10.4□□□□□ -0.74
GGA3-217ENST00000583667 A0A1B0GTI1 187 aa10.4□□□□□ -0.74
GGA3-217ENST00000583667 MBD3L4A6NDZ8 208 aaPredicted RBP10.4□□□□□ -0.74
GGA3-217ENST00000583667 MBD3L3A6NE82 208 aaPredicted RBP10.4□□□□□ -0.74
GGA3-217ENST00000583667 MBD3L5A6NJ08 208 aaPredicted RBP10.4□□□□□ -0.74
GGA3-217ENST00000583667 SYNGR3O43761 229 aa10.4□□□□□ -0.74
GGA3-217ENST00000583667 WDR1O75083 606 aa10.4□□□□□ -0.74
GGA3-217ENST00000583667 KRT33AO76009 404 aa10.4□□□□□ -0.74
GGA3-217ENST00000583667 CD2P06729 351 aa10.4□□□□□ -0.74
GGA3-217ENST00000583667 ACSM4P0C7M7 580 aa10.4□□□□□ -0.74
GGA3-217ENST00000583667 EPXP11678 715 aa10.4□□□□□ -0.74
GGA3-217ENST00000583667 BMP4P12644 408 aa10.4□□□□□ -0.74
GGA3-217ENST00000583667 HOXB1P14653 301 aaPredicted RBP10.4□□□□□ -0.74
GGA3-217ENST00000583667 ZNF12P17014 697 aa10.4□□□□□ -0.74
GGA3-217ENST00000583667 FSTP19883 344 aa10.4□□□□□ -0.74
GGA3-217ENST00000583667 PTBP1P26599 531 aaKnown RBP eCLIP10.4□□□□□ -0.74
GGA3-217ENST00000583667 HSD11B1P28845 292 aa10.4□□□□□ -0.74
GGA3-217ENST00000583667 MPGP29372 298 aa10.4□□□□□ -0.74
GGA3-217ENST00000583667 TNFSF8P32971 234 aa10.4□□□□□ -0.74
GGA3-217ENST00000583667 THBS2P35442 1172 aa10.4□□□□□ -0.74
GGA3-217ENST00000583667 SCAND1P57086 179 aa10.4□□□□□ -0.74
GGA3-217ENST00000583667 ARF1P84077 181 aaKnown RBP10.4□□□□□ -0.74
GGA3-217ENST00000583667 TAF13Q15543 124 aa10.4□□□□□ -0.74
GGA3-217ENST00000583667 ACSF3Q4G176 576 aaPredicted RBP10.4□□□□□ -0.74
GGA3-217ENST00000583667 BCL2L15Q5TBC7 163 aa10.4□□□□□ -0.74
GGA3-217ENST00000583667 METAP1DQ6UB28 335 aaPredicted RBP10.4□□□□□ -0.74
GGA3-217ENST00000583667 DRAM2Q6UX65 266 aa10.4□□□□□ -0.74
GGA3-217ENST00000583667 SPATC1Q76KD6 591 aa10.4□□□□□ -0.74
GGA3-217ENST00000583667 LRRTM1Q86UE6 522 aa10.4□□□□□ -0.74
GGA3-217ENST00000583667 KRTAP1-3Q8IUG1 177 aa10.4□□□□□ -0.74
GGA3-217ENST00000583667 SKA3Q8IX90 412 aa10.4□□□□□ -0.74
GGA3-217ENST00000583667 CCDC36Q8IYA8 594 aa10.4□□□□□ -0.74
GGA3-217ENST00000583667 ZNF100Q8IYN0 542 aa10.4□□□□□ -0.74
GGA3-217ENST00000583667 PARP16Q8N5Y8 322 aa10.4□□□□□ -0.74
GGA3-217ENST00000583667 LILRB4Q8NHJ6 448 aa10.4□□□□□ -0.74
GGA3-217ENST00000583667 MBD3L2Q8NHZ7 208 aaPredicted RBP10.4□□□□□ -0.74
GGA3-217ENST00000583667 SPTSSAQ969W0 71 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms