RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 CCDC58Q4VC31 144 aa9.72□□□□□ -0.85
CDK5RAP3-210ENST00000578733 ZNF684Q5T5D7 378 aa9.72□□□□□ -0.85
CDK5RAP3-210ENST00000578733 C20orf204Q6ZNR8 217 aa9.72□□□□□ -0.85
CDK5RAP3-210ENST00000578733 COLCA1Q6ZS62 124 aa9.72□□□□□ -0.85
CDK5RAP3-210ENST00000578733 RFPL4BQ6ZWI9 263 aa9.72□□□□□ -0.85
CDK5RAP3-210ENST00000578733 PGAP1Q75T13 922 aa9.72□□□□□ -0.85
CDK5RAP3-210ENST00000578733 MRPL21Q7Z2W9 205 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-210ENST00000578733 COMMD2Q86X83 199 aa9.72□□□□□ -0.85
CDK5RAP3-210ENST00000578733 ZNF101Q8IZC7 436 aa9.72□□□□□ -0.85
CDK5RAP3-210ENST00000578733 FBXL14Q8N1E6 418 aa9.72□□□□□ -0.85
CDK5RAP3-210ENST00000578733 FTMTQ8N4E7 242 aa9.72□□□□□ -0.85
CDK5RAP3-210ENST00000578733 NANOGP1Q8N7R0 232 aa9.72□□□□□ -0.85
CDK5RAP3-210ENST00000578733 CCDC54Q8NEL0 328 aa9.72□□□□□ -0.85
CDK5RAP3-210ENST00000578733 SYNPRQ8TBG9 265 aa9.72□□□□□ -0.85
CDK5RAP3-210ENST00000578733 SLC25A40Q8TBP6 338 aa9.72□□□□□ -0.85
CDK5RAP3-210ENST00000578733 HS3ST6Q96QI5 342 aa9.72□□□□□ -0.85
CDK5RAP3-210ENST00000578733 PBOV1Q9GZY1 135 aa9.72□□□□□ -0.85
CDK5RAP3-210ENST00000578733 COMMD4Q9H0A8 199 aa9.72□□□□□ -0.85
CDK5RAP3-210ENST00000578733 PAK1IP1Q9NWT1 392 aaPredicted RBP9.72□□□□□ -0.85
CDK5RAP3-210ENST00000578733 FAM206AQ9NX38 181 aa9.72□□□□□ -0.85
CDK5RAP3-210ENST00000578733 BABAM2Q9NXR7 383 aa9.72□□□□□ -0.85
CDK5RAP3-210ENST00000578733 ERVK-18Q9QC07 812 aa9.72□□□□□ -0.85
CDK5RAP3-210ENST00000578733 NUFIP1Q9UHK0 495 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-210ENST00000578733 OR52A1Q9UKL2 312 aa9.72□□□□□ -0.85
CDK5RAP3-210ENST00000578733 ROS1P08922 2347 aa9.72□□□□□ -0.85
CDK5RAP3-210ENST00000578733 A0A087WXM4 84 aa9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 A0A0U1RQV5 110 aa9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 PRR32B1ATL7 298 aa9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 HS3ST1O14792 307 aa9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 MAGEB4O15481 346 aaPredicted RBP9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 MTRF1O75570 445 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 SLC2A1P11166 492 aa9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 ZNF12P17014 697 aa9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 LOXP28300 417 aaPredicted RBP9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 EVX1P49640 407 aa9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 CCR9P51686 369 aa9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 KLF3P57682 345 aaPredicted RBP9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 HGFACQ04756 655 aa9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 TBCEQ15813 527 aaPredicted RBP9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 RSPO1Q2MKA7 263 aaPredicted RBP9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 GFOD2Q3B7J2 385 aa9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 TMEM244Q5VVB8 128 aa9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 AGAP6Q5VW22 663 aa9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 RPL22L1Q6P5R6 122 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 ZNF773Q6PK81 442 aa9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 CATSPERDQ86XM0 798 aa9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 KLBQ86Z14 1044 aa9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 GATAD2BQ8WXI9 593 aa9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 FCGR1BQ92637 280 aa9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 PELI1Q96FA3 418 aa9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 REEP6Q96HR9 211 aa9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 PLK3Q9H4B4 646 aa9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 ISG20L2Q9H9L3 353 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 UBTD1Q9HAC8 227 aa9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 PTTG3PQ9NZH4 202 aa9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 CGGBP1Q9UFW8 167 aaPredicted RBP9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 CLEC2DQ9UHP7 191 aa9.71□□□□□ -0.86
CDK5RAP3-210ENST00000578733 CHD3Q12873 2000 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 F8P00451 2351 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 TRBV2A0A0J9YWF9 115 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 A0A1B0GVI7 797 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 A0A1W2PPW3 197 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 GGT3PA6NGU5 568 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 TMEM212A6NML5 194 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 B9A039 149 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 E7EQL1 145 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 GPRIN2O60269 458 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 NGFP01138 241 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 OR4A8P0C604 315 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 RAC2P15153 192 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 ATP6V1B1P15313 513 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 THBS4P35443 961 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 SERPINF1P36955 418 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 LIPAP38571 399 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 DDOSTP39656 456 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 PSMB10P40306 273 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 SNRPD2P62316 118 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 BDH1Q02338 343 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 ALKBH1Q13686 389 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 IRF3Q14653 427 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 SPHARQ15513 63 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 ZMAT1Q5H9K5 638 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 OR2G6Q5TZ20 316 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 MBNL2Q5VZF2 373 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 FDX2Q6P4F2 183 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 FBXW12Q6X9E4 464 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 DOK3Q7L591 496 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 ZNF367Q7RTV3 350 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 ELMOD2Q8IZ81 293 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 MUC15Q8N387 334 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 ZNF676Q8N7Q3 588 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 ZNF611Q8N823 705 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 TSPAN14Q8NG11 270 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 OR8B12Q8NGG6 310 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 OR2G2Q8NGZ5 317 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 KLF14Q8TD94 323 aaPredicted RBP9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 TMEM171Q8WVE6 324 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 RORBQ92753 470 aa9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 MRPL24Q96A35 216 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-210ENST00000578733 OR2J1Q9GZK6 312 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms