RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 SKA3Q8IX90 412 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 EXD3Q8N9H8 876 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 DMBX1Q8NFW5 382 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 MRPL38Q96DV4 380 aaKnown RBP12.98□□□□□ -0.33
SCARF1-209ENST00000576012 EDEM2Q9BV94 578 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 RTN4RQ9BZR6 473 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 IGFLR1Q9H665 355 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 MRPL22Q9NWU5 206 aaKnown RBP12.98□□□□□ -0.33
SCARF1-209ENST00000576012 HIF3AQ9Y2N7 669 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 OBSL1O75147 1896 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 VPS13AQ96RL7 3174 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 ZNF727A8MUV8 499 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 CXCR1P25024 350 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 ARRB1P49407 418 aaPredicted RBP12.98□□□□□ -0.33
SCARF1-209ENST00000576012 GSK3AP49840 483 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 RAB2AP61019 212 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 RPS4XP62701 263 aaKnown RBP12.98□□□□□ -0.33
SCARF1-209ENST00000576012 ACTBL2Q562R1 376 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 OR2M4Q96R27 311 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 GGACTQ9BVM4 153 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 OR8D2Q9GZM6 311 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 TMEM100Q9NV29 134 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 RFNGQ9Y644 331 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 UBE2CO00762 179 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 IGHV2-70P01814 119 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 HLA-DOBP13765 273 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 RAB5AP20339 215 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 MNX1P50219 401 aaPredicted RBP12.98□□□□□ -0.33
SCARF1-209ENST00000576012 EMP2P54851 167 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 TFF2Q03403 129 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 UNC119Q13432 240 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 EEF1A1P5Q5VTE0 462 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 DCXRQ7Z4W1 244 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 ANGPTL5Q86XS5 388 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 TIMM29Q9BSF4 260 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 KIR3DX1Q9H7L2 352 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 PNO1Q9NRX1 252 aaKnown RBP12.98□□□□□ -0.33
SCARF1-209ENST00000576012 CACFD1Q9UGQ2 172 aa12.98□□□□□ -0.33
SCARF1-209ENST00000576012 A0A0A6YYH2 397 aa12.97□□□□□ -0.33
SCARF1-209ENST00000576012 CXorf65A6NEN9 183 aa12.97□□□□□ -0.33
SCARF1-209ENST00000576012 A6NJ64 397 aa12.97□□□□□ -0.33
SCARF1-209ENST00000576012 F8VVB4 439 aa12.97□□□□□ -0.33
SCARF1-209ENST00000576012 F8VWA3 439 aa12.97□□□□□ -0.33
SCARF1-209ENST00000576012 SOCS1O15524 211 aa12.97□□□□□ -0.33
SCARF1-209ENST00000576012 JMJD7P0C870 316 aa12.97□□□□□ -0.33
SCARF1-209ENST00000576012 DEFA6Q01524 100 aa12.97□□□□□ -0.33
SCARF1-209ENST00000576012 C10orf91Q5T1B1 145 aa12.97□□□□□ -0.33
SCARF1-209ENST00000576012 IL34Q6ZMJ4 242 aa12.97□□□□□ -0.33
SCARF1-209ENST00000576012 ZNF383Q8NA42 475 aa12.97□□□□□ -0.33
SCARF1-209ENST00000576012 NAXEQ8NCW5 288 aa12.97□□□□□ -0.33
SCARF1-209ENST00000576012 ARL5BQ96KC2 179 aa12.97□□□□□ -0.33
SCARF1-209ENST00000576012 MEGF10Q96KG7 1140 aa12.97□□□□□ -0.33
SCARF1-209ENST00000576012 VSTM2LQ96N03 204 aa12.97□□□□□ -0.33
SCARF1-209ENST00000576012 SOX7Q9BT81 388 aa12.97□□□□□ -0.33
SCARF1-209ENST00000576012 C5orf66Q9H5L9 145 aa12.97□□□□□ -0.33
SCARF1-209ENST00000576012 PDE7BQ9NP56 450 aa12.97□□□□□ -0.33
SCARF1-209ENST00000576012 HHLA2Q9UM44 414 aa12.97□□□□□ -0.33
SCARF1-209ENST00000576012 PRAMEF26H0Y7S4 382 aa12.97□□□□□ -0.33
SCARF1-209ENST00000576012 SLC25A1P53007 311 aa12.97□□□□□ -0.33
SCARF1-209ENST00000576012 EGR3Q06889 387 aa12.97□□□□□ -0.33
SCARF1-209ENST00000576012 ZNF260Q3ZCT1 412 aa12.97□□□□□ -0.33
SCARF1-209ENST00000576012 AVL9Q8NBF6 648 aa12.97□□□□□ -0.33
SCARF1-209ENST00000576012 HSD17B11Q8NBQ5 300 aa12.97□□□□□ -0.33
SCARF1-209ENST00000576012 BSCL2Q96G97 398 aaPredicted RBP12.97□□□□□ -0.33
SCARF1-209ENST00000576012 HEBP2Q9Y5Z4 205 aa12.97□□□□□ -0.33
SCARF1-209ENST00000576012 TRANK1O15050 2925 aa12.97□□□□□ -0.33
SCARF1-209ENST00000576012 SMIM10L1P0DMW3 83 aa12.96□□□□□ -0.33
SCARF1-209ENST00000576012 RNH1P13489 461 aaKnown RBP12.96□□□□□ -0.33
SCARF1-209ENST00000576012 PPM1AP35813 382 aa12.96□□□□□ -0.33
SCARF1-209ENST00000576012 EIF2S3P41091 472 aaKnown RBP12.96□□□□□ -0.33
SCARF1-209ENST00000576012 KIAA0141Q14154 515 aaPredicted RBP12.96□□□□□ -0.33
SCARF1-209ENST00000576012 WBP2NLQ6ICG8 309 aa12.96□□□□□ -0.33
SCARF1-209ENST00000576012 SMIM10Q96HG1 83 aa12.96□□□□□ -0.33
SCARF1-209ENST00000576012 DGAT2Q96PD7 388 aa12.96□□□□□ -0.33
SCARF1-209ENST00000576012 HDAC8Q9BY41 377 aa12.96□□□□□ -0.33
SCARF1-209ENST00000576012 ELL3Q9HB65 397 aaPredicted RBP12.96□□□□□ -0.33
SCARF1-209ENST00000576012 WIF1Q9Y5W5 379 aa12.96□□□□□ -0.33
SCARF1-209ENST00000576012 PMS2P1A4D2B8 440 aa12.96□□□□□ -0.33
SCARF1-209ENST00000576012 XRCC2O43543 280 aa12.96□□□□□ -0.33
SCARF1-209ENST00000576012 KAT7O95251 611 aa12.96□□□□□ -0.33
SCARF1-209ENST00000576012 TXNDC12O95881 172 aa12.96□□□□□ -0.33
SCARF1-209ENST00000576012 INSM1Q01101 510 aaPredicted RBP12.96□□□□□ -0.33
SCARF1-209ENST00000576012 HGFACQ04756 655 aa12.96□□□□□ -0.33
SCARF1-209ENST00000576012 C1orf61Q13536 156 aa12.96□□□□□ -0.33
SCARF1-209ENST00000576012 MAMDC2Q7Z304 686 aaPredicted RBP12.96□□□□□ -0.33
SCARF1-209ENST00000576012 NT5CQ8TCD5 201 aa12.96□□□□□ -0.33
SCARF1-209ENST00000576012 ADAMTS17Q8TE56 1095 aa12.96□□□□□ -0.33
SCARF1-209ENST00000576012 CTHRC1Q96CG8 243 aa12.96□□□□□ -0.33
SCARF1-209ENST00000576012 SLC2A8Q9NY64 477 aa12.96□□□□□ -0.33
SCARF1-209ENST00000576012 UMAD1C9J7I0 102 aa12.96□□□□□ -0.34
SCARF1-209ENST00000576012 SCDO00767 359 aa12.96□□□□□ -0.34
SCARF1-209ENST00000576012 IFNA2P01563 188 aa12.96□□□□□ -0.34
SCARF1-209ENST00000576012 MT-ND4LP03901 98 aa12.96□□□□□ -0.34
SCARF1-209ENST00000576012 HEXBP07686 556 aa12.96□□□□□ -0.34
SCARF1-209ENST00000576012 SLC35E2P0CK97 266 aa12.96□□□□□ -0.34
SCARF1-209ENST00000576012 VSIG8P0DPA2 414 aa12.96□□□□□ -0.34
SCARF1-209ENST00000576012 OR3A2P47893 321 aa12.96□□□□□ -0.34
SCARF1-209ENST00000576012 SMAD4Q13485 552 aaKnown RBP12.96□□□□□ -0.34
SCARF1-209ENST00000576012 FAM166AQ6J272 317 aa12.96□□□□□ -0.34
SCARF1-209ENST00000576012 C15orf54Q8N8G6 183 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms