RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 RAI1Q7Z5J4 1906 aaPredicted RBP8.88□□□□□ -0.99
SS18-210ENST00000578700 IGKV3D-15A0A087WSY6 115 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 DEFB108AA8MXU0 73 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 ZNF878C9JN71 531 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 ZFPL1O95159 310 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 ABHD16AO95870 558 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 RAB3BP20337 219 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 SELENOPP49908 381 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 PSMD7P51665 324 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 ZNF133P52736 654 aaPredicted RBP8.88□□□□□ -0.99
SS18-210ENST00000578700 PCBD1P61457 104 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 GRB2P62993 217 aaKnown RBP8.88□□□□□ -0.99
SS18-210ENST00000578700 PPP3R1P63098 170 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 MRPS34P82930 218 aaKnown RBP8.88□□□□□ -0.99
SS18-210ENST00000578700 BCL2L15Q5TBC7 163 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 LRFN4Q6PJG9 635 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 ZIC4Q8N9L1 334 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 GJC3Q8NFK1 279 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 RNF133Q8WVZ7 376 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 KCTD12Q96CX2 325 aaKnown RBP8.88□□□□□ -0.99
SS18-210ENST00000578700 ZNF845Q96IR2 970 aaPredicted RBP8.88□□□□□ -0.99
SS18-210ENST00000578700 C4orf45Q96LM5 186 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 ZFP3Q96NJ6 502 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 HS3ST6Q96QI5 342 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 PDCD1LG2Q9BQ51 273 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 OPN3Q9H1Y3 402 aaPredicted RBP8.88□□□□□ -0.99
SS18-210ENST00000578700 MOB1AQ9H8S9 216 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 RNF122Q9H9V4 155 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 TCF7L1Q9HCS4 588 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 EMC7Q9NPA0 242 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 FRRS1LQ9P0K9 344 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 ASH2LQ9UBL3 628 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 CMAHPQ9Y471 501 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 ZNF175Q9Y473 711 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 R4GMQ9 66 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 PMF1-BGLAPU3KQ54 211 aa8.88□□□□□ -0.99
SS18-210ENST00000578700 IGKV1D-43A0A0B4J1Z2 117 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 TMEM269A0A1B0GVZ9 245 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 SLC22A20A6NK97 555 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 ZNF724A8MTY0 619 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 PRR32B1ATL7 298 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 TMEM127O75204 238 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 SC5DO75845 299 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 FARS2O95363 451 aaKnown RBP8.87□□□□□ -0.99
SS18-210ENST00000578700 TGM6O95932 706 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 YES1P07947 543 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 UCHL1P09936 223 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 UBCP0CG48 685 aaKnown RBP8.87□□□□□ -0.99
SS18-210ENST00000578700 CRYGSP22914 178 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 CD40LGP29965 261 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 CDAP32320 146 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 NANOS3P60323 173 aaKnown RBP8.87□□□□□ -0.99
SS18-210ENST00000578700 TNK1Q13470 666 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 TMEM244Q5VVB8 128 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 VWA1Q6PCB0 445 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 C20orf204Q6ZNR8 217 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 ABHD12BQ7Z5M8 362 aaPredicted RBP8.87□□□□□ -0.99
SS18-210ENST00000578700 ZNF100Q8IYN0 542 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 RPS4Y2Q8TD47 263 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 ST7LQ8TDW4 575 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 ABHD3Q8WU67 409 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 TMEM171Q8WVE6 324 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 APH1AQ96BI3 265 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 ZNF775Q96BV0 537 aaPredicted RBP8.87□□□□□ -0.99
SS18-210ENST00000578700 STARD4Q96DR4 205 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 OR14A2Q96R54 314 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 AMELYQ99218 206 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 SLC30A2Q9BRI3 323 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 WACQ9BTA9 647 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 MRI1Q9BV20 369 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 GSX2Q9BZM3 304 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 SLCO5A1Q9H2Y9 848 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 SP140LQ9H930 580 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 GP6Q9HCN6 339 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 AKIP1Q9NQ31 210 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 GDF2Q9UK05 429 aaPredicted RBP8.87□□□□□ -0.99
SS18-210ENST00000578700 DHDHQ9UQ10 334 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 EMC9Q9Y3B6 208 aa8.87□□□□□ -0.99
SS18-210ENST00000578700 ABCA1O95477 2261 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 OR4C45A6NMZ5 311 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 RNF223E7ERA6 249 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 ZNF587BE7ETH6 402 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 MSTNO14793 375 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 TNFSF13O75888 250 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 CLEC2LP0C7M8 214 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 BMP4P12644 408 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 SRMP19623 302 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 TALDO1P37837 337 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 MMP16P51512 607 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 PPP5CP53041 499 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 ATP5J2P56134 94 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 SCRN3Q0VDG4 424 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 ECH1Q13011 328 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 INSL4Q14641 139 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 STK11Q15831 433 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 WDR38Q5JTN6 314 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 IDNKQ5T6J7 187 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 FAM27BQ5VT28 67 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 OTPQ5XKR4 325 aa8.86□□□□□ -0.99
SS18-210ENST00000578700 ALKBH2Q6NS38 261 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms