RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 C22orf42Q6IC83 251 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 PLXDC2Q6UX71 529 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 DPY19L4Q7Z388 723 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 KRT77Q7Z794 578 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.95□□□□□ -0.98
SS18-221ENST00000582448 OR9K2Q8NGE7 335 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 OTOSQ8NHW6 89 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 SMAP2Q8WU79 429 aaPredicted RBP8.95□□□□□ -0.98
SS18-221ENST00000582448 ZNRF4Q8WWF5 429 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 ABTB1Q969K4 478 aaPredicted RBP8.95□□□□□ -0.98
SS18-221ENST00000582448 WDYHV1Q96HA8 205 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 EMC6Q9BV81 110 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 MROQ9BYG7 248 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 TTTY10Q9BZA0 68 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 B3GAT2Q9NPZ5 323 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 KLHL9Q9P2J3 617 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 B3GAT1Q9P2W7 334 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 NDRG3Q9UGV2 375 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 KCNG2Q9UJ96 466 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 POLR1DQ9Y2S0 133 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 FN1P02751 2386 aaKnown RBP8.95□□□□□ -0.98
SS18-221ENST00000582448 ARHGAP21Q5T5U3 1957 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 KIAA1549Q9HCM3 1950 aa8.95□□□□□ -0.98
SS18-221ENST00000582448 FLNAP21333 2647 aaKnown RBP8.94□□□□□ -0.98
SS18-221ENST00000582448 HEATR5AQ86XA9 2040 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 CD8B2A6NJW9 211 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 GABRPO00591 440 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 TRAF3IP2O43734 574 aaPredicted RBP8.94□□□□□ -0.98
SS18-221ENST00000582448 CXCL13O43927 109 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 ARL6IP5O75915 188 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 AQP8O94778 261 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 ZNF432O94892 652 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 CDRT1O95170 752 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 GOSR1O95249 250 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 LALBAP00709 142 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 PGA4P0DJD7 388 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 PGA3P0DJD8 388 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 ALOX5APP20292 161 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 MYL9P24844 172 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 LAP3P28838 519 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 GDI2P50395 445 aaKnown RBP8.94□□□□□ -0.98
SS18-221ENST00000582448 ZNF84P51523 738 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 P2RY4P51582 365 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 CLDN15P56746 228 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 CAMK2DQ13557 499 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 DCTN2Q13561 401 aaKnown RBP8.94□□□□□ -0.98
SS18-221ENST00000582448 EIF2B1Q14232 305 aaKnown RBP8.94□□□□□ -0.98
SS18-221ENST00000582448 ZNF846Q147U1 533 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 CDK5R1Q15078 307 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 BCL2A1Q16548 175 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 TEX30Q5JUR7 227 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 CARD17Q5XLA6 110 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 CD200R1LQ6Q8B3 271 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 CREB3L2Q70SY1 520 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 GGNQ86UU5 652 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.94□□□□□ -0.98
SS18-221ENST00000582448 OR2AJ1Q8NGZ0 328 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 OR10D3Q8NH80 312 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 TBC1D15Q8TC07 691 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 NSMAFQ92636 917 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 THRSPQ92748 146 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 GHSRQ92847 366 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 PIGTQ969N2 578 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 SMIM19Q96E16 107 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 PELI1Q96FA3 418 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 PIK3IP1Q96FE7 263 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 AJUBAQ96IF1 538 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 CCL19Q99731 98 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 MED18Q9BUE0 208 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 HDHD5Q9BXW7 423 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 KRTAP3-1Q9BYR8 98 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 PRRG4Q9BZD6 226 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 WDR12Q9GZL7 423 aaKnown RBP8.94□□□□□ -0.98
SS18-221ENST00000582448 C6orf62Q9GZU0 229 aaPredicted RBP8.94□□□□□ -0.98
SS18-221ENST00000582448 COMMD4Q9H0A8 199 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 SEC61A2Q9H9S3 476 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 CALHM2Q9HA72 323 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 PLGRKTQ9HBL7 147 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 SNTG1Q9NSN8 517 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 ACOXLQ9NUZ1 547 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 EMC3Q9P0I2 261 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 KLHL13Q9P2N7 655 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 MCTS1Q9ULC4 181 aaKnown RBP8.94□□□□□ -0.98
SS18-221ENST00000582448 COPS3Q9UNS2 423 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 RCE1Q9Y256 329 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 PEX16Q9Y5Y5 336 aa8.94□□□□□ -0.98
SS18-221ENST00000582448 MBD3L4A6NDZ8 208 aaPredicted RBP8.93□□□□□ -0.98
SS18-221ENST00000582448 MBD3L3A6NE82 208 aaPredicted RBP8.93□□□□□ -0.98
SS18-221ENST00000582448 MBD3L5A6NJ08 208 aaPredicted RBP8.93□□□□□ -0.98
SS18-221ENST00000582448 ZNF879B4DU55 563 aa8.93□□□□□ -0.98
SS18-221ENST00000582448 GPR171O14626 319 aa8.93□□□□□ -0.98
SS18-221ENST00000582448 SMAD9O15198 467 aaKnown RBP8.93□□□□□ -0.98
SS18-221ENST00000582448 OGG1O15527 345 aa8.93□□□□□ -0.98
SS18-221ENST00000582448 SLC43A1O75387 559 aa8.93□□□□□ -0.98
SS18-221ENST00000582448 ZNF254O75437 659 aa8.93□□□□□ -0.98
SS18-221ENST00000582448 GATBO75879 557 aaKnown RBP8.93□□□□□ -0.98
SS18-221ENST00000582448 OR8G3PP0DMU2 310 aa8.93□□□□□ -0.98
SS18-221ENST00000582448 GAAP10253 952 aa8.93□□□□□ -0.98
SS18-221ENST00000582448 CFL1P23528 166 aaKnown RBP8.93□□□□□ -0.98
SS18-221ENST00000582448 MAPK3P27361 379 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms