RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 DUX4L5P0CJ88 424 aa15.68■□□□□ 0.1
NDEL1-209ENST00000580738 DUX4L6P0CJ89 424 aa15.68■□□□□ 0.1
NDEL1-209ENST00000580738 DUX4L7P0CJ90 424 aa15.68■□□□□ 0.1
NDEL1-209ENST00000580738 EFNB2P52799 333 aa15.68■□□□□ 0.1
NDEL1-209ENST00000580738 ELF3P78545 371 aaPredicted RBP15.68■□□□□ 0.1
NDEL1-209ENST00000580738 KRTAP27-1Q3LI81 207 aa15.68■□□□□ 0.1
NDEL1-209ENST00000580738 ZBED5Q49AG3 693 aa15.68■□□□□ 0.1
NDEL1-209ENST00000580738 DUX4L9Q6RFH8 374 aaPredicted RBP15.68■□□□□ 0.1
NDEL1-209ENST00000580738 LYG1Q8N1E2 194 aa15.68■□□□□ 0.1
NDEL1-209ENST00000580738 PNKDQ8N490 385 aa15.68■□□□□ 0.1
NDEL1-209ENST00000580738 FAM156AQ8NDB6 213 aa15.68■□□□□ 0.1
NDEL1-209ENST00000580738 NPRL2Q8WTW4 380 aa15.68■□□□□ 0.1
NDEL1-209ENST00000580738 TLCD1Q96CP7 247 aa15.68■□□□□ 0.1
NDEL1-209ENST00000580738 ZNF583Q96ND8 569 aa15.68■□□□□ 0.1
NDEL1-209ENST00000580738 TRIM36Q9NQ86 728 aa15.68■□□□□ 0.1
NDEL1-209ENST00000580738 NECAP2Q9NVZ3 263 aa15.68■□□□□ 0.1
NDEL1-209ENST00000580738 C1orf123Q9NWV4 160 aa15.68■□□□□ 0.1
NDEL1-209ENST00000580738 VSX1Q9NZR4 365 aaPredicted RBP15.68■□□□□ 0.1
NDEL1-209ENST00000580738 DUX4Q9UBX2 424 aa15.68■□□□□ 0.1
NDEL1-209ENST00000580738 COL7A1Q02388 2944 aa15.68■□□□□ 0.1
NDEL1-209ENST00000580738 DNAH3Q8TD57 4116 aa15.68■□□□□ 0.1
NDEL1-209ENST00000580738 IGHV3OR15-7A0A075B7D8 119 aa15.67■□□□□ 0.1
NDEL1-209ENST00000580738 A0A087WUU8 490 aa15.67■□□□□ 0.1
NDEL1-209ENST00000580738 F5H5K5 113 aa15.67■□□□□ 0.1
NDEL1-209ENST00000580738 RNASEK-C17orf49H0YIS7 233 aa15.67■□□□□ 0.1
NDEL1-209ENST00000580738 FFAR1O14842 300 aa15.67■□□□□ 0.1
NDEL1-209ENST00000580738 NPFFO15130 113 aa15.67■□□□□ 0.1
NDEL1-209ENST00000580738 IFNA14P01570 189 aa15.67■□□□□ 0.1
NDEL1-209ENST00000580738 LRRC23Q53EV4 343 aaPredicted RBP15.67■□□□□ 0.1
NDEL1-209ENST00000580738 METAP1DQ6UB28 335 aaPredicted RBP15.67■□□□□ 0.1
NDEL1-209ENST00000580738 PTCHD4Q6ZW05 846 aa15.67■□□□□ 0.1
NDEL1-209ENST00000580738 PGAP1Q75T13 922 aa15.67■□□□□ 0.1
NDEL1-209ENST00000580738 GCSAMQ8N6F7 178 aa15.67■□□□□ 0.1
NDEL1-209ENST00000580738 LY6G5BQ8NDX9 201 aa15.67■□□□□ 0.1
NDEL1-209ENST00000580738 TSSK2Q96PF2 358 aa15.67■□□□□ 0.1
NDEL1-209ENST00000580738 ADAT1Q9BUB4 502 aaKnown RBP15.67■□□□□ 0.1
NDEL1-209ENST00000580738 DCTN6O00399 190 aa15.66■□□□□ 0.1
NDEL1-209ENST00000580738 SOCS2O14508 198 aa15.66■□□□□ 0.1
NDEL1-209ENST00000580738 LCATP04180 440 aa15.66■□□□□ 0.1
NDEL1-209ENST00000580738 SDHAP31040 664 aa15.66■□□□□ 0.1
NDEL1-209ENST00000580738 CENPAP49450 140 aa15.66■□□□□ 0.1
NDEL1-209ENST00000580738 KLRD1Q13241 179 aa15.66■□□□□ 0.1
NDEL1-209ENST00000580738 TRAM2Q15035 370 aa15.66■□□□□ 0.1
NDEL1-209ENST00000580738 C11orf91Q3C1V1 193 aa15.66■□□□□ 0.1
NDEL1-209ENST00000580738 CFAP77Q6ZQR2 320 aa15.66■□□□□ 0.1
NDEL1-209ENST00000580738 TMPRSS11FQ6ZWK6 438 aa15.66■□□□□ 0.1
NDEL1-209ENST00000580738 OFCC1Q8IZS5 231 aa15.66■□□□□ 0.1
NDEL1-209ENST00000580738 KLHDC1Q8N7A1 406 aa15.66■□□□□ 0.1
NDEL1-209ENST00000580738 OR5R1Q8NH85 324 aa15.66■□□□□ 0.1
NDEL1-209ENST00000580738 FNDC11Q9BVV2 318 aa15.66■□□□□ 0.1
NDEL1-209ENST00000580738 KAAG1Q9UBP8 84 aa15.66■□□□□ 0.1
NDEL1-209ENST00000580738 CD300LBA8K4G0 201 aa15.65■□□□□ 0.1
NDEL1-209ENST00000580738 GMDSO60547 372 aa15.65■□□□□ 0.1
NDEL1-209ENST00000580738 GRPP07492 148 aa15.65■□□□□ 0.1
NDEL1-209ENST00000580738 IFNA8P32881 189 aa15.65■□□□□ 0.1
NDEL1-209ENST00000580738 KDELR2P33947 212 aa15.65■□□□□ 0.1
NDEL1-209ENST00000580738 CDKN2AP42771 156 aaKnown RBP15.65■□□□□ 0.1
NDEL1-209ENST00000580738 MALLQ13021 153 aa15.65■□□□□ 0.1
NDEL1-209ENST00000580738 CYLC2Q14093 348 aaPredicted RBP15.65■□□□□ 0.1
NDEL1-209ENST00000580738 ZNF730Q6ZMV8 503 aa15.65■□□□□ 0.1
NDEL1-209ENST00000580738 MBOAT2Q6ZWT7 520 aa15.65■□□□□ 0.1
NDEL1-209ENST00000580738 LINC00346Q8IVM7 164 aa15.65■□□□□ 0.1
NDEL1-209ENST00000580738 RNF113BQ8IZP6 322 aaKnown RBP15.65■□□□□ 0.1
NDEL1-209ENST00000580738 Q8N7P7 452 aa15.65■□□□□ 0.1
NDEL1-209ENST00000580738 PLPP7Q8NBV4 271 aa15.65■□□□□ 0.1
NDEL1-209ENST00000580738 TSPEARQ8WU66 669 aa15.65■□□□□ 0.1
NDEL1-209ENST00000580738 ACOT11Q8WXI4 607 aaPredicted RBP15.65■□□□□ 0.1
NDEL1-209ENST00000580738 SLC22A4Q9H015 551 aa15.65■□□□□ 0.1
NDEL1-209ENST00000580738 NRIP3Q9NQ35 241 aa15.65■□□□□ 0.1
NDEL1-209ENST00000580738 FXYD1O00168 92 aa15.64■□□□□ 0.09
NDEL1-209ENST00000580738 PAHP00439 452 aa15.64■□□□□ 0.09
NDEL1-209ENST00000580738 LHBP01229 141 aa15.64■□□□□ 0.09
NDEL1-209ENST00000580738 ANOS1P23352 680 aa15.64■□□□□ 0.09
NDEL1-209ENST00000580738 EEF1B2P24534 225 aaKnown RBP15.64■□□□□ 0.09
NDEL1-209ENST00000580738 SAA4P35542 130 aa15.64■□□□□ 0.09
NDEL1-209ENST00000580738 KIR2DS4P43632 304 aa15.64■□□□□ 0.09
NDEL1-209ENST00000580738 SELENOWP63302 87 aa15.64■□□□□ 0.09
NDEL1-209ENST00000580738 GUCA2AQ02747 115 aa15.64■□□□□ 0.09
NDEL1-209ENST00000580738 TEX36Q5VZQ5 186 aa15.64■□□□□ 0.09
NDEL1-209ENST00000580738 MRPL21Q7Z2W9 205 aaKnown RBP15.64■□□□□ 0.09
NDEL1-209ENST00000580738 PHF21AQ96BD5 680 aa15.64■□□□□ 0.09
NDEL1-209ENST00000580738 CCL13Q99616 98 aa15.64■□□□□ 0.09
NDEL1-209ENST00000580738 PITX2Q99697 317 aa15.64■□□□□ 0.09
NDEL1-209ENST00000580738 ADA2Q9NZK5 511 aa15.64■□□□□ 0.09
NDEL1-209ENST00000580738 RAB21Q9UL25 225 aa15.64■□□□□ 0.09
NDEL1-209ENST00000580738 IER3IP1Q9Y5U9 82 aa15.64■□□□□ 0.09
NDEL1-209ENST00000580738 hCG_1807616A0A1W2PRN6 198 aa15.63■□□□□ 0.09
NDEL1-209ENST00000580738 MEIOCA2RUB1 952 aa15.63■□□□□ 0.09
NDEL1-209ENST00000580738 A6NLC8 198 aa15.63■□□□□ 0.09
NDEL1-209ENST00000580738 H3BUX3 64 aa15.63■□□□□ 0.09
NDEL1-209ENST00000580738 PTP4A3O75365 173 aa15.63■□□□□ 0.09
NDEL1-209ENST00000580738 PPP1R3DO95685 299 aa15.63■□□□□ 0.09
NDEL1-209ENST00000580738 MDH1P40925 334 aaKnown RBP15.63■□□□□ 0.09
NDEL1-209ENST00000580738 TRAP1Q12931 704 aaKnown RBP15.63■□□□□ 0.09
NDEL1-209ENST00000580738 GPR139Q6DWJ6 353 aa15.63■□□□□ 0.09
NDEL1-209ENST00000580738 SLC18B1Q6NT16 456 aa15.63■□□□□ 0.09
NDEL1-209ENST00000580738 C11orf87Q6NUJ2 197 aa15.63■□□□□ 0.09
NDEL1-209ENST00000580738 ERICH5Q6P6B1 374 aa15.63■□□□□ 0.09
NDEL1-209ENST00000580738 VTCN1Q7Z7D3 282 aa15.63■□□□□ 0.09
NDEL1-209ENST00000580738 TNFRSF14Q92956 283 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms